Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19p15f
         (761 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   3.1  
DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    23   4.1  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   9.4  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   9.4  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   9.4  

>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 387 SETEYFILHFSSLNKTGTKYRVKSIKQVFVKY 482
           +ET+  I+  S ++      ++  I Q F+KY
Sbjct: 95  NETDQLIVECSPISDANVHIKISKIFQCFMKY 126


>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 526 YGGSSNLIVDFPSFIYLTNTCLIDFTRYLVPVL 428
           Y   S+   D   ++Y+ + CL  F+  + P+L
Sbjct: 295 YAQESDYYPDLNEWLYILSGCLYYFSTTINPIL 327


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 524 WGFLKPNCRFSFIYILNK 471
           W F  PN  F  ++I N+
Sbjct: 661 WNFTIPNMYFKDVFIYNR 678


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 524 WGFLKPNCRFSFIYILNK 471
           W F  PN  F  ++I N+
Sbjct: 661 WNFTIPNMYFKDVFIYNR 678


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 591 ITGDEKALHLSPLSSLSVTAKNNAPVKLVIS 683
           I  ++K ++LSP + +    KNN   K  +S
Sbjct: 18  ILKNDKRIYLSPRTPIKNVYKNNIETKNQLS 48


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,226
Number of Sequences: 438
Number of extensions: 3900
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23789892
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)