Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19p04r
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical... 297 6e-81
U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate... 295 3e-80
U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related... 31 1.4
U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related... 31 1.4
AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-relat... 31 1.4
Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ... 30 2.4
U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical pr... 29 3.2
U97011-5|AAO12451.1| 168|Caenorhabditis elegans Hypothetical pr... 29 5.6
U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical pr... 29 5.6
U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.6
U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical pr... 29 5.6
U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical pr... 29 5.6
U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical... 28 7.4
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr... 28 9.7
>AL023828-10|CAA19447.1| 247|Caenorhabditis elegans Hypothetical
protein Y17G7B.7 protein.
Length = 247
Score = 297 bits (729), Expect = 6e-81
Identities = 145/227 (63%), Positives = 177/227 (77%)
Frame = -1
Query: 827 INEIVNNLKKGPLDPNVDVIVGVPAIYLSYVKTIIPDNVEVAAQNCWKSPKGAFTGEISP 648
++ IV L + +VDV+V PA YL+Y K+ + V VAAQNC+K PKGAFTGEISP
Sbjct: 20 VDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCYKVPKGAFTGEISP 79
Query: 647 AMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKVIACIGETLEERESGKTE 468
AMIKD+G+ WVILGHSERR +FGE D L+AEK HALE+G+KV+ CIGE LEERE+G T+
Sbjct: 80 AMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTK 139
Query: 467 EVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGS 288
+V FRQL+A+V G WENIV+AYEPVWAIGTGKTA+ +QAQ+VH +R +L VS +
Sbjct: 140 DVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPA 198
Query: 287 VSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLKPEFVEIVNA 147
V+DA RI YGGSVTA NA EL DIDGFLVGGASLKP+FV+I+NA
Sbjct: 199 VADATRIIYGGSVTADNAAELGKKPDIDGFLVGGASLKPDFVKIINA 245
>U23081-1|AAA79846.1| 247|Caenorhabditis elegans triosephosphate
isomerase protein.
Length = 247
Score = 295 bits (723), Expect = 3e-80
Identities = 143/227 (62%), Positives = 177/227 (77%)
Frame = -1
Query: 827 INEIVNNLKKGPLDPNVDVIVGVPAIYLSYVKTIIPDNVEVAAQNCWKSPKGAFTGEISP 648
++ IV L + +VDV+V PA YL+Y K+ + V VAAQNC+K PKGAFTGEISP
Sbjct: 20 VDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQNCYKVPKGAFTGEISP 79
Query: 647 AMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKVIACIGETLEERESGKTE 468
AMIKD+G+ WVILGHSERR +FGE D L+AEK HALE+G+KV+ CIGE LEERE+G T+
Sbjct: 80 AMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGEKLEEREAGHTK 139
Query: 467 EVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGS 288
+V FRQL+A+V G WENIV+AYEPVWAIGTGKTA+ +QAQ+VH +R +L VS +
Sbjct: 140 DVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQAQEVHEWIRAFLKEKVSPA 198
Query: 287 VSDAVRIQYGGSVTAANAKELASCKDIDGFLVGGASLKPEFVEIVNA 147
V+DA RI YGGSVTA NA ++ DIDGFLVGGASLKP+FV+I+NA
Sbjct: 199 VADATRIIYGGSVTADNAADVGKKPDIDGFLVGGASLKPDFVKIINA 245
>U61944-2|AAL56621.1| 705|Caenorhabditis elegans Dynamin related
protein protein1, isoform a protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -1
Query: 833 NQINEIVNNLKKGPLDPNVDVIVGVPAIYLSYVKTIIPDNVE 708
++INE+V+ + K L P +++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>U61944-1|AAL56622.1| 712|Caenorhabditis elegans Dynamin related
protein protein1, isoform b protein.
Length = 712
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -1
Query: 833 NQINEIVNNLKKGPLDPNVDVIVGVPAIYLSYVKTIIPDNVE 708
++INE+V+ + K L P +++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>AF166274-1|AAD49861.1| 705|Caenorhabditis elegans dynamin-related
protein protein.
