BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19p01r
(453 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT021227-1|AAX33375.1| 124|Drosophila melanogaster RH43429p pro... 31 0.96
BT011366-1|AAR96158.1| 290|Drosophila melanogaster RE65433p pro... 30 1.3
AY122094-1|AAM52606.1| 289|Drosophila melanogaster GH05321p pro... 30 1.3
AE014296-1055|AAF50708.1| 290|Drosophila melanogaster CG10472-P... 30 1.3
AY119656-1|AAM50310.1| 460|Drosophila melanogaster SD02418p pro... 30 1.7
AE014296-1211|AAF50597.1| 460|Drosophila melanogaster CG8616-PA... 30 1.7
AE014298-484|AAF45840.1| 238|Drosophila melanogaster CG14421-PA... 29 2.2
AF195191-1|AAF27820.1| 122|Drosophila melanogaster yippee inter... 28 5.1
AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-P... 28 5.1
AY075321-1|AAL68188.2| 273|Drosophila melanogaster GH08377p pro... 28 6.8
AF512510-1|AAM46864.1| 270|Drosophila melanogaster Machete prot... 28 6.8
AE014296-1047|AAF50716.1| 270|Drosophila melanogaster CG6457-PA... 28 6.8
BT024968-1|ABE01198.1| 364|Drosophila melanogaster IP15234p pro... 27 8.9
AE014297-3287|AAF56111.2| 1383|Drosophila melanogaster CG17894-P... 27 8.9
>BT021227-1|AAX33375.1| 124|Drosophila melanogaster RH43429p
protein.
Length = 124
Score = 30.7 bits (66), Expect = 0.96
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +1
Query: 208 YRRWSRSIRCIPRQARRFQRCSR---QHRPGAQL-LEHHR*QEQFQHRTWKSGLPRW 366
+RRWSR R R +R RC+R + RP +L L H Q Q + R W+ W
Sbjct: 46 WRRWSRWSRRFERSCQRECRCNRRQQRRRPSFRLGLGHCNRQRQLRRR-WRWTWQTW 101
>BT011366-1|AAR96158.1| 290|Drosophila melanogaster RE65433p
protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = -3
Query: 409 SNVSVVPADGLLEATSEEGQTSKYDVGTALVSDDVQVAVLLAGADENSAGTFVPVAEYIE 230
SN+ + G+ + G D G+ + + L G + G F + Y++
Sbjct: 219 SNICIKTTGGISTCNGDSGGPLVLDDGSNTLIGATSFGIAL-GCEVGWPGVFTRITYYLD 277
Query: 229 WIETTAGI 206
WIE +G+
Sbjct: 278 WIEEKSGV 285
>AY122094-1|AAM52606.1| 289|Drosophila melanogaster GH05321p
protein.
Length = 289
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = -3
Query: 409 SNVSVVPADGLLEATSEEGQTSKYDVGTALVSDDVQVAVLLAGADENSAGTFVPVAEYIE 230
SN+ + G+ + G D G+ + + L G + G F + Y++
Sbjct: 218 SNICIKTTGGISTCNGDSGGPLVLDDGSNTLIGATSFGIAL-GCEVGWPGVFTRITYYLD 276
Query: 229 WIETTAGI 206
WIE +G+
Sbjct: 277 WIEEKSGV 284
>AE014296-1055|AAF50708.1| 290|Drosophila melanogaster CG10472-PA
protein.
Length = 290
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/68 (22%), Positives = 28/68 (41%)
Frame = -3
Query: 409 SNVSVVPADGLLEATSEEGQTSKYDVGTALVSDDVQVAVLLAGADENSAGTFVPVAEYIE 230
SN+ + G+ + G D G+ + + L G + G F + Y++
Sbjct: 219 SNICIKTTGGISTCNGDSGGPLVLDDGSNTLIGATSFGIAL-GCEVGWPGVFTRITYYLD 277
Query: 229 WIETTAGI 206
WIE +G+
Sbjct: 278 WIEEKSGV 285
>AY119656-1|AAM50310.1| 460|Drosophila melanogaster SD02418p
protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 411 FRTCPWCPPTVSLRPPARKARLPSTMLELLLS 316
F PW PP S RPPA++ S+ L ++ S
Sbjct: 232 FGNLPWLPPQSSGRPPAQRLTYNSSTLPMIES 263
>AE014296-1211|AAF50597.1| 460|Drosophila melanogaster CG8616-PA
protein.
