Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19o06f
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56CA4 Cluster: PREDICTED: similar to CG6647-PA,... 241 2e-62
UniRef50_UPI00015549B7 Cluster: PREDICTED: similar to eukaryotic... 201 1e-50
UniRef50_Q9Y277 Cluster: Voltage-dependent anion-selective chann... 191 1e-47
UniRef50_Q21752 Cluster: Probable voltage-dependent anion-select... 147 2e-34
UniRef50_Q9VKP2 Cluster: CG17137-PA; n=2; Sophophora|Rep: CG1713... 132 8e-30
UniRef50_Q86EN8 Cluster: Clone ZZD1582 mRNA sequence; n=1; Schis... 103 3e-21
UniRef50_P07144 Cluster: Outer mitochondrial membrane protein po... 99 1e-19
UniRef50_Q5KJP2 Cluster: Voltage-dependent ion-selective channel... 89 1e-16
UniRef50_UPI00005A081F Cluster: PREDICTED: similar to voltage-de... 86 9e-16
UniRef50_Q9P544 Cluster: Probable outer mitochondrial membrane p... 85 2e-15
UniRef50_UPI0000DB7468 Cluster: PREDICTED: similar to voltage-de... 80 6e-14
UniRef50_P42057 Cluster: Outer plastidial membrane protein porin... 68 3e-10
UniRef50_P40478 Cluster: Outer mitochondrial membrane protein po... 68 3e-10
UniRef50_P04840 Cluster: Outer mitochondrial membrane protein po... 66 6e-10
UniRef50_Q9FKM2 Cluster: Porin-like protein; n=1; Arabidopsis th... 56 1e-06
UniRef50_Q0CL92 Cluster: Outer mitochondrial membrane protein po... 54 4e-06
UniRef50_Q7Y1C6 Cluster: PgPOR29; n=6; Poaceae|Rep: PgPOR29 - Pe... 53 8e-06
UniRef50_Q0UTJ1 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q0MYW7 Cluster: Putative outer mitochondrial membrane p... 46 9e-04
UniRef50_UPI00015B435F Cluster: PREDICTED: similar to voltage de... 44 0.004
UniRef50_Q9VKP4 Cluster: CG17140-PA, isoform A; n=4; Sophophora|... 39 0.10
UniRef50_UPI0000DA3042 Cluster: PREDICTED: similar to voltage-de... 39 0.13
UniRef50_A7EUU7 Cluster: Putative uncharacterized protein; n=1; ... 39 0.13
UniRef50_Q4S3U6 Cluster: Chromosome 20 SCAF14744, whole genome s... 38 0.31
UniRef50_P04114 Cluster: Apolipoprotein B-100 precursor (Apo B-1... 37 0.54
UniRef50_UPI0000397283 Cluster: COG5295: Autotransporter adhesin... 34 2.9
UniRef50_Q18VY0 Cluster: Rhodanese-like precursor; n=4; Desulfit... 34 2.9
UniRef50_Q1CVE2 Cluster: Argininosuccinate synthase; n=5; Helico... 33 5.0
UniRef50_Q7TMA5 Cluster: Apolipoprotein B-100 precursor (Apo B-1... 33 5.0
UniRef50_Q65N14 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
UniRef50_A1ZGD0 Cluster: 30S ribosomal protein S16; n=1; Microsc... 33 6.6
UniRef50_Q4CR91 Cluster: Putative uncharacterized protein; n=2; ... 33 6.6
UniRef50_Q8EFU3 Cluster: Lipoprotein, putative; n=3; Shewanella ... 33 8.8
>UniRef50_UPI0000D56CA4 Cluster: PREDICTED: similar to CG6647-PA,
isoform A isoform 1; n=2; Tribolium castaneum|Rep:
PREDICTED: similar to CG6647-PA, isoform A isoform 1 -
Tribolium castaneum
Length = 347
Score = 241 bits (589), Expect = 2e-62
Identities = 107/163 (65%), Positives = 137/163 (84%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 278
MAPP Y+DLGKKA DVF KGYHFG+ KLD KTK+ SGVEF +G SNQESGKVFGSL +K
Sbjct: 66 MAPPPYSDLGKKAKDVFGKGYHFGLIKLDCKTKTGSGVEFNTGGVSNQESGKVFGSLETK 125
Query: 279 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND 458
+ VK+YGLTF+EKWNTDNTLAT++ IQD++ GLK++ + TF+PQTG+K+ ++KT+FTND
Sbjct: 126 YKVKEYGLTFSEKWNTDNTLATEVAIQDQLLKGLKLSSDLTFSPQTGSKSARVKTAFTND 185
Query: 459 TVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKV 587
VA+N ++DLD +GP++ AAV+ +QGWLAG T FDTQKSK+
Sbjct: 186 RVALNCDVDLDSSGPLIQAAAVVGHQGWLAGYQTAFDTQKSKL 228
