Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19n20r
(814 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 47 2e-07
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 25 1.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 25 1.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.5
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.4
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 5.9
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 5.9
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 5.9
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 5.9
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 47.2 bits (107), Expect = 2e-07
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 5/230 (2%)
Frame = -3
Query: 776 SFTNKVVLVTXXXXXXXXXXAVHFAKEGADVAIVGRNVTKLDNVARECAQVGKKPLIIKA 597
++ ++V LVT +G V + V K+ + E K + ++
Sbjct: 4 NWIDEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKLVPLQC 63
Query: 596 DISNDEEAKTIVQQTIDAFGKLDVLINNAGMNKSGSLLAGNLLESYDAVTATNLRAVILI 417
D+SN + +++ G +D+LINNA +N +L +L+ + + NL + +
Sbjct: 64 DLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLD-WKKIFDINLLGLTCM 122
Query: 416 TSLAAPHLIE---TKGNIINVSSIGG-TMVPM-PGFLAYCMGKASLNHFTRGIALELAPR 252
+ + G I+N++ G ++PM AY K +L T + ELA
Sbjct: 123 IQEVLKLMKKKGINNGIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQC 182
Query: 251 GVRANIISPGPVLTDIIENSDNQISWDIFRAATALKKLGEPSEIAELMLF 102
+IS P D++E +D W + ALK P +++ +LF
Sbjct: 183 ESNIKVISISP---DLVE-TDMTAQWLKENSRLALK----PKDVSNCVLF 224
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 63 VRASYASSFVTCQEQHQLRYF*RFS*FLQRRGSPKNVPANLIIRILND 206
V +Y + + +++ + +F F F + SP ANL R+LND
Sbjct: 440 VNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLND 487
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 63 VRASYASSFVTCQEQHQLRYF*RFS*FLQRRGSPKNVPANLIIRILND 206
V +Y + + +++ + +F F F + SP ANL R+LND
Sbjct: 440 VNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLND 487
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 1.5
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 373 MFPFVSMRCGAARLVIKMTALRLVAVTASYDSRRLPASRDPDLFIPALLMSTS 531
+ P + + C V T L V S P ++P +F+P MST+
Sbjct: 787 ILPMIPVYCVPVPQVNDSTILSPVREKLSSSQPMQPPQQNPYMFLPVSYMSTT 839
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = -3
Query: 242 ANIISPGPVLTDIIENSDNQISWDIFRAATALKKLGEPSEIAELMLF 102
+ + PG + + Q+ ++ T +LG+PS I++ LF
Sbjct: 507 SEVRQPGKAPNYSVNWTIGQLEAEVINCTTGKDELGKPSRISKQGLF 553
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.2 bits (45), Expect = 5.9
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 551 IDAFGKLDVLINNAGMNKSGSLLAGN 474
ID +GK + G+N G+++ GN
Sbjct: 346 IDEYGKKIDIYTPEGLNMLGNVIEGN 371
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 387 LDEVRSRKARYQNDRSQ 437
LDE++ + R+Q+ RS+
Sbjct: 127 LDEIKKKTTRFQDSRSK 143
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 387 LDEVRSRKARYQNDRSQ 437
LDE++ + R+Q+ RS+
Sbjct: 127 LDEIKKKTTRFQDSRSK 143
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.2 bits (45), Expect = 5.9
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = +3
Query: 387 LDEVRSRKARYQNDRSQ 437
LDE++ + R+Q+ RS+
Sbjct: 127 LDEIKKKTTRFQDSRSK 143
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,975
Number of Sequences: 438
Number of extensions: 4631
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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