Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19p12f
         (749 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0651 + 5622786-5624165,5624720-5624881,5624984-5625173,562...    29   3.0  
05_05_0125 - 22561972-22562028,22562318-22562416,22562496-225626...    28   6.9  
02_05_0701 + 31022485-31022648,31023569-31023611,31023712-310237...    28   9.1  

>08_01_0651 +
           5622786-5624165,5624720-5624881,5624984-5625173,
           5625253-5625284
          Length = 587

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
 Frame = +2

Query: 476 LLPIKWDPITKDSYNY----LKIDSVLTLGNRPYKERMTLWDLFYKLNEKKQKYYDESNE 643
           + P+KW P+ KDS +     + ID  L +G+      +  +   Y      + Y+D+ + 
Sbjct: 313 ITPMKWVPVLKDSGSLVTGSIMIDDSLLIGDSKKGHEVDGFSSDYSYGGSSEDYFDDLSS 372

Query: 644 D-SF*YLYN 667
           D S  Y YN
Sbjct: 373 DISDDYDYN 381


>05_05_0125 -
           22561972-22562028,22562318-22562416,22562496-22562624,
           22563312-22563355,22563570-22563642,22563791-22563877,
           22563985-22564069,22565460-22565533,22565612-22566192,
           22566275-22568270
          Length = 1074

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +2

Query: 545 TLGNRPYKERMTLWDLFYKLNEKKQKYYDESNEDSF 652
           +LG  P   R  LW++ ++++   Q+   +S+ED F
Sbjct: 761 SLGLSPSSRRWRLWNIPFRISRSLQRSNSDSSEDIF 796


>02_05_0701 +
           31022485-31022648,31023569-31023611,31023712-31023777,
           31024007-31024062,31024091-31024190,31024290-31024472,
           31024953-31025001,31025089-31025169,31025209-31025268,
           31025394-31025514,31025612-31025693,31025783-31025868,
           31026011-31026111,31026246-31026387,31026488-31026638,
           31026710-31026937
          Length = 570

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +2

Query: 446 FGDPTPETTELLPIKWDPITKDSYNYLKIDSVLTLGNRPYKERMTLW 586
           F D   E   L  +  D ++ ++    K+DS++ LGN    ER  LW
Sbjct: 80  FTDSLSELGNLNNVNDDIVSSENTIIRKVDSLVVLGNLTEFERGVLW 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,992,594
Number of Sequences: 37544
Number of extensions: 339088
Number of successful extensions: 719
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)