Length = 705
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = -1
Query: 833 NQINEIVNNLKKGPLDPNVDVIVGVPAIYLSYVKTIIPDNVE 708
++INE+V+ + K L P +++ + AI L+Y+ T P+ E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505
>Z46242-3|CAA86338.2| 680|Caenorhabditis elegans Hypothetical
protein F35G12.4b protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -1
Query: 413 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 240
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 239 NAKELASCK 213
+ CK
Sbjct: 500 LFERWPPCK 508
>Z46242-2|CAA86335.2| 683|Caenorhabditis elegans Hypothetical
protein F35G12.4a protein.
Length = 683
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = -1
Query: 413 ENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSD--AVRIQYGGSVTAA 240
EN Y P W + K+ Q D AL +WLS+ +G + ++ YGG + +
Sbjct: 440 ENSRQVYIPSWFVVDSKSGMLQITLDELDALSSWLSSKDAGFDDNDRETKLNYGGMMLRS 499
Query: 239 NAKELASCK 213
+ CK
Sbjct: 500 LFERWPPCK 508
>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
protein R10F2.1 protein.
Length = 2779
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -1
Query: 386 VWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRIQYGGS 252
V+++ TG+ T AQ HH + ++++VS S SDA+R+ G S
Sbjct: 2612 VYSVKTGEIRTLSDAQHHHHHPTHSMTSSVSTS-SDALRMVRGSS 2655
>U58760-4|AAK31462.2| 678|Caenorhabditis elegans Hypothetical
protein C27A2.4 protein.
Length = 678
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 609 KYNPIYSNVFDHSG*NFTSKSSFWRLPTVLGC 704
K N ++S + +H+G + +FWR+P L C
Sbjct: 171 KVNSLFSKLSEHTG-EVINADNFWRIPDTLRC 201
>U97011-5|AAO12451.1| 168|Caenorhabditis elegans Hypothetical
protein F31F7.1b protein.
Length = 168
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 468 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 632
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 633 VFDHSG*NFTSKSSFWRL 686
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U97011-4|AAQ65202.1| 273|Caenorhabditis elegans Hypothetical
protein F31F7.1c protein.
Length = 273
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 468 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 632
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 633 VFDHSG*NFTSKSSFWRL 686
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U97011-3|AAQ65201.1| 316|Caenorhabditis elegans Hypothetical
protein F31F7.1a protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.6
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Frame = +3
Query: 468 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 632
L+L R S + L + GN + + R +G+SN LF K NC+ F K +P+Y+
Sbjct: 73 LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132
Query: 633 VFDHSG*NFTSKSSFWRL 686
F NF + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145
>U13645-6|AAV34802.1| 457|Caenorhabditis elegans Hypothetical
protein C05D10.1c protein.
Length = 457
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 383
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 191 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 230
>U13645-5|AAM15541.1| 425|Caenorhabditis elegans Hypothetical
protein C05D10.1b protein.
Length = 425
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 383
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 159 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 198
>U13645-4|AAA20986.2| 529|Caenorhabditis elegans Hypothetical
protein C05D10.1a protein.
Length = 529
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3
Query: 264 LNTYSVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 383
+++ +V TPT G T+SMVD+L L ++ T SP
Sbjct: 263 MHSSTVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 302
>AF047659-15|AAC04426.1| 493|Caenorhabditis elegans Hypothetical
protein K07H8.1 protein.
Length = 493
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -2
Query: 496 SKRENLARLRKLFLDN*KL*YRPLVTNGK-ILCLPMNLYGLLV 371
+K+ N+ +L + LDN + + P + + ILC +NLYG L+
Sbjct: 112 AKQSNIEKLINIVLDNRSVGFPPSSDSPQFILCRELNLYGNLL 154
>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
protein F54F12.1 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = -1
Query: 485 ESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLS 306
+S ++ + + LKAL IG + L+Y+ + + +GK + Q V+H NW+
Sbjct: 181 QSIQSSQSLLPVLKALRKVIGSHVNGLELSYKYIAGLPSGKLDLEELIQAVYH---NWIK 237
Query: 305 ANV 297
+
Sbjct: 238 NRI 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,743,633
Number of Sequences: 27780
Number of extensions: 417035
Number of successful extensions: 1206
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1204
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -