Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19o02f
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56966-2|AAA98718.1| 755|Caenorhabditis elegans Unidentified vi... 31 1.1
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 30 1.4
Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical pr... 30 1.9
AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like ... 30 1.9
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 29 2.4
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 29 2.4
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 27 9.9
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical p... 27 9.9
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 27 9.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 9.9
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 27 9.9
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 27 9.9
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 9.9
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 27 9.9
>U56966-2|AAA98718.1| 755|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 3 protein.
Length = 755
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +2
Query: 173 IQERGLDPIYVEKAEGDYTFPISDIFSASGTVAELALEGISNVVVNDVTFNLLRPTTF 346
+QE+G D IYV+K + I+++ + EL G V+ V+ LL F
Sbjct: 491 LQEKGFDDIYVQKKHAENCTAIAELPRVLAKIDELKNTGDEKTVLEYVSRGLLAGNVF 548
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 30.3 bits (65), Expect = 1.4
Identities = 29/119 (24%), Positives = 57/119 (47%)
Frame = -3
Query: 588 TSLPKRTTLRADSTLPTVRTALSSLTLMLGSNRKLTVETRRISSTTRLPLLATANSLPKM 409
TSL T S++P++ T+++S + +GS TV SST+ P + + + M
Sbjct: 596 TSLGTIMTTPGTSSIPSISTSVNSGSSTIGS----TVTQAPSSSTSMGPSPSQSTAGSTM 651
Query: 408 VA*PLTATAEALSLGRARSMLNVVGLKRLKVTSLTTTLLMPSRANSATVPDALKMSEIG 232
+ P ++ + + G + S V ++ +V+S T+ + S ++T + S IG
Sbjct: 652 TSAPPVTSSSSANTG-STSSGTTVSVQTTQVSSTTSPVASSSSQMTSTQQPSGSSSSIG 709
>Z92811-5|CAN86600.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 560 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERI 679
L V+ D+ EKL D L + ++ ETY +++RE++ERI
Sbjct: 602 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERI 644
>Z92811-4|CAB07273.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 560 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERI 679
L V+ D+ EKL D L + ++ ETY +++RE++ERI
Sbjct: 602 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERI 644
>Z82271-8|CAN86621.1| 1580|Caenorhabditis elegans Hypothetical
protein T01G1.1c protein.
Length = 1580
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 560 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERI 679
L V+ D+ EKL D L + ++ ETY +++RE++ERI
Sbjct: 602 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERI 644
>Z82271-7|CAB05214.2| 1605|Caenorhabditis elegans Hypothetical
protein T01G1.1a protein.
Length = 1605
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 560 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERI 679
L V+ D+ EKL D L + ++ ETY +++RE++ERI
Sbjct: 602 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERI 644
>AB035591-1|BAB18763.1| 1609|Caenorhabditis elegans kinesin like
protein KLP-12 protein.
Length = 1609
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 560 LKVVLFGNDVSEKLNDALNN---RLPELLETYNEQIREIVERI 679
L V+ D+ EKL D L + ++ ETY +++RE++ERI
Sbjct: 606 LSEVMIELDIKEKLIDQLERAERQNQQIRETYEKKLRELMERI 648
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical protein
C25A1.7 protein.
Length = 970
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 334 SQKVESDVIDDNVADALESQFGYCARCAEDVRN 236
SQ + + D+N + +ES+ YC RC + RN
Sbjct: 921 SQVILHENRDENSVELVESRLRYCERCRKHTRN 953
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 334 SQKVESDVIDDNVADALESQFGYCARCAEDVRN 236
SQ + + D+N + +ES+ YC RC + RN
Sbjct: 921 SQVILHENRDENSVELVESRLRYCERCRKHTRN 953
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = -3
Query: 588 TSLPKRTTLRADSTLPTVRTALSSLTLMLGSNRKLT-VETRRISSTTRLPLLATANSLPK 412
T+ P + T A +TLPT AL + T + K+T V T ++TT+ P T L
Sbjct: 354 TTTPVKVT-PATTTLPTTSLALETTTTATRTTAKITAVATVARTNTTQPP---TTTPLSS 409
Query: 411 MVA*PLTATAEA 376
A P T T+ +
Sbjct: 410 TTALPTTLTSSS 421
>Z81098-2|CAB03182.1| 961|Caenorhabditis elegans Hypothetical
protein K07A12.2 protein.
Length = 961
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 473 VSTVSLRLLPSI-NVRELSAVLTVGNVESALKVVLFGNDVSEKLNDALNNRLPELLETYN 649
VS +L LPS+ ++ L V GN+ + ++ + F N+ + +L NN + ++
Sbjct: 278 VSNNALYALPSLKDLPNLKQVRVDGNLITKIETLAFSNNPNLQLISVQNNNIVQISRNSF 337
Query: 650 EQIREIVERIILFIINN 700
E + ++V +L + NN
Sbjct: 338 ESLDKLV---VLLVGNN 351
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 401 QATIFGREL-AVASSGSLVVEDIRLVSTVSLRLLPSINVRELSAVLTVGNVESALKVVLF 577
+A +G + A SG+ V+D+RL+ + + + N +S ++ G V K F
Sbjct: 365 EAVAYGAAIMAAVLSGAEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTF 424
Query: 578 GNDVSEKLNDALNNRLPE---LLETYNEQIREI 667
N S+ ++N + E +L ++N Q+ EI
Sbjct: 425 IN--SDDFQTSINVPVYEGERVLCSHNRQLGEI 455
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 401 QATIFGREL-AVASSGSLVVEDIRLVSTVSLRLLPSINVRELSAVLTVGNVESALKVVLF 577
+A +G + A SG+ V+D+RL+ + + + N +S ++ G V K F
Sbjct: 365 EAVAYGAAIMAAVLSGAEEVQDMRLIDVIPMSIGVQCNRDYMSVLIKKGTVFPCTKRKTF 424
Query: 578 GNDVSEKLNDALNNRLPE---LLETYNEQIREI 667
N S+ ++N + E +L ++N Q+ EI
Sbjct: 425 IN--SDDFQTSINVPVYEGERVLCSHNRQLGEI 455
>Z70208-11|CAA94144.1| 598|Caenorhabditis elegans Hypothetical
protein F54B11.11 protein.
Length = 598
Score = 27.5 bits (58), Expect = 9.9
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Frame = -3
Query: 570 TTLRADSTLPTVRTALSSLTLMLGSNRKLTVETRRI----SSTTRLPLL---ATANSLPK 412
T +T P + T SS T L S +T I ++TT P+ AT P
Sbjct: 465 TAASGTTTQPILSTMTSSTTKTLTSTTTITTTKANILTTTATTTTPPVTSAPATTFITPV 524
Query: 411 MVA*PLTATAEALSLGRARSMLNVVGLKRLKVTSLTTTLLMP 286
P+T + S ++ +GL +V+ TTT P
Sbjct: 525 PFTPPVTNSTTIYSSNTGSTLSTTIGLPITQVSVQTTTQTAP 566
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/45 (26%), Positives = 27/45 (60%)
Frame = +2
Query: 542 GNVESALKVVLFGNDVSEKLNDALNNRLPELLETYNEQIREIVER 676
G++E L+++ G D++ + LN+ E ++E +RE+++R
Sbjct: 44 GDLEKVLELLRAGTDINTSNANGLNSLHLASKEGHSEVVRELIKR 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,854,462
Number of Sequences: 27780
Number of extensions: 273866
Number of successful extensions: 1041
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1041
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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