Score = 72.1 bits (169), Expect = 1e-11
Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
Frame = +1
Query: 541 GWLV-YTPSLIHKKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKV 690
GWL Y + +K+K +KNNFALG+ +GDF LHTNVD+G++FGGSIYQK+
Sbjct: 212 GWLAGYQTAFDTQKSKLTKNNFALGFSTGDFILHTNVDDGQEFGGSIYQKL 262
>UniRef50_UPI00015549B7 Cluster: PREDICTED: similar to eukaryotic
translation elongation factor 1 alpha 1; n=5;
Mammalia|Rep: PREDICTED: similar to eukaryotic
translation elongation factor 1 alpha 1 -
Ornithorhynchus anatinus
Length = 343
Score = 201 bits (491), Expect = 1e-50
Identities = 89/163 (54%), Positives = 120/163 (73%)
Frame = +3
Query: 105 PPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFA 284
PP YADLGK A DVF+KGY FG+ KLDLKTKSE+G+EFTS ++N E+ KV GSL +K+
Sbjct: 17 PPAYADLGKAARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANSETSKVSGSLETKYK 76
Query: 285 VKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 464
+YGLTFTEKWNTDNTL T+IT++D++A GLK+T + +F+P TG K K+K+ + + +
Sbjct: 77 WAEYGLTFTEKWNTDNTLGTEITVEDQLAHGLKLTFDSSFSPNTGKKNAKVKSGYKREHI 136
Query: 465 AVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKVLQ 593
+ ++D D+AGP + A V Y GWLAG F+T KS+V Q
Sbjct: 137 NLGCDMDFDIAGPSIRGALVFGYDGWLAGYQMNFETTKSRVTQ 179
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +1
Query: 541 GWLV-YTPSLIHKKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKV 690
GWL Y + K++ +++NFA+GY++ +F LHTNV++G +FGGSIYQKV
Sbjct: 161 GWLAGYQMNFETTKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKV 211
>UniRef50_Q9Y277 Cluster: Voltage-dependent anion-selective channel
protein 3; n=146; Eumetazoa|Rep: Voltage-dependent
anion-selective channel protein 3 - Homo sapiens (Human)
Length = 283
Score = 191 bits (466), Expect = 1e-47
Identities = 88/162 (54%), Positives = 119/162 (73%)
Frame = +3
Query: 108 PYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFAV 287
P Y DLGK A DVF+KGY FG+ K+DLKTKS SGVEF++ + ++GK G+L +K+ V
Sbjct: 5 PTYCDLGKAAKDVFNKGYGFGMVKIDLKTKSCSGVEFSTSGHAYTDTGKASGNLETKYKV 64
Query: 288 KDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVA 467
+YGLTFT+KWNTDNTL T+I+ ++K+A GLK+TL+ F P TG K+GKLK S+ D +
Sbjct: 65 CNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKSGKLKASYKRDCFS 124
Query: 468 VNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKVLQ 593
V +N+D+D +GP + AVL ++GWLAG FDT KSK+ Q
Sbjct: 125 VGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQ 166
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Frame = +1
Query: 541 GWLV-YTPSLIHKKAKFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKV 690
GWL Y S K+K S+NNFALGY++ DF LHT+V++G +FGGSIYQKV
Sbjct: 148 GWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKV 198
>UniRef50_Q21752 Cluster: Probable voltage-dependent anion-selective
channel; n=2; Caenorhabditis|Rep: Probable
voltage-dependent anion-selective channel -
Caenorhabditis elegans
Length = 283
Score = 147 bits (357), Expect = 2e-34
Identities = 71/170 (41%), Positives = 103/170 (60%), Gaps = 2/170 (1%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESG--VEFTSGITSNQESGKVFGSLS 272
MAPP +ADLGK A D+F+KGY+FG K+D T++ VEF S + N SGK+ G+L
Sbjct: 1 MAPPTFADLGKSAKDLFNKGYNFGFLKIDSTTRAGDNKEVEFKSAASHNIGSGKLGGNLD 60
Query: 273 SKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFT 452
K+ + YG+T TEKWNT+N L T I + ++ GLKVTL+ +AP G ++GK+K +
Sbjct: 61 VKYKIPQYGITLTEKWNTENQLGTVIEVNEQFGRGLKVTLDSLYAPHAGKRSGKVKLDWA 120
Query: 453 NDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKVLQEQL 602
T V ++ + A PV++ A V + GWL G FD+ +K+ L
