Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19p12r
         (909 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    44   3e-06
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    40   4e-05
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           40   4e-05

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 43.6 bits (98), Expect = 3e-06
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 2/117 (1%)
 Frame = -3

Query: 826 IYYYMFSYDGGRNLVKVSRGINAPGVAHADELGYIFSIK-SLSNKTSPEDQLMVDRMTTM 650
           +YYY F+     NL          GV H DE+ Y+F    + S K S +++ +  RM   
Sbjct: 474 VYYYFFTQRTSTNLWG-----EWMGVLHGDEVEYVFGHPLNKSLKYSDKERDLSLRMILY 528

Query: 649 WTNFAKFGDPTPETTELLPIKWDPITKDSYNYLKIDSVLT-LGNRPYKERMTLWDLF 482
           ++ FA  G PT E +E     W   ++D   Y   D+  T LG  P       W+ F
Sbjct: 529 FSEFAYLGKPTKEDSE-----WPSYSRDEPKYFIFDAEKTGLGKGPRTTYCAFWNEF 580


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 39.5 bits (88), Expect = 4e-05
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -3

Query: 826 IYYYMFSYDGGRNLVKVSRGI-NAPGVAHADELGYIFSIKSLSNKTSPEDQLMVDRMTTM 650
           +++Y ++Y G  ++ ++  G  N  GV HAD+   +     L++ T+  D  M   +   
Sbjct: 436 VWFYYYTYKGAHSISEIMSGTSNKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDF 495

Query: 649 WTNFAKFGDPTPETTE 602
           W +F   G P   + +
Sbjct: 496 WVSFVNNGVPNVNSVQ 511


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 39.5 bits (88), Expect = 4e-05
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = -3

Query: 826 IYYYMFSYDGGRNLVKVSRGI-NAPGVAHADELGYIFSIKSLSNKTSPEDQLMVDRMTTM 650
           +++Y ++Y G  ++ ++  G  N  GV HAD+   +     L++ T+  D  M   +   
Sbjct: 436 VWFYYYTYKGAHSISEIMSGTSNKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDF 495

Query: 649 WTNFAKFGDPTPETTE 602
           W +F   G P   + +
Sbjct: 496 WVSFVNNGVPNVNSVQ 511


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,722
Number of Sequences: 438
Number of extensions: 5276
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)