Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19n11r
(847 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 286 3e-78
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 79 6e-16
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 77 4e-15
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 75 1e-14
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 71 2e-13
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 71 2e-13
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 69 1e-12
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 66 4e-12
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 66 8e-12
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 65 1e-11
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 64 2e-11
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 61 2e-10
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 53 6e-08
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 50 4e-07
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 49 1e-06
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 47 4e-06
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 47 4e-06
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 45 2e-05
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 44 2e-05
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 42 1e-04
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 36 0.007
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 35 0.017
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 34 0.022
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 33 0.051
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 32 0.089
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 32 0.12
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 30 0.36
SPCC1020.08 |||wybutosine biosynthesis protein Tyw1|Schizosaccha... 30 0.47
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 30 0.47
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 29 1.1
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 1.4
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1... 27 3.3
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.3
SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6 |Schizosacc... 27 3.3
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 27 4.4
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 27 4.4
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce... 26 5.8
SPBC83.14c |rfc5||DNA replication factor C complex subunit Rfc5 ... 26 5.8
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 26 5.8
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 26 5.8
SPCC1620.08 |||succinate-CoA ligase |Schizosaccharomyces pombe|c... 26 7.7
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 286 bits (701), Expect = 3e-78
Identities = 142/272 (52%), Positives = 187/272 (68%), Gaps = 3/272 (1%)
Frame = -2
Query: 840 LYYGILEEARTMALKQHEGMTVMYTAMGSEWRPFGHPRRRRPIHSVVLRSGLTERIVADC 661
++ +L EA+ + T +YTA +EW+PFGHPR +R + SVVL S + + I D
Sbjct: 165 IFSELLLEAQKFMQSAQKNKTTIYTAWATEWKPFGHPRSKRMLSSVVLESNVKKMITDDV 224
Query: 660 LDFINNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSERGLTDDR 481
DF+ N QWY RGIPYRRGYLLYGPPG GK+SF+ ALAGEL+Y+ICVLNL+E+GLTDDR
Sbjct: 225 HDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDR 284
Query: 480 LNHLLSVAPQQSIILLEDIDAAFVSREDTPTQKAAYEGLN-RVTFSGLLNCLDGVASTEA 304
LNHLLS P ++++LLED+D+AF RE ++ G + VTFSGLLN LDGV S++
Sbjct: 285 LNHLLSNVPPKAVVLLEDVDSAFQGRE-----RSGEVGFHANVTFSGLLNALDGVTSSDE 339
Query: 303 RIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLRFYKGEKAADHAKTFAEK 124
