Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19p15r
(779 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 36 4e-04
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 23 2.4
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 23 4.2
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 23 4.2
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.7
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 9.7
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 9.7
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 9.7
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 21 9.7
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 35.9 bits (79), Expect = 4e-04
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 19/156 (12%)
Frame = -2
Query: 700 LAVLDLSNNEIEKLPPEFGRMANLSELHLANNQL------GVRGV--VDWRWLLGPQI-- 551
L LDLS NE+ +P +A L L L N++ R + + L+G I
Sbjct: 433 LKELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGSFRNLDQLTGLRLIGNDIGN 492
Query: 550 --------TKTLKLLDLTSNKLGHLPK-AIWKLEKLVTLKANDNMISRLPATIGRISTLR 398
L++L+L NK+ H+ + A + +L ++ + N +S + I++L
Sbjct: 493 LSRGMLWDLPNLQILNLARNKVQHVERYAFERNMRLEAIRLDGNFLSDINGVFTSIASLL 552
Query: 397 YFTISSNELQSLPCSLMQCRLEYIDISSNKFDNKQN 290
+S N ++ + + L+++DI N ++ N
Sbjct: 553 LLNLSENHIEWFDYAFIPGNLKWLDIHGNFIESLGN 588
Score = 35.1 bits (77), Expect = 7e-04
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Frame = -2
Query: 760 LYLSGLKLCNFRRD---ILLLKHLAVLDLSNNEIEKLPPE-FGRMANLSELHLANNQLGV 593
L L+G +L + R D L L L VL+LS N + + F + L L L NN +
Sbjct: 314 LNLAGNRLGSDRVDETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDR 373
Query: 592 RGVVDWRWLLGPQITKTLKLLDLTSNKLG-HLPKAIWKLEKLVTLKANDNMISRLPATIG 416
++ L TL+L D +G L ++ L +L TL N + S P
Sbjct: 374 ---IESNAFLPLYNLHTLELSDNKLRTVGAQLFNGLFVLNRL-TLSGNA-IASIDPLAFR 428
Query: 415 RISTLRYFTISSNELQSLPCSLMQ-CRLEYIDISSNKFDNKQNNS 284
S L+ +S NEL S+P +L L+ +D+ N+ N N S
Sbjct: 429 NCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENRISNFYNGS 473
Score = 28.7 bits (61), Expect = 0.064
Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 27/172 (15%)
Frame = -2
Query: 700 LAVLDLSNNEIEKLPPE--FGRMANLSELHLANNQL------GVRGVVDWRWLLG----- 560
+ +LDLS NEI +L + L ELHL N + + G+ R
Sbjct: 214 IRILDLSRNEITRLQENSPLLDLRQLQELHLQRNAIVEIAGDALTGLTVLRTFNASYNSL 273
Query: 559 ---PQ----ITKTLKLLDLTSNKLGHLPKAIW-KLEKLVTLKANDNMI--SRLPAT--IG 416
P+ T+ L+ + L N L LPK I+ +LE+L+ L N + R+ T +G
Sbjct: 274 DSLPEGLFASTRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAGNRLGSDRVDETTFLG 333
Query: 415 RISTLRYFTISSNELQSLPCSLMQ--CRLEYIDISSNKFDNKQNNSTSDQYS 266
I L +S N L + + + L+ +D+ +N D ++N+ Y+
Sbjct: 334 LI-RLIVLNLSYNMLTHIDARMFKDLFFLQILDLRNNSIDRIESNAFLPLYN 384
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 23.4 bits (48), Expect = 2.4
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 122 WCSTHTHVSIVQKLNK 169
W S H+S+ QKL K
Sbjct: 156 WHSPEAHISVAQKLQK 171
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 772 TLQSLYLSGLKLCNFRRDILLL 707
T +SLYLS + L + RD++L+
Sbjct: 324 TRRSLYLSDIPLHDATRDLVLM 345
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -2
Query: 772 TLQSLYLSGLKLCNFRRDILLL 707
T +SLYLS + L + RD++L+
Sbjct: 324 TRRSLYLSDIPLHDATRDLVLM 345
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 9.7
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -2
Query: 316 SNKFDNKQNNSTSDQ 272
S+K DN+ NN +DQ
Sbjct: 435 SSKSDNQNNNQHNDQ 449
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 9.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 315 QINLTTSKIILRQINILRGNFMS 247
+IN+ K + +Q+N RGN +S
Sbjct: 495 RINIERMKQVYQQLNKYRGNGVS 517
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 21.4 bits (43), Expect = 9.7
Identities = 5/16 (31%), Positives = 14/16 (87%)
Frame = +1
Query: 181 LCWMHNVFYVLILFLH 228
+ ++H++F +LI+F++
Sbjct: 7 IMFIHSIFLILIIFIY 22
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 21.4 bits (43), Expect = 9.7
Identities = 5/16 (31%), Positives = 14/16 (87%)
Frame = +1
Query: 181 LCWMHNVFYVLILFLH 228
+ ++H++F +LI+F++
Sbjct: 7 IMFIHSIFLILIIFIY 22
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/27 (25%), Positives = 15/27 (55%)
Frame = -3
Query: 87 MTSKTILEL*FLITISVWLNLSAIFAH 7
+ K +L L+T+S+W+ + + H
Sbjct: 311 LLGKYLLFTMILVTLSIWITVCVLNVH 337
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,995
Number of Sequences: 438
Number of extensions: 4433
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -