Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19m16r
(900 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 105 1e-23
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 45 2e-05
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 34 0.032
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 33 0.042
SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces pombe... 31 0.22
SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease |Schizosacc... 31 0.22
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 30 0.39
SPBC365.07c |||TATA element modulatory factor homolog |Schizosac... 30 0.39
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 30 0.39
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 30 0.52
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.68
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 0.90
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 29 1.2
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 1.2
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 29 1.2
SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyce... 28 1.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 28 1.6
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 28 1.6
SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyc... 28 1.6
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 2.1
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 3.6
SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr 2|||M... 27 3.6
SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomy... 27 3.6
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 3.6
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 27 3.6
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 27 3.6
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 27 4.8
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 27 4.8
SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subuni... 27 4.8
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha... 27 4.8
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 26 6.3
SPAC607.02c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.3
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 26 6.3
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 26 8.4
SPBC1604.10 |srb7|med21|mediator complex subunit Srb7 |Schizosac... 26 8.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 26 8.4
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 105 bits (251), Expect = 1e-23
Identities = 63/238 (26%), Positives = 123/238 (51%), Gaps = 2/238 (0%)
Frame = -3
Query: 847 DQTKKKDLAAEISRLESELEIRH-NKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRR 671
++T+++DL + + + +I K +++ L+++ N ++R ++ + R
Sbjct: 91 NETQQEDLLNTLLQQMEDTKITTAEKSSVQSSLNTKENTPQQPKKSR------NRQKERL 144
Query: 670 DKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDCLYKAVSH 491
+++ + K E+ +L+ E + +N E + +K LEE L +P+DG+CL+ ++SH
Sbjct: 145 ERRKAEMKKMSEQAELES-EKMADLKNEEKKKFSKILEEAGLVAVDIPADGNCLFASISH 203
Query: 490 QLQLVKQETVSVDELREKVSNYIRDNKDDFKPFMCNPXXXXXXXXXXXXDYCHKIMNTKD 311
QL ++ LR K ++Y+ + + F+ F+ + DYC++I N
Sbjct: 204 QLNYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLD---EESGEVLPVSDYCNEIRNNSK 260
Query: 310 WGGQLELRALSNILKCPINVIQAVGPDC-IEQGTEFEGPPLIITYHRHMYSLGEHYNS 140
WG +E++AL+N L+ P++V GP T PL I Y++H++ LG HYNS
Sbjct: 261 WGSDIEIQALANSLEVPVHVYNTEGPVLKFNPSTVKFEKPLCIAYYQHLFGLGAHYNS 318
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 44.8 bits (101), Expect = 2e-05
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Frame = -3
Query: 850 NDQTKKKDLAAEISRLES-----ELEIRHNKEIMEAKLSSEH-NLEPMVDETRVIKTKVS 689
ND T KK L IS LE E E ++++ E K+SS LE + E +++ K+
Sbjct: 346 NDLTVKK-LKRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLRNKLL 404
Query: 688 KAQRRRDKKSEQ-EKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDC 512
K + + SE+ E++ + +QDKE +G +E+Q ++LE +N ++ +
Sbjct: 405 KEEHKHHSTSEKLEELSKYVASIQDKERNNGQNALELQARIQQLERRNEDMYNKLLAEEI 464
Query: 511 LYKAVSHQLQLVK 473
+ + + + +Q +K
Sbjct: 465 IRRKLHNDIQELK 477
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 33.9 bits (74), Expect = 0.032
Identities = 30/139 (21%), Positives = 73/139 (52%), Gaps = 2/139 (1%)
Frame = -3
Query: 844 QTKKKDLAAEISRLESELEIRHNKEIMEA--KLSSEHNLEPMVDETRVIKTKVSKAQRRR 671
+TK K+LAA +L+ EL + HN+++ E+ ++SS LE + E R+ +++ K + +
Sbjct: 196 ETKCKELAAAEQQLQ-ELSV-HNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAAQ 253
Query: 670 DKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDCLYKAVSH 491
+++ E+ +++ +E +N ++++ R EE K+ T+ + + + ++
Sbjct: 254 EERIEKLSSNNRNVEILKEE-----KN-DLESKLYRFEEYRDKVATLELENEKIQTELNS 307
Query: 490 QLQLVKQETVSVDELREKV 434
L+ E + + + K+
Sbjct: 308 WKSLITNELPTPEAVSNKL 326
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 33.5 bits (73), Expect = 0.042
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Frame = -3
Query: 688 KAQRRRDKKSEQEKIREEEIKLQDKENVH----GARNIEIQTITKRLEEKNLKIFTVPSD 521
K ++ + S+ E ++ EE KLQ+K N H N + T+ K +EK + I +
Sbjct: 632 KEEQLNAQLSQLENLQNEERKLQEKVNEHESLLSRTNDILSTLRKERDEKLIPI----HE 687
Query: 520 GDCLYKAVSHQLQLVKQETVSVDELREKVSNYIRDNKDDFKPFM 389
L + + HQ L++Q ++ ++ K++F+ M
Sbjct: 688 WQQLQERIEHQTLLLRQREKVPEQFAAEIEKNEDIRKENFEALM 731
>SPBC3E7.09 |||Sad1-UNC-like C-terminal|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 659
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Frame = -3
Query: 544 KIFTVPSDGDCLYKAVSHQLQLVKQETVSVDELREKV-SNYIRDN 413
+I T PS+ + +YK ++ +L +++ + DE+ EK+ +NY + N
Sbjct: 446 QISTFPSNQESIYKNINKRLSTLEERKKAFDEIVEKILTNYGKHN 490
>SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 31.1 bits (67), Expect = 0.22
Identities = 25/92 (27%), Positives = 39/92 (42%)
Frame = -3
Query: 550 NLKIFTVPSDGDCLYKAVSHQLQLVKQETVSVDELREKVSNYIRDNKDDFKPFMCNPXXX 371
++ + +P D CL++A+S L S ELRE V+N + N D + +
Sbjct: 134 DIALRVMPDDNSCLFRALSKPLGF------SPYELREIVANQVLSNPDIYSTAILG---- 183
Query: 370 XXXXXXXXXDYCHKIMNTKDWGGQLELRALSN 275
+Y I WGG +EL LS+
Sbjct: 184 -----KPSIEYASWIRKETSWGGYIELSILSS 210
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 0.39
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = -3
Query: 817 EISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIRE 638
E + E ++ +E + +L + E + R K K + + R+K + ++++RE
Sbjct: 636 EARKKREEQRLKREQEKKQQELERQKREEKQKQKEREKKLKKQQQEADREKMAREQRLRE 695
Query: 637 EEIK 626
EE K
Sbjct: 696 EEEK 699
Score = 29.5 bits (63), Expect = 0.68
Identities = 16/53 (30%), Positives = 31/53 (58%)
Frame = -3
Query: 763 EAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENV 605
+AKL E E + R +K K+ + +++RDKK + + +EEE + ++ E +
Sbjct: 569 QAKLLEEIEEENKRKQERELK-KIREKEKKRDKKKQLKLAKEEERQRREAERL 620
Score = 26.6 bits (56), Expect = 4.8
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Frame = -3
Query: 847 DQTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKA--QRR 674
+Q KK+ R E + + K++ K E + E M E R+ + + + +R+
Sbjct: 649 EQEKKQQELERQKREEKQKQKEREKKLK--KQQQEADREKMAREQRLREEEEKRILEERK 706
Query: 673 RDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDCLYKAVS 494
R +K ++E+ +L +KE+ R + I K SDG C S
Sbjct: 707 RREKLDKEEEERRRRELLEKESEEKERRLREAKIAAFFAPNQTK---EGSDG-C---TTS 759
Query: 493 HQLQLVKQETVSVDELREKVSNYIRDN 413
QL L +++ V++ +K+S+++ D+
Sbjct: 760 SQLGLFEKKGDLVND-EDKLSSHLLDS 785
>SPBC365.07c |||TATA element modulatory factor homolog
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 30.3 bits (65), Expect = 0.39
Identities = 20/92 (21%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Frame = -3
Query: 802 ESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIK- 626
E E + + +++ E SEH + E + +VS+ ++ D + + ++EEI+
Sbjct: 163 EDEKKKKEIQDLKELYEKSEHGAKNWERERETFQNQVSQMSKQLDSLEKLCERKDEEIRS 222
Query: 625 -------LQDKENVHGARNIEIQTITKRLEEK 551
L+++ + A+N+++QT RL+ +
Sbjct: 223 SQAFNMTLREENDTLAAQNLDLQTQLDRLQRE 254
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -3
Query: 844 QTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDK 665
+ +K IS LE E E K ME + + + + T+ S + + +
Sbjct: 105 ELQKSQFEKRISILEKEKEDLQRK--MEELTVESMEVVRLTRQVETLSTQYSIQRSQWVR 162
Query: 664 KSEQEKIREEEIKLQDKENVHGARNIE 584
+ E++K +++K +++ HGA+N E
Sbjct: 163 EDEKKKKEIQDLKELYEKSEHGAKNWE 189
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 30.3 bits (65), Expect = 0.39
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 3/138 (2%)
Frame = -3
Query: 793 LEIRHNKEIMEAKLSSEHNLEPM--VDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQ 620
L + + +LS + +L VD +IK + + E+ K++ + L+
Sbjct: 131 LNLLQQLRYLRLQLSEKEDLHKKLSVDNAHLIKQLDLLSSNMKTLMKEKTKVQGQRDLLE 190
Query: 619 DKENVHGARNIEIQTITKRL-EEKNLKIFTVPSDGDCLYKAVSHQLQLVKQETVSVDELR 443
+ + E++++T L +EKN + + CL H+LQL ++ ++DE
Sbjct: 191 QRLQGLMKKLTEVESLTVSLNDEKNKLTLELTNLRICL-----HELQLNAEKGETIDESE 245
Query: 442 EKVSNYIRDNKDDFKPFM 389
+ + + ++++D F+
Sbjct: 246 DSKNTLVTEDENDDSVFL 263
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 29.9 bits (64), Expect = 0.52
Identities = 28/91 (30%), Positives = 46/91 (50%)
Frame = -3
Query: 823 AAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKI 644
A EI+RL S+LE K+ E + +E KTK + + + ++KS++ K
Sbjct: 1567 ADEIARLRSQLE--STKQYYEKEKETEILAARSELVAEKEKTK-EELENQLNEKSQRIKE 1623
Query: 643 REEEIKLQDKENVHGARNIEIQTITKRLEEK 551
EE+ + EN H NI+ I +++EEK
Sbjct: 1624 LEEQAQKNSSENTHD--NID-DMIKQQVEEK 1651
