Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19p15r
(779 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4 |S... 44 2e-05
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom... 41 2e-04
SPAC926.06c |||leucine-rich repeat protein, unknown|Schizosaccha... 39 7e-04
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 39 0.001
SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22... 36 0.009
SPCC1739.11c |cdc11||SIN component scaffold protein Cdc11|Schizo... 31 0.14
SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces pom... 27 3.0
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 27 4.0
SPAC13G7.11 |||mitochondrial inner membrane protein|Schizosaccha... 27 4.0
SPAC1002.16c |||nicotinic acid plasma membrane transporter |Schi... 27 4.0
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo... 26 5.3
SPCC1235.12c |mug146||meiotically upregulated gene Mug46|Schizos... 26 7.0
SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28 |Schizo... 26 7.0
SPAC6F12.13c |fps1||geranyltranstransferase Fps1|Schizosaccharom... 25 9.2
SPCC417.04 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 25 9.2
SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces ... 25 9.2
SPBC839.11c |hut1||uridine diphosphate-N-acetylglucosamine trans... 25 9.2
SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|c... 25 9.2
>SPCC31H12.08c |ccr4|SPCC5E4.02c|CCR4-Not complex subunit Ccr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 690
Score = 44.0 bits (99), Expect = 2e-05
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = -2
Query: 769 LQSLYLSGLKLCNFRRDILLLKHLAVLDLSNNEIEKLPPEFGRMANLSELHLANNQLGV 593
L LY++ L +I LK+L +LD S N I+ +PPE G + L E+ L +N + V
Sbjct: 183 LTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPELGLLTELREVLLFDNMISV 241
Score = 42.3 bits (95), Expect = 7e-05
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Frame = -2
Query: 691 LDLSNNEIEKLPPEFGRMANLSELHLANNQLGVRGVVDWRWLLGPQI--TKTLKLLDLTS 518
LDL + + + + + L+EL++ +N L L P+I K L +LD +
Sbjct: 163 LDLGGIGLRNVSTDLFKFSFLTELYINHNNLT---------RLPPEIGKLKNLVILDASG 213
Query: 517 NKLGHLPKAIWKLEKLVTLKANDNMISRLPATIGRISTLRYFTISSNELQSL 362
N + +P + L +L + DNMIS +PA +G + L+ I N LQ +
Sbjct: 214 NSIKTIPPELGLLTELREVLLFDNMISVIPAELGTLFQLKILGIEGNPLQDV 265
Score = 37.9 bits (84), Expect = 0.002
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = -2
Query: 760 LYLSGLKLCNFRRDILLLKHLAVLDLSNNEIEKLPPEFGRMANLSELHLANNQL 599
L L G+ L N D+ L L +++N + +LPPE G++ NL L + N +
Sbjct: 163 LDLGGIGLRNVSTDLFKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSI 216
Score = 35.5 bits (78), Expect = 0.009
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -2
Query: 532 LDLTSNKLGHLPKAIWKLEKLVTLKANDNMISRLPATIGRISTLRYFTISSNELQSLPCS 353
LDL L ++ ++K L L N N ++RLP IG++ L S N ++++P
Sbjct: 163 LDLGGIGLRNVSTDLFKFSFLTELYINHNNLTRLPPEIGKLKNLVILDASGNSIKTIPPE 222
Query: 352 L 350
