Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19n20f
(784 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 47 2e-07
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 25 1.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 25 1.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.4
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 3.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 5.6
AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin prot... 22 5.6
AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin prot... 22 5.6
AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin prot... 22 5.6
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 9.8
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 9.8
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.8
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 9.8
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.8
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.8
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 47.2 bits (107), Expect = 2e-07
Identities = 52/230 (22%), Positives = 96/230 (41%), Gaps = 5/230 (2%)
Frame = +3
Query: 39 SFTNKVVLVTXXXXXXXXXXXVHFAKEGADVAIVGRNVTKLDNVARECAQVGKKPLIIKA 218
++ ++V LVT +G V + V K+ + E K + ++
Sbjct: 4 NWIDEVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKLVPLQC 63
Query: 219 DISNDEEAKTIVQQTIDAFGKLDVLINNAGMNKSGSLLAGNLLESYDAVTATNLRAVILI 398
D+SN + +++ G +D+LINNA +N +L +L+ + + NL + +
Sbjct: 64 DLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLD-WKKIFDINLLGLTCM 122
Query: 399 TSLAAPHLIE---TKGNIINVSSIGG-TMVPM-PGFLAYCMGKASLNHFTRGIALELAPR 563
+ + G I+N++ G ++PM AY K +L T + ELA
Sbjct: 123 IQEVLKLMKKKGINNGIIVNINDASGLNLLPMNRNRPAYLASKCALTTLTDCLRSELAQC 182
Query: 564 GVRANIISPGPVLTDIIENSDNQISWDIFRAATALKKLGEPSEIAELMLF 713
+IS P D++E +D W + ALK P +++ +LF
Sbjct: 183 ESNIKVISISP---DLVE-TDMTAQWLKENSRLALK----PKDVSNCVLF 224
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -3
Query: 752 VRASYASSFVTCQEQHQLRYF*RFS*FLQRRGSPKNVPANLIIRILND 609
V +Y + + +++ + +F F F + SP ANL R+LND
Sbjct: 440 VNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLND 487
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 24.6 bits (51), Expect = 1.1
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -3
Query: 752 VRASYASSFVTCQEQHQLRYF*RFS*FLQRRGSPKNVPANLIIRILND 609
V +Y + + +++ + +F F F + SP ANL R+LND
Sbjct: 440 VNENYKTVNLAAEKKDKNSFFNMFKKFASLKKSPYFKEANLNTRMLND 487
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 1.4
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = -1
Query: 442 MFPFVSMRCGAARLVIKMTALRLVAVTASYDSRRLPASRDPDLFIPALLMSTS 284
+ P + + C V T L V S P ++P +F+P MST+
Sbjct: 787 ILPMIPVYCVPVPQVNDSTILSPVREKLSSSQPMQPPQQNPYMFLPVSYMSTT 839
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 23.0 bits (47), Expect = 3.2
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +3
Query: 573 ANIISPGPVLTDIIENSDNQISWDIFRAATALKKLGEPSEIAELMLF 713
+ + PG + + Q+ ++ T +LG+PS I++ LF
Sbjct: 507 SEVRQPGKAPNYSVNWTIGQLEAEVINCTTGKDELGKPSRISKQGLF 553
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.2 bits (45), Expect = 5.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 264 IDAFGKLDVLINNAGMNKSGSLLAGN 341
ID +GK + G+N G+++ GN
Sbjct: 346 IDEYGKKIDIYTPEGLNMLGNVIEGN 371
>AB073998-1|BAC76402.1| 339|Apis mellifera preprotachykinin
protein.
Length = 339
Score = 22.2 bits (45), Expect = 5.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 428 LDEVRSRKARYQNDRSQ 378
LDE++ + R+Q+ RS+
Sbjct: 127 LDEIKKKTTRFQDSRSK 143
>AB073996-1|BAC76400.1| 215|Apis mellifera preprotachykinin
protein.
Length = 215
Score = 22.2 bits (45), Expect = 5.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 428 LDEVRSRKARYQNDRSQ 378
LDE++ + R+Q+ RS+
Sbjct: 127 LDEIKKKTTRFQDSRSK 143
>AB073995-1|BAC76399.1| 301|Apis mellifera preprotachykinin
protein.
Length = 301
Score = 22.2 bits (45), Expect = 5.6
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -3
Query: 428 LDEVRSRKARYQNDRSQ 378
LDE++ + R+Q+ RS+
Sbjct: 127 LDEIKKKTTRFQDSRSK 143
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 9.8
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 564 GVRANIISPGPVLTDIIENSDNQIS 638
G +AN PG DIIE D ++S
Sbjct: 354 GSKANSPFPGSTEADIIELQDLRMS 378
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.4 bits (43), Expect = 9.8
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 452 IQYRWNHGTNA 484
I+Y+WN G N+
Sbjct: 166 IRYKWNEGPNS 176
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.4 bits (43), Expect = 9.8
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -2
Query: 279 SRRRQWFAERWSSL 238
+RR WF+E W +
Sbjct: 275 NRRNPWFSEYWEEV 288
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.4 bits (43), Expect = 9.8
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +2
Query: 452 IQYRWNHGTNA 484
I+Y+WN G N+
Sbjct: 105 IRYKWNEGPNS 115
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = -3
Query: 455 GYVYDVSLRLDEVRSRKARYQNDRSQISRCD 363
GYV +S +E+ R +QN+ Q S D
Sbjct: 326 GYVKPISPEQEELIHRLVYFQNEYEQPSEED 356
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.4 bits (43), Expect = 9.8
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -2
Query: 279 SRRRQWFAERWSSL 238
+RR WF+E W +
Sbjct: 365 NRRNPWFSEYWEEV 378
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,651
Number of Sequences: 438
Number of extensions: 4452
Number of successful extensions: 24
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24639531
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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