Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19o06r
(832 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0213 + 26414613-26414695,26416907-26417077,26417983-264182... 70 2e-12
01_05_0521 - 22904656-22904962,22905132-22905340,22905432-229055... 64 1e-10
01_06_0491 - 29763738-29764044,29764266-29764474,29764565-297646... 64 2e-10
03_02_0058 - 5316112-5316418,5316497-5316705,5316773-5316859,531... 60 2e-09
03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,205... 57 2e-08
01_01_1200 - 9670109-9670165,9670569-9670664,9670886-9670969,967... 42 8e-04
03_01_0005 + 46370-46454,46962-47071,47381-47545,47672-48463,487... 31 1.5
12_01_0418 - 3304741-3304904,3305579-3305762,3307254-3307347,330... 30 2.6
12_01_0767 - 6956758-6957138,6957491-6957581,6957796-6957861,695... 29 4.5
06_03_0749 + 24133302-24134274,24134585-24135272,24135751-241358... 29 4.5
01_01_1166 + 9287840-9288040,9289752-9289799,9292166-9292282,929... 29 4.5
08_02_1207 - 25302186-25302275,25303089-25303141,25303400-253037... 29 6.0
11_06_0513 + 24466131-24469487 28 7.9
08_02_1596 + 28125331-28125556,28125986-28126047,28126160-281261... 28 7.9
08_01_0800 - 7738035-7738381,7739951-7740521 28 7.9
06_03_0399 - 20403488-20405092 28 7.9
>05_06_0213 +
26414613-26414695,26416907-26417077,26417983-26418219,
26418543-26418572,26419248-26419282,26421680-26421747,
26423067-26423126,26423310-26423399,26423487-26423695,
26424083-26424383
Length = 427
Score = 70.1 bits (164), Expect = 2e-12
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 1/175 (0%)
Frame = -1
Query: 799 KTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNF 620
K+ K + + + +N + L+ A P+V + V + G FDT F+K N
Sbjct: 255 KSAKAEVQYLHPHAGLNAIVGLN-ANPLVSFSGVFGTGAFAVGTDVAFDTATGDFTKYNA 313
Query: 619 ALGYQSGDFALHTNVDN-GKDFGGSIYQKVSDKLDCGVSMKWTAGSADTLFGVGAKYALD 443
L + + D ++N G S Y KVS G + + S + G ++ALD
Sbjct: 314 GLSHTTPDLTAALLLNNKGDSLAASYYHKVSKTSAVGAELAHSFSSNENTLTFGTQHALD 373
Query: 442 QDASLHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELEP 278
+ ++ A+ NN + Q + RP +T+S +D + + KVG++L L+P
Sbjct: 374 ELTTVKARFNNFGMASALIQHEFRPKSLVTISTEVDTKAIDKSS-KVGLSLVLKP 427
>01_05_0521 -
22904656-22904962,22905132-22905340,22905432-22905521,
22905624-22905734,22906401-22906468,22906611-22906653
Length = 275
Score = 64.5 bits (150), Expect = 1e-10
Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 4/179 (2%)
Frame = -1
Query: 805 ETKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKN 626
+ ++GKL+ + ++ +N ++ L+ + P+V+++ V + GV FDT + F+K
Sbjct: 99 DQRSGKLELQYLHEYAGINASVGLN-SNPMVNLSGVFGSKELSVGVDVAFDTATSNFTKY 157
Query: 625 NFALGYQSGDF--ALHTNVDNGKDFGGSIYQKVS--DKLDCGVSMKWTAGSADTLFGVGA 458
N AL + D +LH N ++G S Y V G + + ++ G+
Sbjct: 158 NAALSLTNSDLIASLHLN-NHGDTLIASYYHLVKHHSNTAVGAELSHSFSRNESTLIFGS 216
Query: 457 KYALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELE 281
+++LD ++ A+ NN + Q + RP +T+S +D + KVG++L L+
Sbjct: 217 QHSLDPHTTVKARFNNYGMASALVQHEWRPKSLITISGEVDTKAIEK-STKVGLSLVLK 274
>01_06_0491 -
29763738-29764044,29764266-29764474,29764565-29764654,
29764819-29764905,29765598-29765733,29766036-29766186,
29766334-29766502
Length = 382
Score = 63.7 bits (148), Expect = 2e-10
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Frame = -1
Query: 820 LPHRLETKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKA 641
LP +T GK + + +D ++ + L + P+V+++ V + G DT
Sbjct: 202 LPFPYQT-AGKAELQYLHDYAGISLGVGLT-SKPLVNLSGVFGNKSVAVGADVAVDTSTG 259
Query: 640 KFSKNNFALGYQSGDFALHTNVDN-GKDFGGSIYQKVSDKLD--CGVSMKWTAGSADTLF 470
F+K + L + D A ++N G S Y V+ + G + + + +