L
Sbjct: 223 L 223
>SPBC887.09c |||leucine-rich repeat protein Sog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 886
Score = 41.1 bits (92), Expect = 2e-04
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Frame = -2
Query: 778 PRTLQSLYLSGLKLCNFRRDIL--LLKHLAVLDLSNNEIEKLPPEFGRMANLSELHLANN 605
P +L LS L L + L + +A L L +N I+ + PE + L L++ +N
Sbjct: 26 PENALTLDLSHLNLRELPYEQLERIQGRIARLALGHNFIKSIGPEILKFTRLRYLNIRSN 85
Query: 604 QLGVRGVVDWRWLLGPQITKTLKLLDLTSNKLGHLPKAIWKLEKLVTLKANDNMISRLPA 425
L R + L ++L++LD++ NK+ LP++ L L L + N + LP
Sbjct: 86 VL--REFPESLCRL-----ESLEILDISRNKIKQLPESFGALMNLKVLSISKNRLFELPT 138
Query: 424 TIGRISTLRYFTISSNEL 371
I + L I +N +
Sbjct: 139 YIAHMPNLEILKIENNHI 156
>SPAC926.06c |||leucine-rich repeat protein,
unknown|Schizosaccharomyces pombe|chr 1|||Manual
Length = 621
Score = 39.1 bits (87), Expect = 7e-04
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Frame = -2
Query: 766 QSLYL--SGLKLCNFRRDILL-LKHLAVLDLSNNEIEKLPPEFGRMANLSELHLANNQL 599
Q LYL S KL + +++ L L+ L LDLS NE+ ++P G + L L+LA+N++
Sbjct: 333 QLLYLRCSSCKLKSIPKNVFLSLQSLVSLDLSGNELTEIPYALGELPQLCSLNLASNKI 391
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 38.7 bits (86), Expect = 0.001
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 4/148 (2%)
Frame = -2
Query: 709 LKHLAVLDLSNNEIEKLPPEFGRMANLSELHLANNQL-GVRGVVDWRWLLGPQITKTLKL 533
LKHL LDL N I+ P E ++++L ++L++N L ++ V L I++ +
Sbjct: 728 LKHLVHLDLHANNIKIFPEEVWQVSSLKVVNLSSNILEKIKLPVATSKKLTRTISQLKIM 787
Query: 532 LDLTSNKLGHLPKAIWKLEKLVTLKANDNMISRLPAT-IGRISTLRYFTISSNELQSLPC 356
L+ N + L + + + L DN + T + L+ +S N L +P
Sbjct: 788 RTLSGNPVSSLSSQEFVMPTVEELYLVDNRLGNDCFTALEYFKCLKVLNLSYNYLTEIPS 847
Query: 355 SLMQ--CRLEYIDISSNKFDNKQNNSTS 278
Q L+++ +S N+ N +ST+
Sbjct: 848 KFFQNFSDLKHLFVSGNELANLSISSTA 875
Score = 35.5 bits (78), Expect = 0.009
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 15/210 (7%)
Frame = -2
Query: 769 LQSLYLSGLKLCN-FRRDILLLKHLAVLDLSNNEIEKLPPEFGRMANLSELHLANNQLGV 593
L+ LYL L N ++I LLK+L +DLS N I + L+ +++A N L
Sbjct: 573 LKHLYLQFNDLSNRLPQEIGLLKNLETIDLSYNAITNI-ASLSECPKLNSINVACNLLSF 631
Query: 592 -------RGVVDWRW----LLGPQIT-KTLKLLDLTSNKL-GHLPKAIWKLEKLVTLKAN 452
+D+ + + P + L D++ KL G I L + T+K N
Sbjct: 632 YEYSNPSATFIDFSFCPLTTIDPAFSYSNLVYFDISHAKLIGLKDSVIETLVNVETVKVN 691
Query: 451 DNMISRLPATIGRISTLRYFTISSNELQSLPCSLMQCR-LEYIDISSNKFDNKQNNSTSD 275
N + + I + L+Y + ++ E+ + +L + + L ++D+ + NN
Sbjct: 692 YNHFTSISDAISAMQNLKYLSCTNCEMSYVSPNLGKLKHLVHLDLHA-------NNIKIF 744
Query: 274 QYSPWQFYVGSLVHLSAKIILKHKIHYASN 185
WQ +V+LS+ I+ K K+ A++
Sbjct: 745 PEEVWQVSSLKVVNLSSNILEKIKLPVATS 774
Score = 34.7 bits (76), Expect = 0.015
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = -2
Query: 769 LQSLYLSGLKLCNFRRDILLLKHLAVLDLSNNEIEKLPPEFGRMANLSEL 620
L++LY +G +L +F ++ L K L LD+S N ++ L E +L++L
Sbjct: 879 LETLYANGNRLSSFPKNEALSKSLRFLDISTNNLQNLAVEKAEKKSLTKL 928
