Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19o19f
         (482 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069186-1|AAL39331.1|  101|Drosophila melanogaster GH23780p pro...   110   8e-25
AE014134-52|AAF51538.1|  101|Drosophila melanogaster CG11455-PB,...   110   8e-25
AE014134-51|AAN10510.1|  101|Drosophila melanogaster CG11455-PA,...   110   8e-25
AY058540-1|AAL13769.1|  861|Drosophila melanogaster LD24267p pro...    30   1.9  
AL121806-14|CAB58099.1|  861|Drosophila melanogaster EG:33C11.2 ...    30   1.9  
AE014298-169|AAF45598.1|  861|Drosophila melanogaster CG11403-PA...    30   1.9  
AE013599-2970|AAF57503.1|  158|Drosophila melanogaster CG13869-P...    28   5.8  

>AY069186-1|AAL39331.1|  101|Drosophila melanogaster GH23780p
           protein.
          Length = 101

 Score =  110 bits (265), Expect = 8e-25
 Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = +3

Query: 93  MSLSPFFRSPFTDVTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHEC 272
           MSL+PF R P TD+TG +I+HQ   +C K E + M+C EAYGLERGK +CA L  D+ EC
Sbjct: 1   MSLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKRECADLISDFQEC 60

Query: 273 STLTKQLKRFLAIRHERQRQISQGKLTGDEKYVS-PRVDSY 392
             + KQL RF A+R+ER +Q  +G+  G E +   PRVD+Y
Sbjct: 61  VGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDAY 101


>AE014134-52|AAF51538.1|  101|Drosophila melanogaster CG11455-PB,
           isoform B protein.
          Length = 101

 Score =  110 bits (265), Expect = 8e-25
 Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = +3

Query: 93  MSLSPFFRSPFTDVTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHEC 272
           MSL+PF R P TD+TG +I+HQ   +C K E + M+C EAYGLERGK +CA L  D+ EC
Sbjct: 1   MSLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKRECADLISDFQEC 60

Query: 273 STLTKQLKRFLAIRHERQRQISQGKLTGDEKYVS-PRVDSY 392
             + KQL RF A+R+ER +Q  +G+  G E +   PRVD+Y
Sbjct: 61  VGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDAY 101


>AE014134-51|AAN10510.1|  101|Drosophila melanogaster CG11455-PA,
           isoform A protein.
          Length = 101

 Score =  110 bits (265), Expect = 8e-25
 Identities = 52/101 (51%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
 Frame = +3

Query: 93  MSLSPFFRSPFTDVTGGMISHQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHEC 272
           MSL+PF R P TD+TG +I+HQ   +C K E + M+C EAYGLERGK +CA L  D+ EC
Sbjct: 1   MSLTPFLRLPLTDLTGCLINHQTYDKCGKFEMKMMECFEAYGLERGKRECADLISDFQEC 60

Query: 273 STLTKQLKRFLAIRHERQRQISQGKLTGDEKYVS-PRVDSY 392
             + KQL RF A+R+ER +Q  +G+  G E +   PRVD+Y
Sbjct: 61  VGMQKQLMRFHAMRNERYKQWLKGERKGQEFFADPPRVDAY 101


>AY058540-1|AAL13769.1|  861|Drosophila melanogaster LD24267p
           protein.
          Length = 861

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
 Frame = +3

Query: 156 QLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAIR-----HE 320
           Q L + ++E  +  + LE+ G  + + + A L    H  + L KQ ++   IR     H+
Sbjct: 87  QELAKLKEESEQSSNWLESQG--KSRAQRAELLRLQHLQALLDKQEQQLDQIRKGAKKHK 144

Query: 321 RQRQISQGKLTGDEKYVSPRVDS 389
           RQ ++  GKL   EK + P  DS
Sbjct: 145 RQGRVHPGKLEELEKDLDPESDS 167


>AL121806-14|CAB58099.1|  861|Drosophila melanogaster EG:33C11.2
           protein.
          Length = 861

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
 Frame = +3

Query: 156 QLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAIR-----HE 320
           Q L + ++E  +  + LE+ G  + + + A L    H  + L KQ ++   IR     H+
Sbjct: 87  QELAKLKEESEQSSNWLESQG--KSRAQRAELLRLQHLQALLDKQEQQLDQIRKGAKKHK 144

Query: 321 RQRQISQGKLTGDEKYVSPRVDS 389
           RQ ++  GKL   EK + P  DS
Sbjct: 145 RQGRVHPGKLEELEKDLDPESDS 167


>AE014298-169|AAF45598.1|  861|Drosophila melanogaster CG11403-PA
           protein.
          Length = 861

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
 Frame = +3

Query: 156 QLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHECSTLTKQLKRFLAIR-----HE 320
           Q L + ++E  +  + LE+ G  + + + A L    H  + L KQ ++   IR     H+
Sbjct: 87  QELAKLKEESEQSSNWLESQG--KSRAQRAELLRLQHLQALLDKQEQQLDQIRKGAKKHK 144

Query: 321 RQRQISQGKLTGDEKYVSPRVDS 389
           RQ ++  GKL   EK + P  DS
Sbjct: 145 RQGRVHPGKLEELEKDLDPESDS 167


>AE013599-2970|AAF57503.1|  158|Drosophila melanogaster CG13869-PA
           protein.
          Length = 158

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +3

Query: 153 HQLLGRCQKEEARYMDCLEAYGLERGKVKCAHLFGDYHEC 272
           H+LL   Q  + RY+D   AY + R  V C + F + H C
Sbjct: 104 HRLLRPHQTLDVRYLD---AYRMGRHGVDCRNAFPEAHHC 140


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,314,185
Number of Sequences: 53049
Number of extensions: 442561
Number of successful extensions: 1004
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 936
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)