Length = 460
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -1
Query: 411 FRTCPWCPPTVSLRPPARKARLPSTMLELLLS 316
F PW PP S RPPA++ S+ L ++ S
Sbjct: 232 FGNLPWLPPQSSGRPPAQRLTYNSSTLPMIES 263
>AE014298-484|AAF45840.1| 238|Drosophila melanogaster CG14421-PA
protein.
Length = 238
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/85 (29%), Positives = 39/85 (45%)
Frame = +1
Query: 181 TQVLQEPG*YRRWSRSIRCIPRQARRFQRCSRQHRPGAQLLEHHR*QEQFQHRTWKSGLP 360
TQV + RR + R R ++++R +Q R Q + R Q+Q + + +
Sbjct: 143 TQVARSQANRRRQVNARRQRQRLQQKYRRRQQQQRRRRQQQQQKRRQQQKRRQQQR---- 198
Query: 361 RWWPQGDRRRAPRTRSKAAQLLSRF 435
R Q RRR R R +L+SRF
Sbjct: 199 RRRQQNQRRRQRRNRRTNMRLVSRF 223
>AF195191-1|AAF27820.1| 122|Drosophila melanogaster yippee
interacting protein 7 protein.
Length = 122
Score = 28.3 bits (60), Expect = 5.1
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -3
Query: 397 VVPADGLLEATSEEGQTSKYDVGTALVSDDVQV-AVLLAGADENSAGT---FVPVAEYIE 230
+V + L T+ + T + D G L D V + A AD +G F + Y +
Sbjct: 55 IVTSRVLCXDTTNKASTCQGDSGGPLALDGVLIGATSFGSADGCESGAPAAFTRITYYRD 114
Query: 229 WIETTAGI 206
WI+ T+GI
Sbjct: 115 WIKETSGI 122
>AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-PA
protein.
Length = 733
Score = 28.3 bits (60), Expect = 5.1
Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 208 YRRWSRSIRCIPR-QARRFQRCSRQHRPGAQLL 303
Y +WSR +C P+ RR+++C + G ++L
Sbjct: 346 YSKWSRWTKCSPKCTTRRYKKCRIMDQCGREVL 378
>AY075321-1|AAL68188.2| 273|Drosophila melanogaster GH08377p
protein.
Length = 273
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -3
Query: 397 VVPADGLLEATSEEGQTSKYDVGTALVSDDVQV-AVLLAGADENSAGT---FVPVAEYIE 230
+V + L T+ + T + D G L D V + A AD +G F + Y +
Sbjct: 206 IVTSRVLCVDTTNKASTCQGDSGGPLALDGVLIGATSFGSADGCESGAPAAFTRITYYRD 265
Query: 229 WIETTAGI 206
WI+ T+GI
Sbjct: 266 WIKETSGI 273
>AF512510-1|AAM46864.1| 270|Drosophila melanogaster Machete
protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -3
Query: 397 VVPADGLLEATSEEGQTSKYDVGTALVSDDVQV-AVLLAGADENSAGT---FVPVAEYIE 230
+V + L T+ + T + D G L D V + A AD +G F + Y +
Sbjct: 203 IVTSRVLCVDTTNKASTCQGDSGGPLALDGVLIGATSFGSADGCESGAPAAFTRITYYRD 262
Query: 229 WIETTAGI 206
WI+ T+GI
Sbjct: 263 WIKETSGI 270
>AE014296-1047|AAF50716.1| 270|Drosophila melanogaster CG6457-PA
protein.
Length = 270
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = -3
Query: 397 VVPADGLLEATSEEGQTSKYDVGTALVSDDVQV-AVLLAGADENSAGT---FVPVAEYIE 230
+V + L T+ + T + D G L D V + A AD +G F + Y +
Sbjct: 203 IVTSRVLCVDTTNKASTCQGDSGGPLALDGVLIGATSFGSADGCESGAPAAFTRITYYRD 262
Query: 229 WIETTAGI 206
WI+ T+GI
Sbjct: 263 WIKETSGI 270
>BT024968-1|ABE01198.1| 364|Drosophila melanogaster IP15234p
protein.
Length = 364
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 263 WNLRACRGIHRMDRDHRRY 207
W L R +HR+D DH Y
Sbjct: 46 WELEMLRTVHRLDMDHNPY 64
>AE014297-3287|AAF56111.2| 1383|Drosophila melanogaster CG17894-PC,
isoform C protein.
Length = 1383
Score = 27.5 bits (58), Expect = 8.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 263 WNLRACRGIHRMDRDHRRY 207
W L R +HR+D DH Y
Sbjct: 46 WELEMLRTVHRLDMDHNPY 64
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,008,818
Number of Sequences: 53049
Number of extensions: 276738
Number of successful extensions: 1370
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1476622287
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -