Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19n08f
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...   137   3e-34
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    27   0.83 
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           25   3.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.3  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   7.7  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score =  137 bits (332), Expect = 3e-34
 Identities = 61/125 (48%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
 Frame = +1

Query: 262 ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRY 441
           +S S +N++K+KF++ LDVQQF+P+EI+VK  +N V+VEGKHEEKQD+HG++SR F RRY
Sbjct: 3   DSGSAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRY 62

Query: 442 ILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAG-ERIVPITKTGPAKQPEAASSKPEQQ 618
           +LP G+   D+VS+LSSDG+LT+T P++       ER +PIT TG   +     + PE  
Sbjct: 63  MLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPITHTGQPMKQVTGKAAPENG 122

Query: 619 QPREQ 633
             +++
Sbjct: 123 HSKKE 127


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 14/59 (23%), Positives = 27/59 (45%)
 Frame = +1

Query: 316 VQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSS 492
           ++++ P+E TV  SN   +V+G+   K        +     Y   + Y+ +   S+ SS
Sbjct: 68  IEKYCPEEYTVDPSNTFQLVQGRELTKPSRRVLEGQSERESYYSSSHYQSSSSSSSSSS 126


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = -3

Query: 166 SSDPCRSAGPVVWRGARYAPSHPTNRETSLVLSTS 62
           S+DP R++GP  W     +   P++   +++ ++S
Sbjct: 213 SADPSRNSGPSSWMSGAGSVGGPSSAAAAMLSASS 247



 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 538 AGERIVPITKTGPAKQPEAASSKPEQQQPREQ 633
           AG +  P        QP+    + +QQQP+ Q
Sbjct: 396 AGGQAQPSQSAAQQYQPQQQQQQQQQQQPQSQ 427


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 415 ISRQFTRRYILPTGYEVNDLVST 483
           +S Q T+R   PTG  +N+L+ST
Sbjct: 290 LSTQRTKRDFHPTGCSLNNLLST 312



 Score = 23.4 bits (48), Expect = 7.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 407 TASFPVSSPAGTSCRPDTRSTTWSARCLPT 496
           +A  P SS + +S RP   ST+ S+  +PT
Sbjct: 32  SADVPHSSTSQSSRRPQHSSTSASSSSVPT 61


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 415 ISRQFTRRYILPTGYEVNDLVST 483
           +S Q T+R   PTG  +N+L+ST
Sbjct: 290 LSTQRTKRDFHPTGCSLNNLLST 312



 Score = 23.4 bits (48), Expect = 7.7
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 407 TASFPVSSPAGTSCRPDTRSTTWSARCLPT 496
           +A  P SS + +S RP   ST+ S+  +PT
Sbjct: 32  SADVPHSSTSQSSRRPQHSSTSASSSSVPT 61


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
 Frame = +1

Query: 520 KRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQ--PREQMVPIV 648
           K   PNAG+ +  I  T P       +   +QQQ  PR    P +
Sbjct: 184 KASAPNAGKSLSNIQPTPPKGAGATGTQHSDQQQELPRPSSPPAI 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,020
Number of Sequences: 2352
Number of extensions: 14921
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)