RI+FMTTN+ E+LDPAL+RPGRVD+K Y+G EQV MF RFY H+ A+
Sbjct: 340 RIIFMTTNHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFY------GHSPEMADD 393
Query: 123 VMEV--KKEVSPAQIQGYFMFHKHSPPEDVLM 34
+ ++ K S A +QG F+ +K SP + V M
Sbjct: 394 LSDIVCPKNTSMASLQGLFVMNKSSPADAVDM 425
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 79.4 bits (187), Expect = 6e-16
Identities = 54/149 (36%), Positives = 79/149 (53%), Gaps = 7/149 (4%)
Frame = -2
Query: 651 INNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSER-----GLTD 487
+ +P+ + GIP +G LLYGPPG GK+ A+A + ++ SE G
Sbjct: 165 VKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGS 224
Query: 486 DRLNHLLSVAPQQ--SIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVAS 313
+ L +A + SII +++ID+ SR D+ E + R T LLN LDG +
Sbjct: 225 RMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSE-VQR-TMLELLNQLDGFEA 282
Query: 312 TEARIVFMTTNYLERLDPALIRPGRVDMK 226
T+ V M TN ++ LDPAL+RPGR+D K
Sbjct: 283 TKNIKVIMATNRIDILDPALLRPGRIDRK 311
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 76.6 bits (180), Expect = 4e-15
Identities = 62/203 (30%), Positives = 98/203 (48%), Gaps = 7/203 (3%)
Frame = -2
Query: 672 VADCLDFINNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSER-- 499
+ + + F+ NP++Y G RG +L GPPG GK+ A AGE ++ SE
Sbjct: 308 IMEFVKFLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLE 367
Query: 498 ---GLTDDRLNHLLSVAPQQS--IILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLN 334
G+ R+ L + A + + II +++IDA +R + E T + LL
Sbjct: 368 MFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDE--RESTLNQLLV 425
Query: 333 CLDGVASTEARIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLRFYKGEKA 154
+DG S+E +VF TN + LDPAL+RPGR D + + + E +F K KA
Sbjct: 426 EMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKA 485
Query: 153 ADHAKTFAEKVMEVKKEVSPAQI 85
AD+ A+++ + + A I
Sbjct: 486 ADNIDLIAKRLAVLTSGFTGADI 508
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 75.4 bits (177), Expect = 1e-14
Identities = 55/150 (36%), Positives = 79/150 (52%), Gaps = 8/150 (5%)
Frame = -2
Query: 651 INNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELE---YNICVLNLSERGLTDD- 484
+ +P+ Y + GI +G +LYG PG GK+ A+A + + L ++ L D
Sbjct: 211 LTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP 270
Query: 483 RLNHLLSVAPQQ---SIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVAS 313
RL L A ++ SI+ +++IDA R D Q A + R T LLN LDG +
Sbjct: 271 RLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDA--QSGAEREIQR-TMLELLNQLDGFDT 327
Query: 312 TEARI-VFMTTNYLERLDPALIRPGRVDMK 226
++ I V M TN + LDPALIRPGR+D K
Sbjct: 328 SQRDIKVIMATNRISDLDPALIRPGRIDRK 357
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 71.3 bits (167), Expect = 2e-13
Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Frame = -2
Query: 633 YTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSE-----RGLTDDRLNHL 469
Y GI RG LLYGPPG GK+ + A+A N + SE G + +
Sbjct: 160 YRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDV 219
Query: 468 LSVAPQQS--IILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVASTEARIV 295
+A + + II +++IDA R D T A + R+ LL +DG V
Sbjct: 220 FRMARENAPAIIFIDEIDAIATKRFDAQT--GADREVQRILIE-LLTQMDGFDQGANVKV 276
Query: 294 FMTTNYLERLDPALIRPGRVDMK-EYVGYCNQEQVELMF 181
M TN + LDPAL+RPGR+D K E+ Y ++ Q L+F
Sbjct: 277 IMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVF 315
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 70.9 bits (166), Expect = 2e-13
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 11/161 (6%)
Frame = -2
