Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19n10r
         (841 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   1.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   1.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   3.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   8.1  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 387 VINVPPRNSQLPRSA--SIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSR 530
           V+N+   ++ + R++  S+        + V+ +R V+  DGS T  YSS+
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 387 VINVPPRNSQLPRSA--SIAAAEKHTNTRVVPSRAVIMIDGSTTLTYSSR 530
           V+N+   ++ + R++  S+        + V+ +R V+  DGS T  YSS+
Sbjct: 545 VVNLKSGSNTIERNSHESVFVVPDEVPSDVLYNRLVVSEDGSETFKYSSQ 594


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 17  LKYFNQKIKKKTNIF 61
           L++F  KIK+K N+F
Sbjct: 264 LEHFEMKIKRKHNVF 278


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 483 AVIMIDGSTTLTYSSRGPMLMPDVNPNP 566
           A I++    T  Y++  P L   +NPNP
Sbjct: 198 APILVRARETPNYTACPPTLACPLNPNP 225


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 6/16 (37%), Positives = 12/16 (75%)
 Frame = +2

Query: 761 NWWFQSILKAVDKGLK 808
           NW  Q ++K+++KG +
Sbjct: 841 NWSNQDVIKSIEKGYR 856


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,654
Number of Sequences: 438
Number of extensions: 4727
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)