Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19n24r
         (809 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    57   2e-10
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          25   1.1  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   4.4  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   4.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   7.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 57.2 bits (132), Expect = 2e-10
 Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
 Frame = -3

Query: 771 YPTYDDTRPNLVQPNDISLLRLHRPVVFTRYLQP--IRVQSSADAFRNYDGLTVYASGHG 598
           +P YD    +  Q NDI+LL+  + + F   + P  +  Q   D+F   D +TV   GH 
Sbjct: 242 HPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSD-VTVLGWGHT 300

Query: 597 RLWTNGATPEVLNWVYLRAVANPTCALNFGTLITPNAICARFFNVTSQSTCQGDSGGPLV 418
               NG    +L    L  +    C   +G ++  NA+CA       +  CQ DSGGP++
Sbjct: 301 SF--NGMLSHILQKTTLNMLTQVECYKYYGNIMV-NAMCAY---AKGKDACQMDSGGPVL 354

Query: 417 HVDPQGVPIL-IGVTSFVAGGEFGCHSGFPAGFIRPGPFHDW 295
             +P+   ++ IG+ S+  G E G    +P G  + G + DW
Sbjct: 355 WQNPRTKRLVNIGIISW--GAECG---KYPNGNTKVGSYIDW 391


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 271 IYSRDTIEPVMERSRTNETSWETRVTTEFAASNKGGHTDQNRYTLRIHV 417
           +Y R   E + E SR+N T W     TE   + + GH   N+  +  ++
Sbjct: 553 LYGRCKREGI-ELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNL 600


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 388 DRCDLLCCWR 359
           D CDL+CC R
Sbjct: 111 DGCDLMCCGR 120


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 388 DRCDLLCCWR 359
           D CDL+CC R
Sbjct: 112 DGCDLMCCGR 121


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 622 HRVCQRSWSSLDEWCYSR 569
           H+ C R W  +   C SR
Sbjct: 18  HQRCSRDWFRISAGCVSR 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,803
Number of Sequences: 438
Number of extensions: 4003
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)