Query: 666 DCLDFINNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSE----- 502
+ +DF+ +P +T G RG LL GPPG GK+ A+AGE ++ S+
Sbjct: 281 EIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMY 340
Query: 501 RGLTDDRLNHLLSVAPQQ--SIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCL 328
G+ R+ L + A +Q SII ++++DA R + AA+ R T + LL L
Sbjct: 341 VGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRN---ARDAAH---MRQTLNQLLVDL 394
Query: 327 DGVASTE---ARIVFM-TTNYLERLDPALIRPGRVDMKEYV 217
DG + E +VF+ TN+ E LDPAL RPGR D +V
Sbjct: 395 DGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHV 435
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 68.5 bits (160), Expect = 1e-12
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Frame = -2
Query: 651 INNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSER-----GLTD 487
+ + + ++ G+ +G LLYGPPGC K+ A+A E N + E G ++
Sbjct: 568 LTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESE 627
Query: 486 DRLNHLLSVAPQQS--IILLEDIDAAFVSR-EDTPTQKAAYEGLNRVTFSGLLNCLDGVA 316
+ + A Q S +I ++IDA +R ED + + + LLN LDG+
Sbjct: 628 RAVRQVFQKARQASPSVIFFDEIDALTANRGEDNSSDRVV---------AALLNELDGIE 678
Query: 315 STEARIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQE 199
+ +V TN + +DPAL+RPGR+D YVG N E
Sbjct: 679 ALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFE 717
Score = 64.5 bits (150), Expect = 2e-11
Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 7/151 (4%)
Frame = -2
Query: 645 NPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSE-----RGLTDDR 481
NP+ + I RG LLYGPPG GK+ + A+A E + ++ G T+ R
Sbjct: 301 NPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESR 360
Query: 480 LNHLL--SVAPQQSIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVASTE 307
L + + A Q SII +++IDA R + + E +R + LL LDG+A+
Sbjct: 361 LRKIFEDARAHQPSIIFIDEIDALAPKRTEDVS-----EAESRAV-ATLLTLLDGMANAG 414
Query: 306 ARIVFMTTNYLERLDPALIRPGRVDMKEYVG 214
+V TN +D AL RPGR++ + +G
Sbjct: 415 KVVVIAATNRPNSIDEALRRPGRLEKEIEIG 445
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 66.5 bits (155), Expect = 4e-12
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 11/167 (6%)
Frame = -2
Query: 651 INNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNIC------VLNL----SE 502
I P+ Y GI G LL+GPPGCGK+ A+A E + N +LN SE
Sbjct: 512 IKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLNKYVGESE 571
Query: 501 RGLTDDRLNHLLSVAPQQSIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDG 322
R + R L + A +I +++DA R+D+ + E +RV + LL LDG
Sbjct: 572 RAV---RQVFLRARASSPCVIFFDELDAMVPRRDDSLS-----EASSRVV-NTLLTELDG 622
Query: 321 VASTEARIVFMTTNYLERLDPALIRPGRVDMKEYVGYCN-QEQVELM 184
++ V TN + +DPA++RPGR+D V + E+VE++
Sbjct: 623 LSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEIL 669
Score = 60.9 bits (141), Expect = 2e-10
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 11/176 (6%)
Frame = -2
Query: 651 INNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSE-----RGLTD 487
I +P+ Y GI RG LL+GPPGCGK+ ALA EL ++ G ++
Sbjct: 194 IKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELGVPFISISAPSIVSGMSGESE 253
Query: 486 DRLNHLLSVAPQQS--IILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVA- 316
++ + A + ++ +++IDA TP +++A + R + L C+D ++
Sbjct: 254 KKVREVFEEAKSLAPCLMFIDEIDAV------TPKRESAQREMERRIVAQFLTCMDELSF 307
Query: 315 -STEAR--IVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLRFYKGEK 157
T+ + +V TN + LD AL R GR D + + +Q+ E + KG K
Sbjct: 308 EKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQDAREKILRTMAKGLK 363
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 65.7 bits (153), Expect = 8e-12
