Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19p01r
(453 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110484-7|CAB54398.1| 286|Caenorhabditis elegans Hypothetical ... 28 3.7
U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical pr... 27 4.8
U29536-4|AAA68792.1| 197|Caenorhabditis elegans Hypothetical pr... 27 6.4
U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical p... 27 8.4
U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical pr... 27 8.4
U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical pr... 27 8.4
U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical pr... 27 8.4
U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical pr... 27 8.4
U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical pr... 27 8.4
U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical pr... 27 8.4
U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical pr... 27 8.4
>AL110484-7|CAB54398.1| 286|Caenorhabditis elegans Hypothetical
protein Y38E10A.7 protein.
Length = 286
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = -3
Query: 319 VSDDVQVAVLLAGADENSAGTFVPVAEYIE---WIETTAGIT 203
+S + V+L NSAGTF P A Y W E T T
Sbjct: 59 LSPTTRTPVILVHGTTNSAGTFAPQAAYFRANGWSEETVYAT 100
>U58764-3|AAB00725.1| 122|Caenorhabditis elegans Hypothetical
protein M03E7.2 protein.
Length = 122
Score = 27.5 bits (58), Expect = 4.8
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 260 SSAVLVSTGQEHSYLNIIADKSSSNIVLGSLAFLAGGLKETVGG 391
SS + +S+ SY + + D S++ LGS+ GG+ GG
Sbjct: 12 SSLIAISSALPASYSSSLNDPLLSSLGLGSMGMGMGGMNGMYGG 55
>U29536-4|AAA68792.1| 197|Caenorhabditis elegans Hypothetical
protein F45E12.5a protein.
Length = 197
Score = 27.1 bits (57), Expect = 6.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 361 RWWPQGDRRRAPRTRSKAA 417
RWWPQ DRR ++ K++
Sbjct: 32 RWWPQPDRRFTTKSDEKSS 50
>U80815-10|AAO91678.1| 437|Caenorhabditis elegans Hypothetical
protein W02C12.3g protein.
Length = 437
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 203 GNTGGGLDPFDVFRDRHE 256
GN+GG DP D +RDR +
Sbjct: 221 GNSGGDNDPEDYYRDRRK 238
>U80815-9|AAV34785.1| 361|Caenorhabditis elegans Hypothetical
protein W02C12.3h protein.
Length = 361
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 203 GNTGGGLDPFDVFRDRHE 256
GN+GG DP D +RDR +
Sbjct: 84 GNSGGDNDPEDYYRDRRK 101
>U80815-8|AAB37997.1| 498|Caenorhabditis elegans Hypothetical
protein W02C12.3a protein.
Length = 498
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 203 GNTGGGLDPFDVFRDRHE 256
GN+GG DP D +RDR +
Sbjct: 221 GNSGGDNDPEDYYRDRRK 238
>U80815-7|AAO91677.1| 473|Caenorhabditis elegans Hypothetical
protein W02C12.3f protein.
Length = 473
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 203 GNTGGGLDPFDVFRDRHE 256
GN+GG DP D +RDR +
Sbjct: 196 GNSGGDNDPEDYYRDRRK 213
>U80815-6|AAO91675.1| 464|Caenorhabditis elegans Hypothetical
protein W02C12.3d protein.
Length = 464
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 203 GNTGGGLDPFDVFRDRHE 256
GN+GG DP D +RDR +
Sbjct: 187 GNSGGDNDPEDYYRDRRK 204
>U80815-5|AAO91676.1| 439|Caenorhabditis elegans Hypothetical
protein W02C12.3e protein.
Length = 439
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 203 GNTGGGLDPFDVFRDRHE 256
GN+GG DP D +RDR +
Sbjct: 162 GNSGGDNDPEDYYRDRRK 179
>U80815-4|AAO91674.1| 524|Caenorhabditis elegans Hypothetical
protein W02C12.3c protein.
Length = 524
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 203 GNTGGGLDPFDVFRDRHE 256
GN+GG DP D +RDR +
Sbjct: 247 GNSGGDNDPEDYYRDRRK 264
>U80815-3|AAK73899.1| 499|Caenorhabditis elegans Hypothetical
protein W02C12.3b protein.
Length = 499
Score = 26.6 bits (56), Expect = 8.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2
Query: 203 GNTGGGLDPFDVFRDRHE 256
GN+GG DP D +RDR +
Sbjct: 222 GNSGGDNDPEDYYRDRRK 239
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,210,525
Number of Sequences: 27780
Number of extensions: 124063
Number of successful extensions: 422
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 799252350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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