Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19n11f
         (756 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089691-1|AAL90429.1|  431|Drosophila melanogaster RH68195p pro...   316   2e-86
AY075442-1|ABF85762.1|  437|Drosophila melanogaster RE04126p pro...   316   2e-86
AE014134-1783|AAN10723.1|  431|Drosophila melanogaster CG4908-PB...   316   2e-86
AE014134-1782|AAF52876.1|  431|Drosophila melanogaster CG4908-PA...   316   2e-86

>AY089691-1|AAL90429.1|  431|Drosophila melanogaster RH68195p
           protein.
          Length = 431

 Score =  316 bits (776), Expect = 2e-86
 Identities = 141/212 (66%), Positives = 169/212 (79%)
 Frame = +3

Query: 120 MTIVEYMASLAQNPYXXXXXXXXXXXXXXXILRKGLQTSMVLFRRHCMITLEVPCRDKSY 299
           MT+ + +A L+ NPY               ILRKGLQ  ++LFRRHCMITLEVPCRDKSY
Sbjct: 1   MTLPDLVAGLSSNPYFGAGFGLFGVGAAAAILRKGLQGGVILFRRHCMITLEVPCRDKSY 60

Query: 300 QWLLQWITQKGARKTQHLSVETSFEQKDSGQIRTKYDFIPSVGQHFFRYGGTWIRVDRTR 479
           QWLL+WIT +GARKTQHLSVET+F Q D+G I+T YDFIPS+G+H F+Y G WI+V+RTR
Sbjct: 61  QWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTR 120

Query: 480 EQQTLDLHMGIPWETVTLTSFGRNKQLYYGILEEARTMALKQHEGMTVMYTAMGSEWRPF 659
           EQQTLDLHMG+PWETVTLT+FG NK +Y+ ILEEAR +AL+  EG TV+YTAMG+EWRPF
Sbjct: 121 EQQTLDLHMGVPWETVTLTAFGNNKGIYFDILEEARQLALEATEGKTVLYTAMGAEWRPF 180

Query: 660 GHPRRRRPIHSVVLRSGLTERIVADCLDFINN 755
           GHPRRRRP  SVVL  G ++RI+ADC DFI +
Sbjct: 181 GHPRRRRPTGSVVLDRGTSQRIIADCQDFIKS 212


>AY075442-1|ABF85762.1|  437|Drosophila melanogaster RE04126p
           protein.
          Length = 437

 Score =  316 bits (776), Expect = 2e-86
 Identities = 141/212 (66%), Positives = 169/212 (79%)
 Frame = +3

Query: 120 MTIVEYMASLAQNPYXXXXXXXXXXXXXXXILRKGLQTSMVLFRRHCMITLEVPCRDKSY 299
           MT+ + +A L+ NPY               ILRKGLQ  ++LFRRHCMITLEVPCRDKSY
Sbjct: 1   MTLPDLVAGLSSNPYFGAGFGLFGVGAAAAILRKGLQGGVILFRRHCMITLEVPCRDKSY 60

Query: 300 QWLLQWITQKGARKTQHLSVETSFEQKDSGQIRTKYDFIPSVGQHFFRYGGTWIRVDRTR 479
           QWLL+WIT +GARKTQHLSVET+F Q D+G I+T YDFIPS+G+H F+Y G WI+V+RTR
Sbjct: 61  QWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTR 120

Query: 480 EQQTLDLHMGIPWETVTLTSFGRNKQLYYGILEEARTMALKQHEGMTVMYTAMGSEWRPF 659
           EQQTLDLHMG+PWETVTLT+FG NK +Y+ ILEEAR +AL+  EG TV+YTAMG+EWRPF
Sbjct: 121 EQQTLDLHMGVPWETVTLTAFGNNKGIYFDILEEARQLALEATEGKTVLYTAMGAEWRPF 180

Query: 660 GHPRRRRPIHSVVLRSGLTERIVADCLDFINN 755
           GHPRRRRP  SVVL  G ++RI+ADC DFI +
Sbjct: 181 GHPRRRRPTGSVVLDRGTSQRIIADCQDFIKS 212