Sbjct: 121 LPTARVTADVGVTSA-PVINAAGVFSRDGWLIGAAATFDSSSNKLAATSL 169
Score = 39.1 bits (87), Expect = 0.10
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 535 RVGWLVYTPSLIHKKA-KFSKNNFALGYQSGDFALHTNVDNGKDFGGSIYQKV 690
R GWL+ + + K + + A G+ + + LH+ V N DFG S+Y KV
Sbjct: 146 RDGWLIGAAATFDSSSNKLAATSLAFGHSTPQYTLHSFVINSTDFGASLYHKV 198
>UniRef50_Q9VKP2 Cluster: CG17137-PA; n=2; Sophophora|Rep:
CG17137-PA - Drosophila melanogaster (Fruit fly)
Length = 293
Score = 132 bits (319), Expect = 8e-30
Identities = 64/161 (39%), Positives = 103/161 (63%), Gaps = 1/161 (0%)
Frame = +3
Query: 108 PYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEF-TSGITSNQESGKVFGSLSSKFA 284
P Y DLGK A D+F +GYH G++++D KT + SG+EF T+G S Q++ KV GSL SK+
Sbjct: 6 PTYPDLGKLARDLFKRGYHPGIWQIDCKTLTNSGIEFFTTGFAS-QDNSKVTGSLQSKYK 64
Query: 285 VKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 464
++D GLT TE+WNT+N L +I +DK+A GL + +E F P + GK K + D
Sbjct: 65 IEDQGLTLTERWNTENWLFGEIMHRDKLAQGLMLAVEAKFQPGSNEADGKFKMGYAQDNF 124
Query: 465 AVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKV 587
++ L+ + P+++ + V+ ++ +L GV T+FD +++
Sbjct: 125 NFLADIGLN-SEPILNCSLVVGHKEFLGGVGTEFDVGNTEL 164
>UniRef50_Q86EN8 Cluster: Clone ZZD1582 mRNA sequence; n=1;
Schistosoma japonicum|Rep: Clone ZZD1582 mRNA sequence -
Schistosoma japonicum (Blood fluke)
Length = 280
Score = 103 bits (248), Expect = 3e-21
Identities = 53/166 (31%), Positives = 88/166 (53%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 278
M PP ++DLGK A D+ K ++FGV+ + +TK ++ +E+ S ++ K++ L K
Sbjct: 1 MVPPSFSDLGKDARDLLFKKFYFGVYNIHCETK-KNNIEYKSNLSDGPRPNKMYFDLQEK 59
Query: 279 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTND 458
A YG T+KW+++N + +I +DK+ GLK T + + P L SF ND
Sbjct: 60 LAFPQYGFAITKKWSSNNVIDGEIVFEDKLVDGLKQTFQISRDPFKKCFNANLINSFRND 119
Query: 459 TVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKVLQE 596
V N + A P + + V YQG+L G + D +++LQ+
Sbjct: 120 HVNSNVEMFFKSAIPDLSPSLVFGYQGYLVGADVKLDC-TNQILQK 164
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 592 KNNFALGYQSGDFALHTNVDN-GKDFGGSIYQKV 690
K NFA+GY DFA H + N GK F +++Q++
Sbjct: 164 KANFAVGYTVQDFAFHGLITNWGKQFSANMFQRI 197
>UniRef50_P07144 Cluster: Outer mitochondrial membrane protein
porin; n=9; Pezizomycotina|Rep: Outer mitochondrial
membrane protein porin - Neurospora crassa
Length = 283
Score = 98.7 bits (235), Expect = 1e-19
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKG-YHFGVFKLDLKTKSESGVEFTSGITSNQESGKVF-GSLS 272
MA P ++D+ K AND+ +K YH +++K+ + + V F +T KV G+L
Sbjct: 1 MAVPAFSDIAKSANDLLNKDFYHLAAGTIEVKSNTPNNVAFK--VTGKSTHDKVTSGALE 58
Query: 273 SKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFT 452
KF K GLT T+ WNT N L T + + D +A GLK +F P T + K F
Sbjct: 59 GKFTDKPNGLTVTQTWNTANALETKVEMADNLAKGLKAEGIFSFLPATNARGAKFNLHFK 118
Query: 453 NDTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKV 587
DL L GP ++ A++ ++G+LAG +D QK+ +
Sbjct: 119 QSNFHGRAFFDL-LKGPTANIDAIVGHEGFLAGASAGYDVQKAAI 162
>UniRef50_Q5KJP2 Cluster: Voltage-dependent ion-selective channel,
putative; n=2; Basidiomycota|Rep: Voltage-dependent
ion-selective channel, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 292
Score = 89.0 bits (211), Expect = 1e-16
Identities = 47/155 (30%), Positives = 75/155 (48%)
Frame = +3
Query: 105 PPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFA 284
PP + DLGK ++D+ K Y L++KT + S V F T + ++ + G + K+
Sbjct: 6 PPSWRDLGKSSSDLLLKDYPIQGTSLEVKTLTPSNVAFKVAGTKDAKTDAISGDIEGKYV 65
Query: 285 VKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 464