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 11/192 (5%)
Frame = -2
Query: 690 GLTERI--VADCLDF-INNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNIC 520
GL E+I + + ++ + NP+ + GI +G LLYGPPG GK+ A+A L N
Sbjct: 136 GLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFL 195
Query: 519 VLNLSER-----GLTDDRLNHLLSVAPQQS--IILLEDIDAAFVSREDTPTQKAAYEGLN 361
+ S G + + + A + +I +++IDA R T +A +
Sbjct: 196 KVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGT--SADREIQ 253
Query: 360 RVTFSGLLNCLDGVASTEARIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQ-EQVELM 184
R T LLN +DG + M TN + LDPAL+RPGR+D K + N+ ++E++
Sbjct: 254 R-TLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEIL 312
Query: 183 FLRFYKGEKAAD 148
+ K K +
Sbjct: 313 KIHLEKVSKQGE 324
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 64.9 bits (151), Expect = 1e-11
Identities = 56/176 (31%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Frame = -2
Query: 651 INNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSE-----RGLTD 487
+ +PQ + GI RG L+YGPPG GK+ A+A E ++N E G ++
Sbjct: 244 LRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESE 303
Query: 486 DRLNHLLSVAPQQS--IILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVAS 313
L A + S II +++ID+ RE T + + R S LL +DG+ +
Sbjct: 304 SNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGE------VERRVVSQLLTLMDGMKA 357
Query: 312 TEARIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLRFY-KGEKAAD 148
+V TN +DPAL R GR D + VG + L LR + K K AD
Sbjct: 358 RSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTG-RLEILRIHTKNMKLAD 412
Score = 59.7 bits (138), Expect = 5e-10
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 11/175 (6%)
Frame = -2
Query: 690 GLTERIVADCLDFINNPQWYTDR----GIPYRRGYLLYGPPGCGKSSFIMALAGELEYNI 523
G E + + + + P Y ++ G+ +G L +GPPG GK+ A+A E N
Sbjct: 500 GGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANF 559
Query: 522 CVLNLSER-----GLTDDRLNHLLSVAPQQS--IILLEDIDAAFVSREDTPTQKAAYEGL 364
+ E G ++ + + A + ++ L+++D+ +R + G
Sbjct: 560 ISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSG---GG 616
Query: 363 NRVTFSGLLNCLDGVASTEARIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQE 199
+RV + LL +DGV S + V TN +++DPAL+RPGR+D YV ++E
Sbjct: 617 DRVV-NQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDEE 670
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 64.1 bits (149), Expect = 2e-11
Identities = 52/165 (31%), Positives = 82/165 (49%), Gaps = 7/165 (4%)
Frame = -2
Query: 621 GIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVL---NLSERGLTDDR--LNHLLSVA 457
G+ +G L++GPPG GK+ A A + L L + + D + ++A
Sbjct: 215 GVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALA 274
Query: 456 PQQS--IILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVASTEARIVFMTT 283
++S II ++++DA R D+ +KA + R T LLN LDG +S + V T
Sbjct: 275 KEKSPAIIFIDELDAIGTKRFDS--EKAGDREVQR-TMLELLNQLDGFSSDDRVKVIAAT 331
Query: 282 NYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLRFYKGEKAAD 148
N ++ LDPAL+R GR+D K N E+ + LR + + A D
Sbjct: 332 NRVDTLDPALLRSGRLDRKLEFPLPN-EEARVGILRIHSRKMAID 375
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 61.3 bits (142), Expect = 2e-10
Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 9/159 (5%)
Frame = -2
Query: 624 RGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSER-----GLTDDRLNHLLSV 460
+G+ R G LLYGPPG GK+ A+A EL + E G ++ + ++
Sbjct: 683 QGLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEK 742
Query: 459 APQQS--IILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVASTEARIVFM- 289