>AE014134-1783|AAN10723.1|  431|Drosophila melanogaster CG4908-PB,
           isoform B protein.
          Length = 431

 Score =  316 bits (776), Expect = 2e-86
 Identities = 141/212 (66%), Positives = 169/212 (79%)
 Frame = +3

Query: 120 MTIVEYMASLAQNPYXXXXXXXXXXXXXXXILRKGLQTSMVLFRRHCMITLEVPCRDKSY 299
           MT+ + +A L+ NPY               ILRKGLQ  ++LFRRHCMITLEVPCRDKSY
Sbjct: 1   MTLPDLVAGLSSNPYFGAGFGLFGVGAAAAILRKGLQGGVILFRRHCMITLEVPCRDKSY 60

Query: 300 QWLLQWITQKGARKTQHLSVETSFEQKDSGQIRTKYDFIPSVGQHFFRYGGTWIRVDRTR 479
           QWLL+WIT +GARKTQHLSVET+F Q D+G I+T YDFIPS+G+H F+Y G WI+V+RTR
Sbjct: 61  QWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTR 120

Query: 480 EQQTLDLHMGIPWETVTLTSFGRNKQLYYGILEEARTMALKQHEGMTVMYTAMGSEWRPF 659
           EQQTLDLHMG+PWETVTLT+FG NK +Y+ ILEEAR +AL+  EG TV+YTAMG+EWRPF
Sbjct: 121 EQQTLDLHMGVPWETVTLTAFGNNKGIYFDILEEARQLALEATEGKTVLYTAMGAEWRPF 180

Query: 660 GHPRRRRPIHSVVLRSGLTERIVADCLDFINN 755
           GHPRRRRP  SVVL  G ++RI+ADC DFI +
Sbjct: 181 GHPRRRRPTGSVVLDRGTSQRIIADCQDFIKS 212


>AE014134-1782|AAF52876.1|  431|Drosophila melanogaster CG4908-PA,
           isoform A protein.
          Length = 431

 Score =  316 bits (776), Expect = 2e-86
 Identities = 141/212 (66%), Positives = 169/212 (79%)
 Frame = +3

Query: 120 MTIVEYMASLAQNPYXXXXXXXXXXXXXXXILRKGLQTSMVLFRRHCMITLEVPCRDKSY 299
           MT+ + +A L+ NPY               ILRKGLQ  ++LFRRHCMITLEVPCRDKSY
Sbjct: 1   MTLPDLVAGLSSNPYFGAGFGLFGVGAAAAILRKGLQGGVILFRRHCMITLEVPCRDKSY 60

Query: 300 QWLLQWITQKGARKTQHLSVETSFEQKDSGQIRTKYDFIPSVGQHFFRYGGTWIRVDRTR 479
           QWLL+WIT +GARKTQHLSVET+F Q D+G I+T YDFIPS+G+H F+Y G WI+V+RTR
Sbjct: 61  QWLLKWITIRGARKTQHLSVETNFVQNDNGTIKTSYDFIPSIGKHLFQYKGNWIQVERTR 120

Query: 480 EQQTLDLHMGIPWETVTLTSFGRNKQLYYGILEEARTMALKQHEGMTVMYTAMGSEWRPF 659
           EQQTLDLHMG+PWETVTLT+FG NK +Y+ ILEEAR +AL+  EG TV+YTAMG+EWRPF
Sbjct: 121 EQQTLDLHMGVPWETVTLTAFGNNKGIYFDILEEARQLALEATEGKTVLYTAMGAEWRPF 180

Query: 660 GHPRRRRPIHSVVLRSGLTERIVADCLDFINN 755
           GHPRRRRP  SVVL  G ++RI+ADC DFI +
Sbjct: 181 GHPRRRRPTGSVVLDRGTSQRIIADCQDFIKS 212


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,107,315
Number of Sequences: 53049
Number of extensions: 677160
Number of successful extensions: 1315
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1315
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)