GLTFT+ W T N L T + ++++IA GLK L T P +K+ L + ++
Sbjct: 66 DFKNGLTFTQGWTTTNVLRTQLELENQIAKGLKFDLATTLNPAKASKSAILTAIYKQPSL 125
Query: 465 AVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFD 569
+DL GP V+ G+L G +D
Sbjct: 126 HTRATVDL-FKGPTFTADTVVGRDGFLVGAEASYD 159
>UniRef50_UPI00005A081F Cluster: PREDICTED: similar to
voltage-dependent anion channel 2; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to voltage-dependent
anion channel 2 - Canis familiaris
Length = 129
Score = 85.8 bits (203), Expect = 9e-16
Identities = 39/92 (42%), Positives = 58/92 (63%)
Frame = +3
Query: 297 GLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVAVNT 476
GL +K NTDNTL T+ITI+D+I+ LK+T + TF+P K K+K+S+ + +
Sbjct: 35 GLVKLDKQNTDNTLGTEITIEDQISQDLKLTFDTTFSPNM-EKNSKIKSSYKRECINFGC 93
Query: 477 NLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDT 572
++D D AGP + + V Y+GWLAG FD+
Sbjct: 94 DVDFDFAGPAIYGSVVFGYEGWLAGYQMTFDS 125
Score = 39.1 bits (87), Expect = 0.10
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +3
Query: 114 YADLGKKANDVFSKGYHFGVFKLDLK-TKSESGVEFT 221
YADL K A D+F+KGY G+ KLD + T + G E T
Sbjct: 17 YADLDKAARDIFNKGYGLGLVKLDKQNTDNTLGTEIT 53
>UniRef50_Q9P544 Cluster: Probable outer mitochondrial membrane
protein porin; n=1; Schizosaccharomyces pombe|Rep:
Probable outer mitochondrial membrane protein porin -
Schizosaccharomyces pombe (Fission yeast)
Length = 282
Score = 85.0 bits (201), Expect = 2e-15
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQES-GKVFGSLSS 275
MAPP YA + K ND+ + + G L ++T + +GV F ++ NQ++ G + G L +
Sbjct: 1 MAPPAYAAINKLCNDLLQRDFPVGATLLSVRTTAPNGVVFN--VSGNQDAKGVISGKLET 58
Query: 276 KFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 455
F K GLT ++ W T N L + + + ++ A GL + + TF+P T KT L +
Sbjct: 59 SFNDKANGLTISQGWTTANVLESKVGLSEQFAPGLHLNVNTTFSPATAAKTAILNLEHQH 118
Query: 456 DTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKV 587
+ + +++ + D + ++G+LAG +D QK V
Sbjct: 119 PLIHTHASVNALERKFLGDF--TVGHEGFLAGAEFGYDVQKGNV 160
>UniRef50_UPI0000DB7468 Cluster: PREDICTED: similar to
voltage-dependent anion channel 2; n=1; Apis
mellifera|Rep: PREDICTED: similar to voltage-dependent
anion channel 2 - Apis mellifera
Length = 286
Score = 79.8 bits (188), Expect = 6e-14
Identities = 52/176 (29%), Positives = 92/176 (52%), Gaps = 8/176 (4%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKGYHFG--VFKLDLKTKSESGVEFTSGITSNQESGKVFGSLS 272
M+ P + DLGK A DVF+ GYH+G + KL +K KSE ++ S + ++ K+ G +
Sbjct: 1 MSAPNFKDLGKSARDVFTSGYHYGKTLIKLGVKAKSEI-LDMGSDLRLICDTSKLTGVMD 59
Query: 273 SKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFT 452
S++ ++YG + +KW TDN + TI D I + + E T+ P T K K+ +
Sbjct: 60 SQYK-RNYG-SIIQKWTTDNNVTLGHTIDDIIVPDIGLQSEVTYNPTTTAKLIKIGAKCS 117
Query: 453 ND------TVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKVLQEQL 602
+ ++ +T ++D+ G VV +G+L G ++T+ +K+ + L
Sbjct: 118 KELFNASCSITTDTQFNVDVLGSVVTA-----IKGFLIGYQGGYNTETNKITKNDL 168
>UniRef50_P42057 Cluster: Outer plastidial membrane protein porin;
n=24; Magnoliophyta|Rep: Outer plastidial membrane
protein porin - Zea mays (Maize)
Length = 277
Score = 67.7 bits (158), Expect = 3e-10
Identities = 48/156 (30%), Positives = 79/156 (50%)
Frame = +3
Query: 114 YADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFAVKD 293
Y D+GKK D+ K Y+ K L T S +GV T+ T ES +FG L ++ +K+
Sbjct: 8 YTDIGKKTRDLLYKDYNTHQ-KFCLTTSSPNGVAITAAGTRKNES--IFGELHTQ--IKN 62
Query: 294 YGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVAVN 473