Sbjct: 260 DFTKYDAGLTINNSDLAADLTLNNKGDSLTASYYHLVNKESGTAAGAELTHSFSTKENTL 319
Query: 469 GVGAKYALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVAL 290
G ++ALD ++ A+ NN ++ Q + RP LTLSA +D + + KVG++L
Sbjct: 320 SFGMQHALDPLTTVKARYNNHGMVSALIQHEWRPKSFLTLSAEVDTKAIDKAS-KVGLSL 378
Query: 289 ELEP 278
L+P
Sbjct: 379 VLKP 382
>03_02_0058 -
5316112-5316418,5316497-5316705,5316773-5316859,
5316945-5317055,5317536-5317643,5319082-5319149,
5319269-5319320
Length = 313
Score = 60.5 bits (140), Expect = 2e-09
Identities = 45/176 (25%), Positives = 78/176 (44%), Gaps = 3/176 (1%)
Frame = -1
Query: 796 TGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKNNFA 617
+GK++ + ++ + T + + PVV+ + QG G FDT KF+K + A
Sbjct: 140 SGKVEMQYFHENASFATAVGMK-PSPVVEFSGTAGAQGLAFGAEAGFDTATGKFTKYSAA 198
Query: 616 LGYQSGDF-ALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWT--AGSADTLFGVGAKYAL 446
+G D+ A D G S + DK V + T + + VG Y +
Sbjct: 199 IGVTKPDYHAAIVLADKGDTVKVSGVYHLDDKQKSSVVAELTRRLSTNENTLTVGGLYKV 258
Query: 445 DQDASLHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGGHKVGVALELEP 278
D + ++ A++NN + Q +++P LT+S D + + K G+AL L P
Sbjct: 259 DPETAVKARLNNTGKLAALLQHEVKPKSVLTISGEFDTKALDR-PPKFGLALALRP 313
>03_01_0265 + 2046918-2049102,2052385-2052452,2052542-2052652,
2053164-2053250,2053476-2053684,2054115-2054340,
2054473-2054510,2054657-2054714,2055363-2055662,
2055832-2055903,2055988-2056112,2056240-2056312,
2056417-2056521
Length = 1218
Score = 56.8 bits (131), Expect = 2e-08
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = -1
Query: 805 ETKTGKLKTSFTNDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKAKFSKN 626
+ K+GKL + +D A+N+ + L + P++++AA + AG FD+ A +K
Sbjct: 812 DQKSGKLDLQYLHDHFALNSTIGLT-STPLIELAATIGTNELSAGAEVGFDSTSASVTKY 870
Query: 625 NFALGYQSGDF-ALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWT--AGSADTLFGVGAK 455
N + Y DF A D G+ S ++ V+ + T + + F +G+
Sbjct: 871 NSGICYNKHDFSAAVLLADKGETLKASYIHTFNETNGATVAAEVTHKLKTKENYFTIGSS 930
Query: 454 YALDQDASLHAKINNKSLIGLGYQQKLRPGVT 359
+A+D L + +N +G+ Q + RP T
Sbjct: 931 HAIDSSTLLKTRFSNGGKVGVLCQHEWRPKST 962
>01_01_1200 -
9670109-9670165,9670569-9670664,9670886-9670969,
9671050-9671118,9671892-9671993,9672807-9672872,
9673791-9673841,9673953-9674048,9674141-9674279,
9674343-9674424,9674528-9674723
Length = 345
Score = 41.5 bits (93), Expect = 8e-04
Identities = 25/99 (25%), Positives = 42/99 (42%)
Frame = -1
Query: 652 TQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVSDKLDCGVSMKWTAGSADTL 473
T + +S+ F+ Y+ DF + N +GG+ Q V+ L G W +
Sbjct: 173 TNEPHYSQGMFSFDYKGKDFRSQFQLGNNAFYGGNYIQSVTKNLSLGTEAFWLGQQRKSG 232
Query: 472 FGVGAKYALDQDASLHAKINNKSLIGLGYQQKLRPGVTL 356
G A+Y + + +I L+ L Y QK+ V+L
Sbjct: 233 VGFVARYDTKKMVAT-GQIATTGLVSLSYVQKVSEKVSL 270
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = -1
Query: 550 SIYQKVSDKLDCGVSMKWTAGSADTLFGVGAKYALDQDASLHAKINNKSLIGLGYQQKLR 371
S QKVS+K+ + + D G Y L Q L KI+ ++ +++L
Sbjct: 259 SYVQKVSEKVSLASDFMYNHMAKDVTASFGYDYMLRQ-CRLRGKIDTNGVVSALLEERLT 317
Query: 370 PGVTLTLSAAID 335
PGV LSA +D
Sbjct: 318 PGVNFVLSAELD 329
>03_01_0005 +
46370-46454,46962-47071,47381-47545,47672-48463,
48730-48840,48935-49195,49415-49638,49735-49855,
50673-51214,51302-51488,51569-51895,52047-52197,
52287-52424,52918-53013,53276-53357,54411-54679,
54769-54882,55050-55288,55488-55715,55799-55951,
56479-56616,57061-57188,57598-57718,58142-58306,
59486-59633,59772-59898,60025-60118,60119-60268,
60577-60624,60712-60819,61040-61114,61225-61275,
61341-61487,61584-61714,61944-62031,62204-62266,
62336-62582,62830-62981,63056-63126,63214-63370,
63520-63687