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.5 bits (63), Expect = 0.68
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Frame = -3
Query: 700 TKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEE----KNLKIFT 533
T +S + ++D K + EK+ E+E +++ KE LEE +N ++ T
Sbjct: 379 TSISVDEPQKDSKDDSEKV-EKETEVERKEENEAEAEAVFDDWEAALEEPEVAENNEVVT 437
Query: 532 VPSDGDCLYKAVSHQLQ-LVKQETVSVDELREKVSNYIRDNKDDFKPFMC 386
+ D AV H ++ +T VD++ + ++ D + +C
Sbjct: 438 EKKETDIKSDAVEHSIKDKEDSKTDKVDDIPQAAPAESNVSESDLRSPIC 487
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 29.1 bits (62), Expect = 0.90
Identities = 16/73 (21%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = -3
Query: 760 AKLSSEHNL-----EPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGA 596
A L + HN P T+ ++ + ++++RR + EQ + + E+K++ ++ G
Sbjct: 606 AALYTNHNFALDPTNPHFKRTKTVEKIMDESRKRRSNQLEQTQDGKPELKIKKRKAEKGD 665
Query: 595 RNIEIQTITKRLE 557
+ E+ I K ++
Sbjct: 666 QRQELDRIVKSIK 678
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = -3
Query: 703 KTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKN 548
KT+ +K + + KK+ +EKI + + + K +VH + ++K LE +N
Sbjct: 91 KTEKAKVKPKAKKKNSKEKISKSSKQDEHKTDVH---KESVSKLSKNLESRN 139
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 28.7 bits (61), Expect = 1.2
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Frame = -3
Query: 790 EIRHNKEIMEAKLSSEHNLEPMVDETRVIKT----KVSKAQRRRDK-----KSEQEKIRE 638
E++ KE++ + E +V + R K K R ++ K E EK+ +
Sbjct: 547 ELQDTKEVLSKSSKESDDYEEVVGKLRTEAEREIEKFEKTIRENEESISLFKEEVEKLTD 606
Query: 637 EEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDCLYKAVSHQLQLVKQETVS 458
E +L ++ N E+Q + LEE+N K + D K S+ L+ +K
Sbjct: 607 EITQLSERYNDKCHEFDELQKRLQTLEEENNK-----AKEDSTSK-TSNLLEQLKMTEAE 660
Query: 457 VDELREK 437
VD LR++
Sbjct: 661 VDSLRKE 667
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Frame = -3
Query: 688 KAQRRRDKKSEQEKIREEE----IKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPS- 524
K ++ R ++ +++K+RE+E K+++ E + R I +Q +R EE++ K+
Sbjct: 99 KREKERQQREQEKKLREQEKIAAKKMKELEKLEKER-IRLQEQQRRKEERDQKLREKEEA 157
Query: 523 ---DGDCLYKAVSHQLQLVKQETVSVDELREKVSNYIRDNKDDFKPF 392
+ + QL+L T V++ N++ D D+ F
Sbjct: 158 QRLRQEQILNKERQQLKLNNFFTKGVEKRIAPNENFVADKTDELNEF 204
>SPCC11E10.03 |mug1||dynactin complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 351
Score = 28.3 bits (60), Expect = 1.6
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Frame = -3
Query: 850 NDQTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDE--TRVIKTKVSKAQR 677
+DQT+KK ++ ++ SELE + +M + L M+D + I ++ SK++
Sbjct: 50 SDQTEKKCWKEKLMKIRSELEELWEQSMMYEEQKELTQLGEMLDRLWDKHINSEGSKSET 109
Query: 676 RRDKK-SEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDCLYKA 500
D S + E+ ++ + + E +K E + P D D L K
Sbjct: 110 ISDTAISGNDDTMEKRLEQFSDDTLQDTLETEKNLNSKTSESLKSPTLSYPFDLDSLDKR 169
Query: 499 V 497
+
Sbjct: 170 I 170
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = -3
Query: 787 IRHNKEIMEAKLSSEHN-LEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKE 611
+R+ E ++ L +++ + + E + ++ S+ Q + SEQ I +++I+ E