>SPAC4A8.12c |sds22||protein phosphatase regulatory subunit Sds22
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 35.5 bits (78), Expect = 0.009
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = -2
Query: 769 LQSLYLSGLKLCNFRRDILLLKHLAVLDLSNNEIEKLPPEFGRMANLSELHLANNQL 599
L+ LY+S L +F I +L++L +LD+SNN I+ L G + NL EL +NN+L
Sbjct: 217 LRELYVSHNGLTSFS-GIEVLENLEILDVSNNMIKHLSYLAG-LKNLVELWASNNEL 271
>SPCC1739.11c |cdc11||SIN component scaffold protein
Cdc11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1045
Score = 31.5 bits (68), Expect = 0.14
Identities = 34/131 (25%), Positives = 53/131 (40%)
Frame = -2
Query: 691 LDLSNNEIEKLPPEFGRMANLSELHLANNQLGVRGVVDWRWLLGPQITKTLKLLDLTSNK 512
L+ N + L F + NL L ++ NQL L G L+ L + SN
Sbjct: 651 LNAVENRLSSLT-SFSNLLNLQYLDISYNQL--------EDLTGLSSLIHLRELKVDSNH 701
Query: 511 LGHLPKAIWKLEKLVTLKANDNMISRLPATIGRISTLRYFTISSNELQSLPCSLMQCRLE 332
L L I L+ L+ L A +N I L T + L + +NE++ + L
Sbjct: 702 LWSLD-GIQHLDGLLKLSACNNRIKELSFTNSNLHRLEELLLGNNEIEEIEEISSLQNLM 760
Query: 331 YIDISSNKFDN 299
+ + +NK N
Sbjct: 761 VLQLDNNKLTN 771
Score = 25.8 bits (54), Expect = 7.0
Identities = 28/93 (30%), Positives = 44/93 (47%)
Frame = -2
Query: 709 LKHLAVLDLSNNEIEKLPPEFGRMANLSELHLANNQLGVRGVVDWRWLLGPQITKTLKLL 530
L L L NN I++L + L EL L NN+ + + + L + L +L
Sbjct: 711 LDGLLKLSACNNRIKELSFTNSNLHRLEELLLGNNE--IEEIEEISSL------QNLMVL 762
Query: 529 DLTSNKLGHLPKAIWKLEKLVTLKANDNMISRL 431
L +NKL +L KA + L L+ ++N I +L
Sbjct: 763 QLDNNKLTNL-KASQPMIHLRILRISNNAIHQL 794
>SPBC31F10.07 |||cortical component Lsb5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 304
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -2
Query: 463 LKANDNMISRLPATIGRISTLRYFTISSNELQSLPCSLMQCRLEYIDISSNKFDNKQNNS 284
LKAND +++ + A + S ++ S S + R YI SS+ N Q +
Sbjct: 230 LKANDEIVTAIDAFKEKCSENSDYSSDSGSYSSSYSRHLDDRASYISRSSSGGSNAQRSE 289
Query: 283 TSDQYSPW 260
D +P+
Sbjct: 290 DLDVNNPF 297
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 41 EIVIKNYSSKIVFEVIFFIY*MCVIYYWCSTHTHVSIVQKLNKC 172
E++ KNY K+V ++F + S TH +V+ L KC
Sbjct: 294 EVIPKNYIQKVVLNILFLL---------LSIDTHSDVVELLFKC 328
>SPAC13G7.11 |||mitochondrial inner membrane
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 269
Score = 26.6 bits (56), Expect = 4.0
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = -2
Query: 544 TLKLLDLTSNKLGHLPKAIWKLEKLVTLKANDNMISRLPATIGRISTLRYFTISSNELQS 365
TL+ + + + PK IWKLEK ++ K +SR A + + + LQS
Sbjct: 137 TLRTAQILKQQALNQPKCIWKLEKHIS-KPKLLNLSRAQADLKGEEFFVQAVVRLHTLQS 195
Query: 364 LPCSLMQCRLEYIDISS 314
L ++E DI +
Sbjct: 196 LRTDKGSPKIEKPDIEN 212
>SPAC1002.16c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 499
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -2
Query: 100 INKEYDLKDYFRTVVFNNNLSVVEFECYFCS 8
I + + Y + NN SV+ F CY CS
Sbjct: 357 IGNIFPIVGYILLLACQNNKSVLYFACYLCS 387
>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1309