Length = 2323
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = +1
Query: 637 TLLFVYQTGCVHQPANPGSLVLL 705
TLLFVYQTG P PG L+LL
Sbjct: 693 TLLFVYQTGEDPPPPAPGGLLLL 715
>12_01_0418 -
3304741-3304904,3305579-3305762,3307254-3307347,
3308530-3308882,3309140-3309274,3309354-3309392,
3309587-3309652,3309739-3309834,3310291-3310527,
3310602-3310722,3310854-3310889,3313062-3313159,
3313298-3313591,3313842-3313904,3314280-3314438,
3314557-3314655
Length = 745
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -1
Query: 490 GSADTLFGVGAKYALDQDASLHAKINNKSLIGLGYQQKLRPGVTLTLSAAIDGQNFNAGG 311
G+AD+ FG+G L S + +++ S +GL QKL+P V + ++ + F A G
Sbjct: 645 GNADSTFGMG----LTSGQSQFSALDSSSRLGLKPWQKLKPSVEILCNSQANHYAFLALG 700
Query: 310 HKVGV 296
V
Sbjct: 701 SYTSV 705
>12_01_0767 -
6956758-6957138,6957491-6957581,6957796-6957861,
6958079-6958194
Length = 217
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = -3
Query: 536 GI*QAGLRRQHEVDG-GFGRHIIRSWSEVRAGPRR 435
G+ QAG RR+ V G GFG W E R G R
Sbjct: 167 GLAQAGHRREAVVVGDGFGTEAAPHWGEARGGRER 201
>06_03_0749 +
24133302-24134274,24134585-24135272,24135751-24135857,
24137565-24137815
Length = 672
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = -2
Query: 501 SGRRVRPTHYSELERSTRWTKTRLCTPRSTTSPSSVLVTNRNYAQA 364
S + + TH++ RS+ ++ +RLC P TT+P T+ + +A
Sbjct: 349 SSAKAQGTHHASSVRSS-FSNSRLCLPSRTTNPPPKNATSNSKTEA 393
>01_01_1166 +
9287840-9288040,9289752-9289799,9292166-9292282,
9293018-9293700,9295214-9297190,9298330-9298441,
9299848-9299904
Length = 1064
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 544 YQKVSDKLDCGVSMKWTAGSADTLFGVG 461
+QKV D+LDCG+ + T G + +G
Sbjct: 469 WQKVCDRLDCGLEINNTVGGMRKILSLG 496
>08_02_1207 -
25302186-25302275,25303089-25303141,25303400-25303788,
25303968-25304338,25304362-25304502
Length = 347
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 625 CSWRTLLFVYQTGCVHQPANPGSLVLLQRLQLD 723
CSW + + TG V P+ G L LLQ +QL+
Sbjct: 34 CSWDSGIICSDTGHVPIPSALGDLPLLQTIQLE 66
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = +1
Query: 568 HCLRLCGEQSHQIGNLEQS-CSWRTLLFVYQTGC---VHQPANPGSLVLLQRLQLD 723
H LR IG L S CS R L + + C P N GS+ LQRL L+
Sbjct: 686 HSLRYLNLSQTDIGKLPDSICSLRLLQTLQLSRCEKLTKLPQNIGSVTSLQRLDLE 741
>08_02_1596 +
28125331-28125556,28125986-28126047,28126160-28126199,
28126934-28127029,28127138-28127169,28127274-28127349,
28127430-28127483,28127916-28127941
Length = 203
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 275 ENITKPTLVDKYILLSQPNSVYRESISIVEI 183
E + + T+VDK I LS PNSV + + E+
Sbjct: 141 EGVAEATIVDKQIPLSGPNSVVGRAFVVHEL 171
>08_01_0800 - 7738035-7738381,7739951-7740521
Length = 305
Score = 28.3 bits (60), Expect = 7.9
Identities = 20/56 (35%), Positives = 22/56 (39%)
Frame = +3
Query: 660 WVCTPASQPW*FSTAATSTTGPAKSRSKLVFTATVSLVNEVFNFPVLVSSLWGKKC 827
+VC PA+ W T S LVF SL EVF P L KKC
Sbjct: 54 FVCNPATHRWVQLPPFTEYDSLCISAEYLVFDPAESLHYEVFLIPDLPEIPTKKKC 109
>06_03_0399 - 20403488-20405092
Length = 534
Score = 28.3 bits (60), Expect = 7.9
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = -1
Query: 706 AAVLNYQGWLAGVHTQFDTQKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKVS 530
AA + GW+ GV+ + + +K + + + Y+ D ++ + D G + Y+K +
Sbjct: 439 AAAAKHMGWIRGVYGEMEPYVSKNPRGAY-VNYRDLDLGVNDDGDGGGGVARARYEKAT 496
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,848,795
Number of Sequences: 37544
Number of extensions: 506880
Number of successful extensions: 1361
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2291695380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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