Sbjct: 96 LRNENESLKTNLENQNKRFDALTTENQSLRRANSELQEQSKIASEQLSIAKDQIEALQNE 155
Query: 610 NVHGARNIEI--QTITKRLEEKNLKIFTVPS 524
N H ++ Q ++ E K +F S
Sbjct: 156 NSHLGEQVQSAHQALSDIEERKKQHMFASSS 186
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = -3
Query: 703 KTKVSKAQRRRDKKSEQEKIREEEIKLQDK 614
K K S +++R+ S++E+ ++++IKL+DK
Sbjct: 206 KDKESSSKKRKSGSSDKEEKKKKKIKLKDK 235
>SPCC1020.12c ||SPCC14G10.06|xap-5-like protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 288
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 721 DETRVIKTKVSKAQRRRDKKSEQEKIREEEI 629
D R I+ +A+ R+ EQE+IRE+EI
Sbjct: 109 DAEREIRENAKRAEYRKQWLKEQEQIREKEI 139
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/85 (20%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Frame = -3
Query: 787 IRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVS---KAQRRRDKKSEQEKIREEEIKLQD 617
+ ++++E+KL + LE + R++ + + ++ R ++++ ++EK + ++
Sbjct: 433 LEEERDVLESKLQT---LEDDNNSLRLMTSSLGNQIESLRTQNREIDEEKNHLRLLASKN 489
Query: 616 KENVHGARNIEIQTITKRLEEKNLK 542
+ NI +Q +TK LE +K
Sbjct: 490 SDKALAETNIRLQEVTKELETLRMK 514
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 27.1 bits (57), Expect = 3.6
Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Frame = -3
Query: 847 DQTKKKDLAAE--ISRLES-ELEIRHNKEIME--AKLSSEHNLEPMVDETRVIKTKVSKA 683
D+ + KDL + +LE +L ++ ++E ++ +K + EH E + ++ V+ +
Sbjct: 472 DRVQNKDLLCQEQARKLEVLDLNVKSSREQLQYVSKSNQEHKKEVEALQLQL----VNSS 527
Query: 682 QRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEE 554
KSE EK++ E + +K + +I T+ L +
Sbjct: 528 TELESVKSENEKLKNELVLEIEKRKKYETNEAKITTVATDLSQ 570
>SPBC887.12 |||P-type ATPase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1258
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 8 WSFLPNFIKNELLFSLFLNYAHLFFIFKVI 97
++FLP F+K + F YA+LFF+F +
Sbjct: 170 FTFLPKFLKEQ-----FSKYANLFFLFTAV 194
>SPAC1F7.02c |||ATP-dependent RNA helicase Has1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/43 (25%), Positives = 26/43 (60%)
Frame = -3
Query: 676 RRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKN 548
+ DKK +E ++E+ Q++EN +N +++ ++ L+ +N
Sbjct: 27 KNDKKIAEELPQDEDDYEQEEENEDADQNTSVESESEELDNEN 69
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.1 bits (57), Expect = 3.6
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -3
Query: 772 EIMEAKLSS-EHNLEPMVDETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGA 596
E +E ++S NL+ + R +K + K++++ + S+ E + EEI KE H A
Sbjct: 545 EELEQQISKLTDNLQEYRNTVRELKLDLEKSKKKNEDLSKLEVEKVEEIANLKKELTHLA 604
Query: 595 RNIE 584
+ E
Sbjct: 605 KQQE 608
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 27.1 bits (57), Expect = 3.6
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = -3
Query: 706 IKTKVSKAQRRRDKKSEQEKIREE--------EIKLQDKENVHGARNIEIQTITKRLEEK 551
++T + R D +S EK+R E+KLQ KE RN+E + K+ ++
Sbjct: 71 VETSRIEVHRALDYRSANEKLRPYSKYASKNIELKLQKKEKEEELRNLE-EEKAKKKKDA 129
Query: 550 NLK 542
NLK
Sbjct: 130 NLK 132
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 27.1 bits (57), Expect = 3.6
Identities = 24/84 (28%), Positives = 43/84 (51%)
Frame = -3