LT K N+++ L T IT+ + GLK + Q ++GKL+ + ++ VN
Sbjct: 63 KKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQ---RSGKLEFQYLHEYAGVN 119
Query: 474 TNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKS 581
++ L+ + P+V+++ + GV FDT S
Sbjct: 120 ASVGLN-SNPMVNLSGAFGSKALSVGVDVSFDTATS 154
>UniRef50_P40478 Cluster: Outer mitochondrial membrane protein porin
2; n=2; Saccharomyces cerevisiae|Rep: Outer
mitochondrial membrane protein porin 2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 281
Score = 67.7 bits (158), Expect = 3e-10
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKGY-HFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSS 275
MA ++ D+ + N +F++ + H L++ T +E+GV FT G + S+
Sbjct: 1 MALRFFNDISRDVNGLFNRDFFHTNPLSLNISTTTENGVNFTLKAKQGVTEGPIQTSVEG 60
Query: 276 KFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 455
+F + G++ ++ W+ N L T I KIA G K + PQ+ K K S+
Sbjct: 61 RFYDRKEGVSLSQSWSNQNRLNTRIEF-SKIAPGWKGDVNAFLTPQS-IKNAKFNLSYAQ 118
Query: 456 DTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDT 572
+ A T++D+ V + L ++G++ G +DT
Sbjct: 119 KSFAARTSIDILQPKDFVG-SVTLGHRGFVGGTDIAYDT 156
>UniRef50_P04840 Cluster: Outer mitochondrial membrane protein porin
1; n=17; Ascomycota|Rep: Outer mitochondrial membrane
protein porin 1 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 283
Score = 66.5 bits (155), Expect = 6e-10
Identities = 41/164 (25%), Positives = 73/164 (44%), Gaps = 1/164 (0%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKG-YHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSS 275
M+PP Y+D+ + ND+ +K YH D++T + +G++F+ + G + ++ +
Sbjct: 1 MSPPVYSDISRNINDLLNKDFYHATPAAFDVQTTTANGIKFSLKAKQPVKDGPLSTNVEA 60
Query: 276 KFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTN 455
K K GL T+ W+ N L T + + + GLK L + P K+ L T+FT
Sbjct: 61 KLNDKQTGLGLTQGWSNTNNLQTKLEFAN-LTPGLKNELITSLTPGV-AKSAVLNTTFTQ 118
Query: 456 DTVAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKV 587
DL L P + ++G + G +D +
Sbjct: 119 PFFTARGAFDLCLKSPTFVGDLTMAHEGIVGGAEFGYDISAGSI 162
>UniRef50_Q9FKM2 Cluster: Porin-like protein; n=1; Arabidopsis
thaliana|Rep: Porin-like protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 274
Score = 55.6 bits (128), Expect = 1e-06
Identities = 41/162 (25%), Positives = 80/162 (49%)
Frame = +3
Query: 102 APPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKF 281
+P +AD+GKKA D+ +K Y F K L S +G EF + T ++ FG +S+ +
Sbjct: 4 SPAPFADIGKKAKDLLNKDYIFD-HKFTLTMLSATGTEFVA--TGLKKDDFFFGDISTLY 60
Query: 282 AVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDT 461
K K ++ ++++T +T+++ + + K + K+GKL + +
Sbjct: 61 --KGQNTIVDLKIDSHSSVSTKVTLKNLLPSA-KAVISFKIPDH---KSGKLDVQYVHPH 114
Query: 462 VAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKV 587
+N+++ L+ P++D++A + Q G FDT S +
Sbjct: 115 ATLNSSIGLN-PTPLLDLSATIGSQNVCLGGEVSFDTASSSL 155
>UniRef50_Q0CL92 Cluster: Outer mitochondrial membrane protein
porin; n=1; Aspergillus terreus NIH2624|Rep: Outer
mitochondrial membrane protein porin - Aspergillus
terreus (strain NIH 2624)
Length = 311
Score = 53.6 bits (123), Expect = 4e-06
Identities = 29/90 (32%), Positives = 43/90 (47%)
Frame = +3
Query: 318 WNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLDLA 497
W T N L T + + + IA GLK + + P +K KL F + DL L
Sbjct: 102 WTTANALDTKLELDNNIAKGLKAEILTQYLPAKQSKGAKLNLYFKQPNLNARAFFDL-LN 160
Query: 498 GPVVDVAAVLNYQGWLAGVHTQFDTQKSKV 587
GP + AVL ++G+L G +D QK+ +
Sbjct: 161 GPSANFDAVLGHEGFLVGAEGGYDVQKAAI 190
>UniRef50_Q7Y1C6 Cluster: PgPOR29; n=6; Poaceae|Rep: PgPOR29 -
