Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19p02r
         (333 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    22   1.7  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   2.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   6.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    20   6.8  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    20   6.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   6.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   9.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    20   9.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    20   9.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    20   9.1  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 191 LSNTTAIAEAWARLDHKFD 135
           L+NT  +   W  LD+ FD
Sbjct: 32  LTNTLNVIHKWKYLDYDFD 50


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 77  PPPYPHRRTSARKHAWRT 130
           P P+P R T A+ H + T
Sbjct: 417 PKPFPRRATLAQLHNFTT 434


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 267  GRYQLPATHRGARRRLGQGS 208
            G+Y  P  H G+R  +G+ S
Sbjct: 1825 GQYGAPYDHYGSRGSVGRRS 1844


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
          protein.
          Length = 1770

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 45 SQVLTGFGELSLLHT 89
          S+ LT  G+LS +HT
Sbjct: 34 SRTLTSLGDLSDVHT 48


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -1

Query: 45  CPREGLRRSRLW 10
           CP E L+  R+W
Sbjct: 103 CPLEKLKERRIW 114


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 265 SVSTTSHPPWCP 230
           S+S T  PP CP
Sbjct: 558 SLSKTPQPPQCP 569


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 13/53 (24%), Positives = 20/53 (37%)
 Frame = +3

Query: 9   SIADFFVILLEGSQVLTGFGELSLLHTLTDVPVHESTLGVHEVELVVKASPSF 167
           SI    V  +   ++   F       T  +V + E T+G      VV   P+F
Sbjct: 180 SILAIKVYYISCPEISVNFAHFPATPTGREVALIEQTIGTCVANAVVIEQPTF 232


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +1

Query: 97  TYQCTKARLAYMRSNLW 147
           TYQC   + A+ + NL+
Sbjct: 61  TYQCLLCQKAFDQKNLY 77


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 32   PSRGQPGPHGLRRTLPP 82
            P RG+     LR  LPP
Sbjct: 1839 PRRGRSSRSSLRTLLPP 1855


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 32   PSRGQPGPHGLRRTLPP 82
            P RG+     LR  LPP
Sbjct: 1835 PRRGRSSRSSLRTLLPP 1851


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,469
Number of Sequences: 438
Number of extensions: 1625
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)