Query: 850 NDQTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRR 671
N+ KK+D E + E+E E N+E E + E + E DE+ + K ++ RR
Sbjct: 89 NNNDKKED---EDNVEENEEEADANEEEEEDEEDDEEDEEDE-DESGGGRRKRARHDRRN 144
Query: 670 DKKSEQEKIREEEIKLQDKENVHG 599
+ ++ E+E +L+D+E+ G
Sbjct: 145 QFLDIEAEVDEDEEELEDEEDEIG 168
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.6 bits (56), Expect = 4.8
Identities = 21/86 (24%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = -3
Query: 844 QTKKKDLAAEISRLESELEIRHNKEIMEA-KLSSEHNLEPMVDETRVIKTKVSKAQRRRD 668
+TK ++ +E SR+E+ELE + EA ++ + E + E RV + K
Sbjct: 94 ETKCRNAESEKSRVENELEDLTSSLFEEANRMVANARKETVASEKRVNQLKKQLVDAETL 153
Query: 667 KKSEQEKIREEEIKLQDKENVHGARN 590
S Q ++ E + + + H N
Sbjct: 154 LSSTQHQLTELKDVMHSMSDSHEQNN 179
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 26.6 bits (56), Expect = 4.8
Identities = 20/103 (19%), Positives = 47/103 (45%)
Frame = -3
Query: 847 DQTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRRD 668
D T + ++A+I++ L+ +K + + + +E + D+ R+ K+ K R+
Sbjct: 849 DHTNYETVSADINQ---NLKETLDKLLNGSSDFKNNEIELLHDQIRITNAKLEK----RE 901
Query: 667 KKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKI 539
K K E+ ++ + +E N+E + E N+++
Sbjct: 902 KLINASKYIEDTLRSEIQEAAEKVSNLEFSNFNLKEENSNMQL 944
>SPBC776.18c |pmh1|mcr1|transcription factor TFIIH complex subunit
Pmh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 318
Score = 26.6 bits (56), Expect = 4.8
Identities = 18/81 (22%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = -3
Query: 646 IREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIF-TVPSDGDCLYKAVSHQLQLVKQ 470
+R+ + + Q E+ R ++++ R+ K + F ++ + D L + L+ +
Sbjct: 63 LRKAKFREQTFEDAQIEREVDVRKRISRIFNKGQQEFDSLQAYNDYLEEVEILTFNLIYK 122
Query: 469 ETVSVDELREKVSNYIRDNKD 407
+ V+E EKV Y + N+D
Sbjct: 123 --IDVEETEEKVKQYEKQNRD 141
>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 26.6 bits (56), Expect = 4.8
Identities = 20/88 (22%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = -3
Query: 664 KSEQEKIREEEIKLQDKEN----VHGARNIEIQTITKRLEEKNLKIFTVPSDGDCLYKAV 497
K Q K+R +++ L E+ V G + + + E+N + S+G
Sbjct: 134 KEVQRKLRTKQLDLSKAESIISAVLGEEKPDPSSKVSNIPEENRDATSAISEGKETESVS 193
Query: 496 SHQLQLVKQETVSVDELREKVSNYIRDN 413
+ ++K +TVSV+ +++S+ R N
Sbjct: 194 LEETGVLKNQTVSVNVDLKEISSQARSN 221
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.2 bits (55), Expect = 6.3
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Frame = -3
Query: 703 KTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPS 524
K ++SK + R SE EK + E+ + ++ L++ NLK S
Sbjct: 505 KGRLSKEEIDR-MVSEAEKYKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDAS 563
Query: 523 DGDCLYKAVSHQLQLVKQETVSV-DELREK 437
D + + KAV ++ + T + DE +K
Sbjct: 564 DKEAIDKAVKETIEWLDHNTTAAKDEYEDK 593
>SPAC607.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 231
Score = 26.2 bits (55), Expect = 6.3
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Frame = -3
Query: 850 NDQTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVSKAQRRR 671
N + KKK +I RL E ++ + +A S + +DE K K A+R+
Sbjct: 59 NLKNKKKKDYGKIQRLPGERLSEFSQRVNKAIPVSFKSGPSKIDEFTDKKEKKKIAKRKE 118