Pennisetum americanum (Pearl millet)
Length = 277
Score = 52.8 bits (121), Expect = 8e-06
Identities = 42/160 (26%), Positives = 80/160 (50%)
Frame = +3
Query: 105 PPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFA 284
P ++D+GKKA D+ ++ Y + KL + T S SGV TS T+ ++ G +SS +
Sbjct: 6 PGLFSDIGKKAKDLLTRDYTYDQ-KLTVSTVSSSGVGLTS--TAVKKGGLYTLDVSSVYK 62
Query: 285 VKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 464
K+ + K +T++ ++T +T+ D + + VT P +GK++ + ++
Sbjct: 63 YKNTVVDI--KVDTESNISTTLTVLDALPSTKLVT--SVKLPD--YNSGKVELHYFHENA 116
Query: 465 AVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSK 584
++ T + PVV+++ + QG G +DT K
Sbjct: 117 SLATVVGTK-PSPVVELSGTVGAQGVTFGAEAGYDTASGK 155
>UniRef50_Q0UTJ1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 311
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/56 (37%), Positives = 30/56 (53%)
Frame = +3
Query: 297 GLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 464
G++ T+ WNT N LAT + + D A+GLK + FAP G K K+ F +
Sbjct: 127 GISITQSWNTANLLATKVELNDTFASGLKAEILSNFAPNAGNKGQKVNLHFKQPNI 182
Score = 44.4 bits (100), Expect = 0.003
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +3
Query: 105 PPYYADLGKKANDVFSKG-YHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKF 281
PP ++D+ K +ND+ +K YH L++K K+ +GV FT+ TS +G V SL K
Sbjct: 16 PPAFSDIAKASNDLINKDFYHTAAAALEVKLKAPNGVNFTAKGTS-AHNGPVTSSLEGKK 74
Query: 282 AVKD 293
A+ +
Sbjct: 75 ALSN 78
>UniRef50_Q0MYW7 Cluster: Putative outer mitochondrial membrane
protein porin; n=1; Emiliania huxleyi|Rep: Putative
outer mitochondrial membrane protein porin - Emiliania
huxleyi
Length = 286
Score = 46.0 bits (104), Expect = 9e-04
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 278
MAP + D+GK +D+ SK Y G +++K+K +G+ FT +++ K GSL++K
Sbjct: 1 MAPTAFKDIGKLCSDLLSKDYKTGSNSVEVKSKVPNGITFTP--KADKTGDKFSGSLAAK 58
Query: 279 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLE-GTFAP-QTG-TKTGKLKTSF 449
AV G T ++ + + + GL +TL+ T AP + G +GK +
Sbjct: 59 SAVPG-GADLEVTLKTSGVMSASLEAAN-MMKGLSLTLDCETPAPGKPGLLSSGKGTLDY 116
Query: 450 TNDTVAVNTNLD 485
D + + D
Sbjct: 117 KTDALTAKGSYD 128
>UniRef50_UPI00015B435F Cluster: PREDICTED: similar to voltage
dependent anion-selective channel; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to voltage dependent
anion-selective channel - Nasonia vitripennis
Length = 240
Score = 44.0 bits (99), Expect = 0.004
Identities = 29/102 (28%), Positives = 50/102 (49%)
Frame = +3
Query: 99 MAPPYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSK 278
M+ P Y +LGK A DVF +GY + + KL L K GVE + + + ++ GS K
Sbjct: 1 MSVPDYGELGKSARDVFREGYAYDLAKLKLSAK--LGVE--ADVAFDLRKSELTGSFLGK 56
Query: 279 FAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTF 404
++ YG F+ K + + L + + ++ + + TF
Sbjct: 57 YSTNGYG-QFSGKLSRPSLLTGEYKLNGFLSENVDLDAGYTF 97
>UniRef50_Q9VKP4 Cluster: CG17140-PA, isoform A; n=4;
Sophophora|Rep: CG17140-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 361
Score = 39.1 bits (87), Expect = 0.10
Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 2/168 (1%)
Frame = +3
Query: 108 PYYADLGKKANDVFSKGYHFGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFAV 287
P Y +G A D G+ G +++ T++++ + VFG + V
Sbjct: 83 PTYFHVGALAKDCLINGFKIGAWQMHCSTRTDNDFYLNTFGEGYPTMKNVFGGMEVFKEV 142
Query: 288 KDYGLTFTEKWNTDNTLATDITIQD-KIAAGLKVTLEGTFAPQTGTK-TGKLKTSFTNDT 461
+Y + W T+N L ++I ++ + L L+ T + KLK D
Sbjct: 143 GNYSTSLG--WFTNNDLLSEIAVRGMNFGSRLYGLLKSTIGTKDEVSFQTKLKCGLERDP 200
Query: 462 VAVNTNLDLDLAGPVVDVAAVLNYQGWLAGVHTQFDTQKSKVLQEQLC 605
