Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19m15f
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...   295   2e-80
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...   295   2e-80
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...   290   8e-79
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...   242   2e-64
Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical pr...    48   5e-06
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    42   3e-04
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    42   5e-04
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    36   0.023
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    36   0.030
Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical pr...    31   0.64 
AL117207-8|CAB60399.1|  362|Caenorhabditis elegans Hypothetical ...    29   4.5  
Z83119-4|CAE17866.1|  226|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score =  295 bits (724), Expect = 2e-80
 Identities = 138/234 (58%), Positives = 159/234 (67%)
 Frame = +3

Query: 36  STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 215
           ST G+VI C AAVAW A  PLSIE I+V PPKA EVRVKI  T VCHTDAYTL G DPEG
Sbjct: 3   STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62

Query: 216 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 395
           +FPVVL               T   PGDHVVPLYVPQC  C++C NPKTNLCQK+R +QG
Sbjct: 63  LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122

Query: 396 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 575
            G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV   APL+KV LLGCG+ TG
Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTG 182

Query: 576 YGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVDINPDKFEVAK 737
           YGA LNT KVE GS  A++                   +I+G+D+   KFE AK
Sbjct: 183 YGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAK 236


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score =  295 bits (724), Expect = 2e-80
 Identities = 138/234 (58%), Positives = 159/234 (67%)
 Frame = +3

Query: 36  STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEG 215
           ST G+VI C AAVAW A  PLSIE I+V PPKA EVRVKI  T VCHTDAYTL G DPEG
Sbjct: 3   STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEG 62

Query: 216 VFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRSTQG 395
           +FPVVL               T   PGDHVVPLYVPQC  C++C NPKTNLCQK+R +QG
Sbjct: 63  LFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQG 122

Query: 396 QGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTG 575
            G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV   APL+KV LLGCG+ TG
Sbjct: 123 NGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTG 182

Query: 576 YGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVDINPDKFEVAK 737
           YGA LNT KVE GS  A++                   +I+G+D+   KFE AK
Sbjct: 183 YGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAK 236


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score =  290 bits (711), Expect = 8e-79
 Identities = 138/236 (58%), Positives = 159/236 (67%), Gaps = 2/236 (0%)
 Frame = +3

Query: 36  STVGKVIKCLAAVAWEAGKPLSIEEIEVDPPKAGEVRVK--ITATGVCHTDAYTLSGKDP 209
           ST G+VI C AAVAW A  PLSIE I+V PPKA EVRVK  I  T VCHTDAYTL G DP
Sbjct: 3   STAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKFQILYTAVCHTDAYTLDGHDP 62

Query: 210 EGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVRST 389
           EG+FPVVL               T   PGDHVVPLYVPQC  C++C NPKTNLCQK+R +
Sbjct: 63  EGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRIS 122

Query: 390 QGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVP 569
           QG G MPDG+ RF C G++L+HFMGCSTFS+YTVV +ISLCKV   APL+KV LLGCG+ 
Sbjct: 123 QGNGFMPDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGIS 182

Query: 570 TGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNRIIGVDINPDKFEVAK 737
           TGYGA LNT KVE GS  A++                   +I+G+D+   KFE AK
Sbjct: 183 TGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKKIVGIDLIESKFESAK 238


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score =  242 bits (592), Expect = 2e-64
 Identities = 110/195 (56%), Positives = 129/195 (66%)
 Frame = +3

Query: 153 ITATGVCHTDAYTLSGKDPEGVFPVVLXXXXXXXXXXXXXXXTSVKPGDHVVPLYVPQCN 332
           I  T VCHTDAYTL G DPEG+FPVVL               T   PGDHVVPLYVPQC 
Sbjct: 215 ILYTSVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCK 274

Query: 333 TCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLC 512
            C++C NPKTN+CQK+R +QG G MPDGT RF C G++L+HFMGCSTFS+YTVV +ISLC
Sbjct: 275 ECEYCKNPKTNMCQKIRVSQGDGFMPDGTSRFTCNGKQLFHFMGCSTFSEYTVVADISLC 334

Query: 513 KVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPGSNCAIFXXXXXXXXXXXXXXXXXXNR 692
           KV   APL+KV LLGCG+ TGYGA LNT KVE GS  A++                   +
Sbjct: 335 KVNPQAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLAVIMGAKAAGAKK 394

Query: 693 IIGVDINPDKFEVAK 737
           I+G+D+   KFE AK
Sbjct: 395 IVGIDLIESKFEKAK 409


>Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical
           protein K12G11.4 protein.
          Length = 351

 Score = 48.4 bits (110), Expect = 5e-06
 Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 2/178 (1%)
 Frame = +3

Query: 87  GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFPVVLXXXXXXXXXX 263
           G PL + ++ V  P+  E+ VKI  +G+CH+D +T  G  +   + P++           
Sbjct: 19  GGPLEVRQVSVPQPQENELLVKIEYSGICHSDLHTWEGDFEYASICPLIGGHEGAGTVVT 78