Query: 670 DKKSEQEKIREE-EIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDCLYKAVS 494
++ + +I E E K + + IE + K + + T PS G+ + +A
Sbjct: 119 KRERDWNEIEENFEDKTWEADTTGQFIQIESRKKRKNSPDPWANLQTKPSFGETV-QAPP 177
Query: 493 HQLQLVKQETVSVDELREKVSN 428
+L +ET ++ + KV+N
Sbjct: 178 ELPELKIKETKYLENV-PKVNN 198
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 26.2 bits (55), Expect = 6.3
Identities = 21/101 (20%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Frame = -3
Query: 718 ETRVIKTKVSKAQRRRDKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKI 539
ET++ + S + + S QEKI E ++ + + N + Q + E N+K
Sbjct: 565 ETQIKSLESSLTNSQAECVSFQEKINELNSQIDELKLKLNEANKKYQELAISFENSNVKT 624
Query: 538 FTVPSDGDCLYKAVSHQ----LQLVKQETVSVDELREKVSN 428
+V D +A+ ++ L+ ++ T + L++ N
Sbjct: 625 QSVEPDNGLSLEALKNENQTLLKNLEDSTARYEHLQKSFKN 665
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/86 (19%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -3
Query: 850 NDQTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDETRVIKTKVS--KAQR 677
+D + +E+S + E + + + S DET+ + ++ K +R
Sbjct: 122 DDSVDSSNKNSEVSIKRRKTESNSQESVDSSNSESSDEESDSEDETQQLLRELENIKQER 181
Query: 676 RRDKKSEQEKIREEEIKLQDKENVHG 599
+R++ ++EK R E + +++E G
Sbjct: 182 KREQMLQEEKNRALEQEKREREIAFG 207
>SPBC1604.10 |srb7|med21|mediator complex subunit Srb7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 138
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/83 (22%), Positives = 42/83 (50%)
Frame = -3
Query: 655 QEKIREEEIKLQDKENVHGARNIEIQTITKRLEEKNLKIFTVPSDGDCLYKAVSHQLQLV 476
QEK+ + ++ E + A+ + + K L K ++I T+ + + A HQL+ +
Sbjct: 38 QEKVSDSKVNPISAEELQFAQ----RDLAKDLVTKFMQIDTLINQLPGISTAPKHQLEKI 93
Query: 475 KQETVSVDELREKVSNYIRDNKD 407
K+ S++E + + + +N+D
Sbjct: 94 KKLQNSIEEKQLERKSLESENED 116
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 25.8 bits (54), Expect = 8.4
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 2/100 (2%)
Frame = -3
Query: 844 QTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDET--RVIKTKVSKAQRRR 671
+ K K A E ++ E+E + + E AK +E + +E R + K + +
Sbjct: 574 EEKAKREAEEKAKREAEEKAKREAE-ENAKREAEEKAKREAEEKAKREAEEKAKREAEEK 632
Query: 670 DKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEK 551
K+ +EK + E + +E A+ + + EEK
Sbjct: 633 AKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEK 672
Score = 25.8 bits (54), Expect = 8.4
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = -3
Query: 844 QTKKKDLAAEISRLESELEIRHNKEIMEAKLSSEHNLEPMVDET--RVIKTKVSKAQRRR 671
+ K K A E ++ E+E + + E +AK +E + +E R + K + +
Sbjct: 590 EEKAKREAEENAKREAEEKAKREAE-EKAKREAEEKAKREAEEKAKREAEEKAKREAEEK 648
Query: 670 DKKSEQEKIREEEIKLQDKENVHGARNIEIQTITKRLEEK 551
K+ +EK + E + +E A+ + + EEK
Sbjct: 649 AKREAEEKAKREAEENAKREAEEKAKREAEENAKREAEEK 688
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,246,569
Number of Sequences: 5004
Number of extensions: 62857
Number of successful extensions: 275
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 270
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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