Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19p24f
         (716 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.        137   4e-34
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            29   0.14 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    26   1.3  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    25   2.3  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   3.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.4  
Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase pr...    23   7.2  

>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score =  137 bits (331), Expect = 4e-34
 Identities = 62/131 (47%), Positives = 82/131 (62%)
 Frame = +3

Query: 318 WVPACLSQRSIPPGALRVGTDADGDEIYAGRAHHEGDIVPAKVIPTKNACYISFGGEEVL 497
           W+P  +     PP  +  G D+DG +I+ GRAHH GD++PAKVIP K A Y+++GG+E L
Sbjct: 5   WIPTSV-HGPYPPHMVPGGVDSDGAQIFVGRAHHAGDLLPAKVIPDKTAAYVAYGGQETL 63

Query: 498 KDQFEVLVPSMFAWQFSTNGEVPPGAVEAGSTADGEKLYFGRVNHDGCTTPGKIHPSHAC 677
            +  EVLV     W  ++ G+VP GAV  G T+DGE LY GR  H+G  T GK+  SH C
Sbjct: 64  VEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSDGEILYVGRAYHEGSQTIGKVQCSHNC 123

Query: 678 CYYPFDGEERS 710
            Y P+ G E S
Sbjct: 124 IYIPYGGAEVS 134



 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 26/61 (42%), Positives = 35/61 (57%)
 Frame = +3

Query: 336 SQRSIPPGALRVGTDADGDEIYAGRAHHEGDIVPAKVIPTKNACYISFGGEEVLKDQFEV 515
           S   +P GA+  G  +DG+ +Y GRA+HEG     KV  + N  YI +GG EV    +EV
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVGRAYHEGSQTIGKVQCSHNCIYIPYGGAEVSVPTYEV 140

Query: 516 L 518
           L
Sbjct: 141 L 141


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 29.1 bits (62), Expect = 0.14
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 151  DPRTCTLLVPSFTTQCIRGIFIHHLPGRILCKWWKKPKRSLN 276
            DP      V  FTT  +  +F+ +LP R + KW  K KR+++
Sbjct: 2913 DPALYMSFVDGFTTATVGVLFLRNLP-RQISKWSGKVKRTVD 2953


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -2

Query: 601 PSAVEPASTAPGGTSPFV 548
           P    PA  APGG  PFV
Sbjct: 67  PGRSHPAEPAPGGNGPFV 84


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 515 TSTIHVRLAVLDKWRSPARRCRGWLHS*RGEAL 613
           T+T   R A   KW+   +R  GW  S + EA+
Sbjct: 493 TTTEEERNARYTKWKMAVQRSLGWAVSKKSEAM 525


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +1

Query: 199 IRGIFIHHLPGRILCKWWKKPK 264
           IR +F+H+LP  +L K  +K +
Sbjct: 333 IRSVFLHYLPAMLLMKRPRKTR 354


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 173 WCHRLLPNASGVFLSTTSRGGFCASGGRSRS 265
           WC +++P+     L TT    FC     S+S
Sbjct: 206 WCRKVIPSHQTGILGTTEGMIFCTEACFSQS 236


>Z49815-1|CAA89969.1|  237|Anopheles gambiae serine proteinase
           protein.
          Length = 237

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +3

Query: 396 IYAGRAHHEGDIVPAKVIPTKNACYISFGGEEVLKDQFEV 515
           +Y G  +  G ++  + I T   C +SF  +++L   ++V
Sbjct: 19  LYRGAFYCGGSLINDRYIVTAAHCVLSFTPQQLLAKLYDV 58


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,190
Number of Sequences: 2352
Number of extensions: 15462
Number of successful extensions: 41
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)