V V + L + V + W+ G T+++ + + LC
Sbjct: 201 VKVELVVPLYNEPLFLGYVLVAPVENWVLGYRTEYNFDEKGFDKHALC 248
>UniRef50_UPI0000DA3042 Cluster: PREDICTED: similar to
voltage-dependent anion channel 1; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to voltage-dependent
anion channel 1 - Rattus norvegicus
Length = 86
Score = 38.7 bits (86), Expect = 0.13
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +3
Query: 186 LKTKSESGVEFTSGITSNQESGKVFGSLSSKFA-VKDYGLTFTEKWNTDNTLATDITIQD 362
+KTKSES +EFTS ++N E KV SL + + L FTEK +T AT +++D
Sbjct: 4 VKTKSESRLEFTSSGSANTERTKVNSSLKTTDRWTEACHLPFTEK-QIYSTEATKTSVED 62
Query: 363 KIAAGLKVTLEGTFAPQTGTKTG 431
+ A + +T G F G G
Sbjct: 63 QPRAKIALTF-GLFLLPLGGGVG 84
>UniRef50_A7EUU7 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 508
Score = 38.7 bits (86), Expect = 0.13
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Frame = +3
Query: 198 SESGVEFTSGITSNQES--GKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDI--TI-QD 362
+ES EF G+TSNQ S G+ F L++ + + ++ W + + ATD+ TI +D
Sbjct: 320 NESEREFLYGVTSNQPSTLGRYF--LTAAYLMINHDENTFTLWQANPSTATDLVPTISKD 377
Query: 363 KIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTVAVNTNLDLD-----LAGPVVDVAAVL 527
+ VT GT GT T + TS + NTN LAG VV + AV+
Sbjct: 378 TAESCANVTTNGTVV-VNGTVTTEPGTSSSTTAATTNTNTQTGLSPGALAGIVVGILAVV 436
>UniRef50_Q4S3U6 Cluster: Chromosome 20 SCAF14744, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 20 SCAF14744, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 94
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +3
Query: 93 TDMAPPYYADLGKKANDVFSKGY 161
T PP YADLGK A D+F+KGY
Sbjct: 10 TMAVPPCYADLGKSAKDIFNKGY 32
>UniRef50_P04114 Cluster: Apolipoprotein B-100 precursor (Apo B-100)
[Contains: Apolipoprotein B-48 (Apo B-48)]; n=122;
Tetrapoda|Rep: Apolipoprotein B-100 precursor (Apo B-100)
[Contains: Apolipoprotein B-48 (Apo B-48)] - Homo sapiens
(Human)
Length = 4563
Score = 36.7 bits (81), Expect = 0.54
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +3
Query: 249 GKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKT 428
G+ G L SKF +K L FT + + + + + I+A L+ + P T T
Sbjct: 1921 GEHTGQLYSKFLLKAEPLAFTFSHDYKGSTSHHLVSRKSISAALEHKVSALLTPAEQTGT 1980
Query: 429 GKLKTSFTND 458
KLKT F N+
Sbjct: 1981 WKLKTQFNNN 1990
>UniRef50_UPI0000397283 Cluster: COG5295: Autotransporter adhesin;
n=1; Haemophilus somnus 2336|Rep: COG5295:
Autotransporter adhesin - Haemophilus somnus 2336
Length = 2179
Score = 34.3 bits (75), Expect = 2.9
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Frame = +3
Query: 183 DLKTKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLATDITIQ- 359
DL+ ++SG++F + ++ +LS FA+K K+N+D T A +I ++
Sbjct: 1912 DLQAVAKSGLKF-----KGNDDMEIHTALSGTFAIKGEEGANGNKFNSDRTAAGNIKVEM 1966
Query: 360 DKIAAGLKVTLEGTFAPQTGTKT----GKLKTSFTNDTVAVNTNLD 485
+ GL+V L T +T G+ T +N + VN D
Sbjct: 1967 SQDGKGLEVKLSDQLKNMTSFETREVEGRKSTLNSNGLIVVNKGAD 2012
>UniRef50_Q18VY0 Cluster: Rhodanese-like precursor; n=4;
Desulfitobacterium hafniense|Rep: Rhodanese-like
precursor - Desulfitobacterium hafniense (strain DCB-2)
Length = 298
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -1
Query: 314 LCESQAIVFHCKFGGKAAKNLSAFL-VGGDSAGEFNTRLALGLQVEFENTKVIALAEDI 141
+ + ++ HCK GG+A KNL AFL G +A + A + F TK+ A +E +
Sbjct: 130 VAKDAVVLVHCKSGGRAKKNLQAFLDKGYVNAFALDGWTAFDAKGYFGATKITASSEQL 188
>UniRef50_Q1CVE2 Cluster: Argininosuccinate synthase; n=5;
Helicobacter|Rep: Argininosuccinate synthase -
Helicobacter pylori (strain HPAG1)
Length = 350
Score = 33.5 bits (73), Expect = 5.0