A S +I +++D+ R ++ ++RV S LL LD ++ + VF+
Sbjct: 743 ARNSSPCVIFFDELDSIAPHRGNSSDSGNV---MDRVV-SQLLAELDSISKDNNKYVFVI 798
Query: 288 -TTNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLR 175
TN + LDP+L+RPGR D Y+G E+ + LR
Sbjct: 799 GATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLR 837
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 52.8 bits (121), Expect = 6e-08
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 8/137 (5%)
Frame = -2
Query: 606 RGYLLYGPPGCGKSSFIMALAGELEY-NICVLNLSERGLTDDRLNHLLSVAPQQSIILLE 430
RG L +GPPG GK+ ALA N V +G D L+ + A +Q +L E
Sbjct: 301 RGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGA--DCLSKWVGEAERQLRLLFE 358
Query: 429 DIDAA-----FVSRED--TPTQKAAYEGLNRVTFSGLLNCLDGVASTEARIVFMTTNYLE 271
+ + F D P + + E ++ S LL +DG+ S I+ TN +
Sbjct: 359 EAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMESRGQVIIIGATNRPD 418
Query: 270 RLDPALIRPGRVDMKEY 220
+DPAL RPGR D + Y
Sbjct: 419 AVDPALRRPGRFDREFY 435
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 50.0 bits (114), Expect = 4e-07
Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Frame = -2
Query: 645 NPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSER-----GLTDDR 481
+P+ + GI +G +LYGPPG GK+ A+A + + SE G
Sbjct: 201 SPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARM 260
Query: 480 LNHLLSVA--PQQSIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVASTE 307
+ L +A + II ++IDA +R D A + + T L+ LDG
Sbjct: 261 VRELFEMARTKKACIIFFDEIDAIGGARFD---DGAGGDNEVQRTMLELITQLDGFDPRG 317
Query: 306 ARIVFMTTNYLERLDPALIRPGRVDMKEYVG 214
V TN LD AL+RPGR+D K G
Sbjct: 318 NIKVLFATNRPNTLDEALMRPGRIDRKVEFG 348
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 48.8 bits (111), Expect = 1e-06
Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 7/155 (4%)
Frame = -2
Query: 642 PQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSERGLTDDRLNHLLS 463
P+ + I RG L +GPPG GK+ LA ++ R D L+ +
Sbjct: 395 PEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRK-GSDCLSKWVG 453
Query: 462 VAPQQSIILLEDI-----DAAFVSRED--TPTQKAAYEGLNRVTFSGLLNCLDGVASTEA 304
A +Q +L E+ F D P + + E + S LL +DG+ +
Sbjct: 454 EAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLALMDGLDTRGQ 513
Query: 303 RIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQE 199
+V TN LDPAL RPGR D + Y N++
Sbjct: 514 VVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQ 548
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 46.8 bits (106), Expect = 4e-06
Identities = 40/154 (25%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Frame = -2
Query: 678 RIVADCLDFINNPQWYTDRG--IPYRRGYLLYGPPGCGKSSFIMALAGELE---YNICVL 514
+++ D L + P+ + G + +G LLYGPPGCGK+ ALA + + N+ V
Sbjct: 100 QLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALAKQSQATFINVSVG 159
Query: 513 NLSER--GLTDDRLNHLLSVAP--QQSIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFS 346
L+++ G ++ ++ L ++A + +II +++ID R Q+ +E + ++ +
Sbjct: 160 LLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQR-----QRTDHEAMAQIK-A 213
Query: 345 GLLNCLDGVASTEARIVFM-TTNYLERLDPALIR 247
++ DG+ S ++R++ + TN +D A+ R
Sbjct: 214 EFMSMWDGLLSGQSRVLVLGATNRPADIDEAIRR 247
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 46.8 bits (106), Expect = 4e-06
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 7/143 (4%)
Frame = -2
Query: 603 GYLLYGPPGCGKSSFIMALAGELEYNICVLNLSER-----GLTDDRLNHLLSVAPQQS-- 445
G LL+G PGCGK+ A++ + E G ++ + L S A
Sbjct: 642 GILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPC 701
Query: 444 IILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVASTEARIVFMTTNYLERL 265
++ ++ D+ R T G+ + +L +DG S + + T + +
Sbjct: 702 VLFFDEFDSVAPRRGQDST------GVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMI 755
Query: 264 DPALIRPGRVDMKEYVGYCNQEQ 196
DPAL+RPGR+D + N+E+
Sbjct: 756 DPALLRPGRLDKLIFCDLPNEEE 778
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 44.8 bits (101), Expect = 2e-05
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 8/165 (4%)
Frame = -2
Query: 651 INNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMAL---AGELEYNICVLNLSER--GLTD 487
I PQ ++ P+ G LLYGPPG GKS A+ AG ++I +L + G ++
Sbjct: 149 IKLPQLFSHGRKPWS-GILLYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESE 207
Query: 486 DRLNHLLSVAPQQ--SIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVAS 313
+ L +A +Q SII +++ID+ SR + + E R+ L+ ++GV
Sbjct: 208 RLVRQLFEMAREQKPSIIFIDEIDSLCGSRSEGES-----ESSRRIKTEFLVQ-MNGVGK 261
Query: 312 TEARIVFM-TTNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMF 181
E+ ++ + TN LD A+ R R + + Y+ N MF
Sbjct: 262 DESGVLVLGATNIPWTLDSAIRR--RFEKRIYIPLPNAHARARMF 304
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 44.4 bits (100), Expect = 2e-05
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 26/214 (12%)
Frame = -2
Query: 621 GIPYRRGYLLYGPPGCGKSSFIMALAGEL---EYNIC----VLNLSERGLTDDRLNHLLS 463
GI + +G LLYGPPG GK+ + L E I +LN G +++ + L +
Sbjct: 300 GINHVKGILLYGPPGTGKTLIARQIGKMLNAREPKIVNGPEILN-KYVGQSEENVRKLFA 358
Query: 462 VAPQQ----------SIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVAS 313
A ++ II+ +++DA R + G+ + LL +DGV
Sbjct: 359 DAEREYRDRGEESGLHIIIFDELDAICKKRGSS----GGDTGVGDQVVNQLLAKMDGVDQ 414
Query: 312 TEARIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLRFYKGEKAAD---HA 142
+V TN + +D AL+RPGR+++ + E L L+ + A++
Sbjct: 415 LNNILVIGMTNRKDMIDEALLRPGRLEVHMEIS-LPDEHGRLQILKIHTSRMASNGILEN 473
Query: 141 KTFAEKVMEVKKEVSPAQIQGY------FMFHKH 58
E++ + K S A+I G F F++H
Sbjct: 474 DVDMEELASLTKNFSGAEIAGLIKSASSFAFYRH 507
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 41.5 bits (93), Expect = 1e-04
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Frame = -2
Query: 606 RGYLLYGPPGCGKSSFIMALAGELE---YNICVLNLSERGLTDDR--LNHLLSVAPQQ-- 448
+G LL+GPPG GK+ A+A E + ++I +L+ + L D + L VA +Q
Sbjct: 413 QGMLLFGPPGTGKTMLARAVATEAKATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTC 472
Query: 447 SIILLEDIDAAFVSREDT 394
S+I +++ID+ +R D+
Sbjct: 473 SVIFVDEIDSILSARNDS 490
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 35.9 bits (79), Expect = 0.007
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Frame = -2
Query: 606 RGYLLYGPPGCGKSSFIMALAGE---LEYNICVLNLSER--GLTDDRLNHLLSVAPQ--Q 448
RG LL+GPPG GK+ A+A E + ++I +L+ + G ++ + L ++A +
Sbjct: 493 RGMLLFGPPGTGKTMLARAVATESRSVFFSISASSLTSKFLGESEKLVRALFTLAKKLSP 552
Query: 447 SIILLEDIDAAFVSR 403
SII +++ID+ +R
Sbjct: 553 SIIFVDEIDSLLSAR 567
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 34.7 bits (76), Expect = 0.017
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 18/164 (10%)
Frame = -2
Query: 624 RGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSERGLTD--DRLNH------- 472
RG + L GPPG GK+S ++A L N S GLTD + H
Sbjct: 566 RGTMQGKIMCLVGPPGVGKTSVGKSIASAL--NREFFRFSVGGLTDVAEIKGHRRTYIGA 623
Query: 471 --------LLSVAPQQSIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVA 316
L V + +IL+++ID S + P A E L+ S L+ +
Sbjct: 624 MPGKIVQALKKVQTENPLILIDEIDKVGKSHQGDPA-SALLELLDSEQNSAFLDYYMDIP 682
Query: 315 STEARIVFM-TTNYLERLDPALIRPGRVDMKEYVGYCNQEQVEL 187
+ ++F+ T N ++ + P L+ R+++ E GY + E+V +
Sbjct: 683 LDVSSVLFVCTANTIDTIPPPLL--DRMEVIELSGYVSAEKVNI 724