Query: 264 XXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQGVMPDGTRRFRCKG 440
                     GD   + L    C  C++C      LC  +   Q  G+   G        
Sbjct: 79  IGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLCDHI---QNYGIDRHG-------- 127

Query: 441 QELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYGAALNTAKVEPG 614
                     TF +Y  + +I   KV+    L     + CG  T Y  +L    V+PG
Sbjct: 128 ----------TFQEYLTIRDIDAIKVSNDTNLAAAAPVLCGGVTAY-KSLKATNVKPG 174


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 42.3 bits (95), Expect = 3e-04
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 3/101 (2%)
 Frame = +3

Query: 93  PLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSG--KDPEGVFPVVLXXXXXXXXXXX 266
           PL + ++ V  P   E+ VKI  +G+CH+D +   G  KD   V P+V            
Sbjct: 20  PLEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKD-MSVCPLVGGHEGAGSVVQI 78

Query: 267 XXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRS 386
               T  + GD   V L    C  C+FC      LC  +++
Sbjct: 79  GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLCHHIQN 119


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 41.9 bits (94), Expect = 5e-04
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 3/196 (1%)
 Frame = +3

Query: 51  VIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGK-DPEGVFP 224
           V K   A+ +E+ G PL I+++ +  P   E+ VK+  +G+CH+D +T  G        P
Sbjct: 6   VPKTQRALIFESYGGPLEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLGDFHYVSKCP 65

Query: 225 VVLXXXXXXXXXXXXXXXTSVKPGDHV-VPLYVPQCNTCKFCLNPKTNLCQKVRSTQGQG 401
           ++                 + + GD V + L    C  C++C      LC  V +     
Sbjct: 66  MIGGHEGAGSVISVGSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCPHVWNI---- 121

Query: 402 VMPDGTRRFRCKGQELYHFMGCSTFSQYTVVLEISLCKVAEAAPLDKVCLLGCGVPTGYG 581
               G +++              TF +Y  + ++   K+ ++  +     + CG  T Y 
Sbjct: 122 ----GVQKY-------------GTFQEYATIRDVDAIKIPKSMNMAAAAPVLCGGVTAY- 163

Query: 582 AALNTAKVEPGSNCAI 629
            AL  ++V+ G   A+
Sbjct: 164 KALKESEVKSGQIVAV 179


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 36.3 bits (80), Expect = 0.023
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
 Frame = +3

Query: 96  LSIEEIEVDPPKAGEVRVKITATGVCHTDA--YTLSGKDPEGV-FPVVLXXXXXXXXXXX 266
           L +E++ +  P   +V VK+   G+C +D   +T     P  V  P+++           
Sbjct: 16  LRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEV 75

Query: 267 XXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 383
                 +K GD +       C  C+ C   + NLC ++R
Sbjct: 76  GNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMR 114


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
 Frame = +3

Query: 96  LSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLSGKDPEGVF----PVVLXXXXXXXXXX 263
           L +E+  +  P   +V VKI   G+C +D + L+     G F    P+VL          
Sbjct: 16  LRLEQAPISKPGPRQVLVKINTVGICGSDVHFLT-HGAIGSFVVKEPMVLGHESSGVVSE 74

Query: 264 XXXXXTSVKPGDHVVPLYVPQCNTCKFCLNPKTNLCQKVR 383
                   K GD +       C  C+ C   + NLC  +R
Sbjct: 75  IGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMR 114


>Z78419-6|CAB01704.1|  487|Caenorhabditis elegans Hypothetical
           protein F26A3.6 protein.
          Length = 487

 Score = 31.5 bits (68), Expect = 0.64
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = +3

Query: 63  LAAVAWEAGKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAY 188
           L A+ + +  PL  E I  DP    +  +++T T VC  DAY
Sbjct: 284 LVAMRYCSCHPLMAELIHYDPSSYRDFLLRVTQTSVCSVDAY 325


>AL117207-8|CAB60399.1|  362|Caenorhabditis elegans Hypothetical
           protein Y60A3A.14 protein.
          Length = 362

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 452 VEFLSFTAESPSAIWHHTLTL 390
           V+   F+AE+ +  WHHT++L
Sbjct: 157 VQIFRFSAENSTGFWHHTISL 177


>Z83119-4|CAE17866.1|  226|Caenorhabditis elegans Hypothetical
           protein R05H10.7 protein.
          Length = 226

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
 Frame = +3

Query: 21  SSAVMSTVGKVIKCLAAVAWEA-GKPLSIEEIEVDPPKAGEVRVKITATGVCHTDAYTLS 197
           S+ V +  G+++ CL   AW+     +   + EVD      +   I     CH D + L+
Sbjct: 60  STVVTTQSGEIVACLVNSAWKRDDNAVEGADYEVDEGLTENMTAFIKMLNTCHEDFWNLA 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,312,068
Number of Sequences: 27780
Number of extensions: 340842
Number of successful extensions: 853
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 846
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)