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -2
Query: 322 ISSNKFDNKQNNSTSDQYSPWQFYVGSLVHLSAKI-ILKHKIHYASNIIPWTLVEFLD 152
+S+ K +K+NN + P FY G LV +L+ H+ S TLVEF D
Sbjct: 1032 VSNLKIIDKKNNEPDENILPLHFY-GELVKSPQGCEVLESSGHFES--FMGTLVEFYD 1086
>SPCC1235.12c |mug146||meiotically upregulated gene
Mug46|Schizosaccharomyces pombe|chr 3|||Manual
Length = 311
Score = 25.8 bits (54), Expect = 7.0
Identities = 18/95 (18%), Positives = 46/95 (48%)
Frame = -2
Query: 355 SLMQCRLEYIDISSNKFDNKQNNSTSDQYSPWQFYVGSLVHLSAKIILKHKIHYASNIIP 176
S +QC+L + +SS++ + N+ + ++ Y+ + S+ ++ K +H +
Sbjct: 45 SEVQCKLTHF-LSSSENSSSVRNTRTHKFKQLLHYI-FFSNRSSSVLGKQNVHNSQT--- 99
Query: 175 WTLVEFLDNANMCVCGAPVVNYTHSINKEYDLKDY 71
L + + C A +NY+ ++NK+ + + +
Sbjct: 100 ------LGSVSFCEKHAIDINYSENVNKQLNFESH 128
>SPBC19C2.01 |cdc28|prp8|ATP-dependent RNA helicase Cdc28
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1055
Score = 25.8 bits (54), Expect = 7.0
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 679 NNEIEKLP-PEFGRMANLSELHLANNQLGVRGVVDWRWLLGPQITKTLKLLDL 524
NNE++ + PE R NL+ + L LG+ ++D+ ++ P ++ L+L
Sbjct: 763 NNELDMVTSPEIQR-TNLTNIVLLLKSLGINNLLDFDFMDAPPPETLMRSLEL 814
>SPAC6F12.13c |fps1||geranyltranstransferase
Fps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -2
Query: 121 VVNYTHSINKEYDLKDYFRTVVFNNNL 41
+VNY +IN D+ ++++ +F+N L
Sbjct: 21 IVNYLKTINIPDDVTEWYKNSLFHNTL 47
>SPCC417.04 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 180
Score = 25.4 bits (53), Expect = 9.2
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -2
Query: 322 ISSNKFDNKQNNSTSDQYSPWQFYVGSLVHLSAKIILKHKIHYASNIIPWTLVEFLDNAN 143
+SS + + K++ S + + F+ GSL ILK + II + FL + N
Sbjct: 15 LSSKRIEVKKSFCCSSEGPLFYFFFGSLTFSIEVSILKETLEKPLQIITFLFFSFLTSFN 74
>SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 14 KIALKFNHTEIVIKNYSSKIVFEVIFFIY 100
K+ + +HTE +I YS +V ++ ++Y
Sbjct: 237 KVEIFNSHTEYIITWYSLSVVSAIMLYVY 265
>SPBC839.11c |hut1||uridine diphosphate-N-acetylglucosamine
transporter Hut1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 322
Score = 25.4 bits (53), Expect = 9.2
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +3
Query: 270 Y*SDVELFCLLSNLFEDMSMYSSLHCIRLHGKDCSSLLEIVKYLNVEMRPIVAGSLEIIL 449
Y S + + LS+ F SM+ + + GK C L I ++ V R I+
Sbjct: 79 YFSSIAISASLSSYFGYASMFHLSYPTVILGKSCKLLPVIALHVFVYKRKFPPHKYLIVT 138
Query: 450 SFAFRVTNFSSFQ 488
V+ FS FQ
Sbjct: 139 MITAGVSIFSYFQ 151
>SPCC4B3.04c |nte1||lysophospholipase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1316
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 330 TLTYPQINLTTSKIILRQINILRGN 256
+L++P + L SKII ++N+L N
Sbjct: 746 SLSHPAVGLQLSKIIANRMNLLLNN 770
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,152,137
Number of Sequences: 5004
Number of extensions: 65739
Number of successful extensions: 204
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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