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 34.3 bits (75), Expect = 0.022
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = -2
Query: 624 RGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSER 499
R + + LL G PG GK+S I ALA E + + +NLS++
Sbjct: 1554 RALQVLKPILLEGSPGVGKTSLITALARETGHQLVRINLSDQ 1595
Score = 33.5 bits (73), Expect = 0.039
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 621 GIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSERGLTDDRL 478
G+ LL G G GK++ I LAG L + V+N+S++ + D L
Sbjct: 463 GVQTNEPLLLVGETGTGKTTTIQLLAGLLGQKVTVINMSQQTESSDML 510
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 33.1 bits (72), Expect = 0.051
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -2
Query: 639 QWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNI 523
QW + R L+ GP GCGKS+ + LA EL Y++
Sbjct: 96 QWMLTDSLESRL-LLICGPSGCGKSTAVQVLAKELGYSL 133
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 32.3 bits (70), Expect = 0.089
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = -2
Query: 615 PYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNL 508
P + ++ GP G GKSS I AL GEL N NL
Sbjct: 639 PRNKLSIVIGPTGSGKSSLISALLGELSLNKGSYNL 674
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = -2
Query: 597 LLYGPPGCGKSSFIMALAGELEYNICVLNLSERGLTDDR 481
L YGPPG GK+S I+A A ++ L E +DDR
Sbjct: 60 LFYGPPGTGKTSTILACARKIYGPNYRNQLMELNASDDR 98
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 30.3 bits (65), Expect = 0.36
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = -2
Query: 651 INNPQWYTDRGIPYRRGY-LLYGPPGCGKSSFIMALAG 541
+N PQ Y G+ L+ GPPG GK+ I+ + G
Sbjct: 1271 VNEPQAYAIYASSVNDGFTLIQGPPGTGKTKTILGMIG 1308
>SPCC1020.08 |||wybutosine biosynthesis protein
Tyw1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 688
Score = 29.9 bits (64), Expect = 0.47
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = -2
Query: 330 LDGVASTEARIVFMT-TNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLRFYKGEKA 154
L G A A+ V ++ L+R D L+ VD+ EY C + + L+ L Y+ E +
Sbjct: 98 LGGTAERYAKQVHEELSSLLQRDDIQLLNLDYVDLSEYFVSCPENAIYLVVLPSYEIESS 157
Query: 153 AD-HAKTFAEKVMEVKKEVSPAQ-IQGYFMF 67
D + + E + + P + GY +F
Sbjct: 158 IDYYLSSLQESFSDFRVPKDPLHGLSGYAVF 188
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 29.9 bits (64), Expect = 0.47
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2
Query: 597 LLYGPPGCGKSSFIMALAGEL 535
L YG PG GK+S I+AL+ EL
Sbjct: 56 LFYGSPGTGKTSTILALSREL 76
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = -2
Query: 621 GIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSE---RGLTDDRL 478
G+ + LL GPPG GK++ +A Y++ LN S+ + L D++L
Sbjct: 405 GLGLYKAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLDEQL 455
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 28.3 bits (60), Expect = 1.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -2
Query: 618 IPYRRGYLLYGPPGCGKSSFIMALAGEL 535
IP + L+ G G GKS+ MAL GEL
Sbjct: 604 IPRNQFTLVVGSTGSGKSTLAMALLGEL 631
>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +1
Query: 211 VSNVFFHIYTPWPDQGRIKPLQIVRRHKDDP 303
+ ++FF Y P P + PL HKD P
Sbjct: 234 IMDIFFENYQPTPKSPLVNPLYYPTGHKDLP 264
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 3.3
Identities = 31/124 (25%), Positives = 57/124 (45%)
Frame = +2
Query: 182 NISSTCSWLQYPTYSFISTRPGLIRAGSSLSK*FVVIKTIRASVDATPSKQFSSPLNVTR 361
++SS+ S Q P+ S S+ A +S S ++ ++ +S ++PS SS L +
Sbjct: 177 SLSSSTSSSQ-PSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSS-SSSPSSSSSSTLTSSS 234
Query: 362 LRPSYAAFWVGVSSRDTNAASMSSSKIIDCCGATLSK*FNRSSVKPRSDKLSTQILYSSS 541
