Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19n11f
(756 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.3
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 2.3
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 3.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 4.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 4.1
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 4.1
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 21 9.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 9.4
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.4
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 21 9.4
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 21 9.4
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 21 9.4
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.4 bits (48), Expect = 2.3
Identities = 11/23 (47%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
Frame = +3
Query: 672 RRRPIHSVVLRSG---LTERIVA 731
R+RP+H+VV R G +T+R+ A
Sbjct: 358 RKRPMHNVVYRPGENPVTQRLPA 380
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 429 QHFFRYGGTWIRVDRTREQQTLDLHMGI 512
+HFF YGG I + ++ +TL G+
Sbjct: 336 EHFFEYGGNNIEI-IVKDPETLQFPSGM 362
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 23.0 bits (47), Expect = 3.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 588 TMALKQHEGMTVMYTAMGSEWRP 656
T ++ H MT+M+T W+P
Sbjct: 86 TSVMELHSWMTLMWTDSHLSWKP 108
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 672 RRRPIHSVVLRSG 710
R+RP+H+VV R G
Sbjct: 389 RKRPMHNVVYRPG 401
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 672 RRRPIHSVVLRSG 710
R+RP+H+VV R G
Sbjct: 409 RKRPMHNVVYRPG 421
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +3
Query: 672 RRRPIHSVVLRSG 710
R+RP+H+VV R G
Sbjct: 358 RKRPMHNVVYRPG 370
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 21.4 bits (43), Expect = 9.4
Identities = 12/46 (26%), Positives = 25/46 (54%)
Frame = +3
Query: 522 TVTLTSFGRNKQLYYGILEEARTMALKQHEGMTVMYTAMGSEWRPF 659
T S+G L++ ++ + T +L ++ ++V YTA+ + PF
Sbjct: 124 TAAFISYGT---LFFIYVQPSATFSLDLNKVVSVFYTAVIPMFSPF 166
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.4 bits (43), Expect = 9.4
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = -2
Query: 686 YRSAPTRVSKGSPLRAHCGVHNCH 615
Y+ + K + CGVHN H
Sbjct: 312 YKYITPLIQKHLKIHDTCGVHNLH 335
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 265 IIQCLLNNTIEVCNPFRRI 209
II LLNNTI N ++++
Sbjct: 303 IISSLLNNTIHNNNNYKKL 321
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 265 IIQCLLNNTIEVCNPFRRI 209
II LLNNTI N ++++
Sbjct: 314 IISSLLNNTIHNNNNYKKL 332
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 265 IIQCLLNNTIEVCNPFRRI 209
II LLNNTI N ++++
Sbjct: 314 IISSLLNNTIHNNNNYKKL 332
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 265 IIQCLLNNTIEVCNPFRRI 209
II LLNNTI N ++++
Sbjct: 303 IISSLLNNTIHNNNNYKKL 321
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,560
Number of Sequences: 438
Number of extensions: 4484
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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