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Frame = +3
Query: 285 VKDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 464
+KDYGL + EK L TDI + +KI LK E F K G+ N +
Sbjct: 206 IKDYGLKYYEK-PGGGCLLTDIQVSNKI-KNLKEYREMVFEDSVIVKNGRYFVLPHNARL 263
Query: 465 AVNTNLD----LDLAGPVVDVAAVLNYQGWLA 548
V N + LD+ P++D +L+ +G L+
Sbjct: 264 VVARNEEENHKLDIQHPLMDKIELLSCKGPLS 295
>UniRef50_Q7TMA5 Cluster: Apolipoprotein B-100 precursor (Apo B-100)
[Contains: Apolipoprotein B-48 (Apo B-48)]; n=20;
Eukaryota|Rep: Apolipoprotein B-100 precursor (Apo B-100)
[Contains: Apolipoprotein B-48 (Apo B-48)] - Rattus
norvegicus (Rat)
Length = 4743
Score = 33.5 bits (73), Expect = 5.0
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = +3
Query: 162 HFG-VFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTL 338
HF VF+ L + TSG G+ G + SKF +K L T + +
Sbjct: 1860 HFNNVFRFVLAPFTLGVDTHTSGDGKMSLWGEHTGQMYSKFLLKAEPLALTFSHDYKGST 1919
Query: 339 ATDITIQDKIAAGLKVTLEGTFAPQTGTKTGKLKTSFTNDTV 464
+ ++ ++ ++ L+ TL P T + K KTS ND V
Sbjct: 1920 SHNLLYKNSVSTALEHTLSALLTPAEQTSSWKFKTSL-NDKV 1960
>UniRef50_Q65N14 Cluster: Putative uncharacterized protein; n=1;
Bacillus licheniformis ATCC 14580|Rep: Putative
uncharacterized protein - Bacillus licheniformis (strain
DSM 13 / ATCC 14580)
Length = 1975
Score = 33.1 bits (72), Expect = 6.6
Identities = 24/92 (26%), Positives = 40/92 (43%)
Frame = +3
Query: 165 FGVFKLDLKTKSESGVEFTSGITSNQESGKVFGSLSSKFAVKDYGLTFTEKWNTDNTLAT 344
FG L L + S + T ++++G + + D G F K+N D T A
Sbjct: 585 FGSADLHLVSDSLKVIPITFNQNGSEQAGTPLTE-GKDYTLSDNGSGFEIKFNQDVTGAY 643
Query: 345 DITIQDKIAAGLKVTLEGTFAPQTGTKTGKLK 440
IT Q ++ +G+ + T+ T TG+ K
Sbjct: 644 KITYQTEVNSGVIIDKSTTYTNTAVTGTGESK 675
>UniRef50_A1ZGD0 Cluster: 30S ribosomal protein S16; n=1;
Microscilla marina ATCC 23134|Rep: 30S ribosomal protein
S16 - Microscilla marina ATCC 23134
Length = 184
Score = 33.1 bits (72), Expect = 6.6
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = +3
Query: 354 IQDKIAAGLKVTLEGTFAPQTGTKTGKL--KTSFTNDTVAVNTNLDLDLAGPVVDVAAVL 527
+ D + A K +G F + GT T +D A+ LD A P V A+L
Sbjct: 16 LYDVVIADRKAPRDGRFIEKIGTYNPHTVPATIVLDDERALKWVLDG--AQPTDTVKAML 73
Query: 528 NYQGWLAGVHTQFDTQKSKVLQEQLCSRLPIW 623
+Y+G L H + +K + +EQ + W
Sbjct: 74 SYRGVLIRKHLEIGVRKGAITEEQAAQKFEEW 105
>UniRef50_Q4CR91 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 1603
Score = 33.1 bits (72), Expect = 6.6
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 424 LVPVCGAKVPSRVTLRPAAILSWIVMSVANVLSVFHFSVKVK 299
L P+C P L +A + +SVANV+S++H S + K
Sbjct: 250 LFPLCSLDEPLMTVLYDSAERQLVALSVANVISIYHVSEEFK 291
>UniRef50_Q8EFU3 Cluster: Lipoprotein, putative; n=3; Shewanella
oneidensis|Rep: Lipoprotein, putative - Shewanella
oneidensis
Length = 1422
Score = 32.7 bits (71), Expect = 8.8
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Frame = +3
Query: 123 LGKKANDVFSKGYHFGVFKLD--LKTKSESGVEFTSGITSNQESGKVFGSLSSKFA---V 287
L N ++S Y F K D + T +SG S T ++ S V S+ +A V
Sbjct: 1022 LSSGVNTIYSTPYAFAALKDDGSVVTWGDSGYGGDSSATIDKLSSGVNTIYSTNYAFAAV 1081
Query: 288 KDYGLTFTEKWNTDNTLATDITIQDKIAAGLKVTLEGTFA 407
K+ G T W D+ T+ DK+ +G+K T A
Sbjct: 1082 KNDGSVVT--WGDDDAGGDSRTVADKLTSGVKTIYSTTGA 1119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,395,061
Number of Sequences: 1657284
Number of extensions: 14241739
Number of successful extensions: 40693
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 39150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40672
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -