Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19o24f
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    25   0.58 
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    25   0.58 
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    25   0.58 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.4  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 328 ELWSEGDCFCLTVWDQNSIPVALVRYW 248
           +LW   D  C T    N   +AL RYW
Sbjct: 110 KLWLTCDVLCCTASILNLCAIALDRYW 136



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 172 IITMYWLPFFMVAVV 216
           +  + WLPFF++ V+
Sbjct: 335 VFVVCWLPFFLMYVI 349


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 328 ELWSEGDCFCLTVWDQNSIPVALVRYW 248
           +LW   D  C T    N   +AL RYW
Sbjct: 110 KLWLTCDVLCCTASILNLCAIALDRYW 136



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 172 IITMYWLPFFMVAVV 216
           +  + WLPFF++ V+
Sbjct: 335 VFVVCWLPFFLMYVI 349


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -2

Query: 328 ELWSEGDCFCLTVWDQNSIPVALVRYW 248
           +LW   D  C T    N   +AL RYW
Sbjct: 110 KLWLTCDVLCCTASILNLCAIALDRYW 136



 Score = 21.8 bits (44), Expect = 7.1
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +1

Query: 172 IITMYWLPFFMVAVV 216
           +  + WLPFF++ V+
Sbjct: 335 VFVVCWLPFFLMYVI 349


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +1

Query: 187 WLPFFMVAVV 216
           WLPFF++A+V
Sbjct: 385 WLPFFVLALV 394


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,896
Number of Sequences: 438
Number of extensions: 5145
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)