L S SS +++ S SSS ++ S + SS S ++ + SSS
Sbjct: 235 LSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSSTISSSS 294
Query: 542 PANA 553
+++
Sbjct: 295 SSSS 298
>SPAC23H3.06 |apl6||AP-3 adaptor complex subunit Apl6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 745
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -2
Query: 141 KTFAEKVMEVKKEVSPAQIQGYFMFHKHSPPEDV 40
KTFA++ +EVK ++ ++ Y + H D+
Sbjct: 484 KTFADETLEVKYQILELSVRLYVLSHSEEKQNDL 517
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.6 bits (56), Expect = 4.4
Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 8/156 (5%)
Frame = +2
Query: 116 SITFSANVLAWSAA-FSPL*NLKNISSTCSWLQYPTYSFISTRPGLIRAGSSLSK*FV-- 286
S T S ++L+++ P N+ N S + +YPT S + + G A +S S V
Sbjct: 124 SNTDSTSILSFNTIRLIPSTNVINTSHYKGFNRYPTISS-TVKVGKRAATASFSYTNVSS 182
Query: 287 -VIKTIRASVDAT----PSKQFSSPLNVTRLRPSYAAFWVGVSSRDTNAASMSSSKIIDC 451
VI T S +T PS + S+P +T+ S V+S ++ A+ S I
Sbjct: 183 SVIATAYTSASSTILSSPSVEQSTPSIITQTESSTTTEGSSVASSESTIANSDQSSFI-- 240
Query: 452 CGATLSK*FNRSSVKPRSDKLSTQILYSSSPANAMI 559
T N ++ K + + ST+ SS+ A + I
Sbjct: 241 ---TYESTQNPTANKTDASQQSTESTSSSASAYSYI 273
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 4.4
Identities = 28/121 (23%), Positives = 52/121 (42%)
Frame = +2
Query: 191 STCSWLQYPTYSFISTRPGLIRAGSSLSK*FVVIKTIRASVDATPSKQFSSPLNVTRLRP 370
ST S T S S P +I G+ S + + + ++ S S + ++
Sbjct: 117 STSSLSYSGTISSTSIAPSMI--GTRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSS 174
Query: 371 SYAAFWVGVSSRDTNAASMSSSKIIDCCGATLSK*FNRSSVKPRSDKLSTQILYSSSPAN 550
S + SS ++++S SSSK ++ + SS K S S+ + S++PA+
Sbjct: 175 SSKSSSSSSSSSKSSSSSSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPAS 234
Query: 551 A 553
+
Sbjct: 235 S 235
>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 26.2 bits (55), Expect = 5.8
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 561 FIMALAGELEYNICVLNLSERGLTDDRLNHLLSVAP 454
F++ L+YN + NLS+ GL RL H + P
Sbjct: 245 FVITFWNNLKYNSQIENLSQHGL-HSRLTHFFTNMP 279
>SPBC83.14c |rfc5||DNA replication factor C complex subunit Rfc5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 358
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 597 LLYGPPGCGKSSFIMALAGEL 535
L+YGP G GK + ++A+ EL
Sbjct: 38 LVYGPSGAGKKTRVVAILREL 58
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 588 GPPGCGKSSFIMALAGEL 535
GP G GKS+ I L GEL
Sbjct: 707 GPNGAGKSTLIKVLTGEL 724
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 26.2 bits (55), Expect = 5.8
Identities = 35/147 (23%), Positives = 68/147 (46%), Gaps = 8/147 (5%)
Frame = -2
Query: 588 GPPGCGKSSFIMALAGELEYNICVLNLSERGLTDDRLNHLLSVAPQQSIILLEDIDAAFV 409
GP G GK+ + A++ L N+ V N + + +LS Q + D
Sbjct: 1890 GPAGTGKTETVKAVSAYLGKNVFVFN-CDNAFNYKTIQRILSGLAQIGTYICFD----EF 1944
Query: 408 SREDTPTQKAAYEGLNRVTFSGLLNCLDGVAST----EARIVFMTTN--YLERLD-PALI 250
+R D+ T A + R+ L++ DG+ + +A +F+T N YL R P+ +
Sbjct: 1945 NRLDSGTLSAISYDIQRI--QSLVSHSDGLCQSPILLDAPTIFVTMNPGYLGRFKLPSNL 2002
Query: 249 RPGRVDMKEYVGYCNQEQV-ELMFLRF 172
+ ++ ++G + +++ E++FL F
Sbjct: 2003 K--KLFRPIWMGSPDNKKICEILFLSF 2027
>SPCC1620.08 |||succinate-CoA ligase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 433
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 411 VSREDTPTQKAAYEGLNRVTFSGLLNCL 328
+S+ED +AA GLN + G + CL
Sbjct: 264 ISQEDPDEARAAKVGLNFIKLDGNIGCL 291
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,345,417
Number of Sequences: 5004
Number of extensions: 67097
Number of successful extensions: 258
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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