Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19p12f
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    45   7e-07
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    40   3e-05
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           40   3e-05
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    24   1.3  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           23   3.1  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           23   3.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   5.3  

>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 45.2 bits (102), Expect = 7e-07
 Identities = 39/139 (28%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
 Frame = +2

Query: 185 DFVYIHPIQRTINKFIEGHARNIYYYMFSYDGGRNLVKVSRGINAPGVAHADELGYIFSI 364
           D+ +I P       F +     +YYY F+     NL          GV H DE+ Y+F  
Sbjct: 453 DYFFICPSIHFAQLFAD-RGMKVYYYFFTQRTSTNLWG-----EWMGVLHGDEVEYVFGH 506

Query: 365 K-SLSNKTSPEDQLMVDRMTTMWTNFAKFGDPTPETTELLPIKWDPITKDSYNYLKIDSV 541
             + S K S +++ +  RM   ++ FA  G PT E +E     W   ++D   Y   D+ 
Sbjct: 507 PLNKSLKYSDKERDLSLRMILYFSEFAYLGKPTKEDSE-----WPSYSRDEPKYFIFDAE 561

Query: 542 LT-LGNRPYKERMTLWDLF 595
            T LG  P       W+ F
Sbjct: 562 KTGLGKGPRTTYCAFWNEF 580


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 39.5 bits (88), Expect = 3e-05
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 251 IYYYMFSYDGGRNLVKVSRGI-NAPGVAHADELGYIFSIKSLSNKTSPEDQLMVDRMTTM 427
           +++Y ++Y G  ++ ++  G  N  GV HAD+   +     L++ T+  D  M   +   
Sbjct: 436 VWFYYYTYKGAHSISEIMSGTSNKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDF 495

Query: 428 WTNFAKFGDPTPETTE 475
           W +F   G P   + +
Sbjct: 496 WVSFVNNGVPNVNSVQ 511


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 39.5 bits (88), Expect = 3e-05
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 251 IYYYMFSYDGGRNLVKVSRGI-NAPGVAHADELGYIFSIKSLSNKTSPEDQLMVDRMTTM 427
           +++Y ++Y G  ++ ++  G  N  GV HAD+   +     L++ T+  D  M   +   
Sbjct: 436 VWFYYYTYKGAHSISEIMSGTSNKYGVCHADDAYMVVDTPFLASTTTTNDIKMQKVLIDF 495

Query: 428 WTNFAKFGDPTPETTE 475
           W +F   G P   + +
Sbjct: 496 WVSFVNNGVPNVNSVQ 511


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/56 (25%), Positives = 23/56 (41%)
 Frame = -2

Query: 325 PRCINTTTHFYQIPPTVIREHVIVNITSMSFNKFIDSPLNGMNVNKILAFHGFCDA 158
           P   NT    Y+I P +  EH++V     +    +  PL+    +  +    FC A
Sbjct: 239 PDPYNTKFFRYRITPELYSEHLVVPEIEDNLETSLFRPLSSEATDLRMGVASFCKA 294


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 235 FNKFIDSPLNGMNVNKILAFH 173
           F  F+D+PLN +  NK    H
Sbjct: 65  FTAFMDTPLNELPANKRFQAH 85


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 235 FNKFIDSPLNGMNVNKILAFH 173
           F  F+D+PLN +  NK    H
Sbjct: 65  FTAFMDTPLNELPANKRFQAH 85


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 156 RDFFEDNYLCGVNFDRY 106
           +  FE+    G+NFD+Y
Sbjct: 163 KSLFENGVEIGINFDKY 179


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,803
Number of Sequences: 438
Number of extensions: 4124
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)