Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19l08r
(389 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 140 2e-33
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 135 4e-32
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 135 4e-32
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 135 4e-32
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 135 4e-32
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 135 4e-32
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 135 4e-32
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 60 3e-09
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 33 0.25
BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein. 33 0.25
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 33 0.25
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 33 0.25
BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase... 29 4.0
BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase... 29 4.0
BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein. 29 4.0
BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein. 29 4.0
BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein. 29 4.0
BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein. 29 4.0
AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase... 29 4.0
AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase... 29 4.0
AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein pr... 29 4.0
AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens ... 29 4.0
AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens ... 29 4.0
AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens ... 29 4.0
AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein. 29 4.0
AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein pr... 29 4.0
AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1 pr... 29 4.0
Z99572-8|CAI23064.1| 753|Homo sapiens selectin P (granule membr... 28 9.3
Z99572-7|CAI23063.1| 829|Homo sapiens selectin P (granule membr... 28 9.3
Z99572-6|CAI23062.1| 645|Homo sapiens selectin P (granule membr... 28 9.3
Z99572-5|CAI23058.1| 830|Homo sapiens selectin P (granule membr... 28 9.3
Z99572-4|CAI23060.1| 646|Homo sapiens selectin P (granule membr... 28 9.3
Z99572-3|CAI23057.1| 768|Homo sapiens selectin P (granule membr... 28 9.3
Z99572-1|CAI23061.1| 768|Homo sapiens selectin P (granule membr... 28 9.3
M60234-1|AAA35910.1| 830|Homo sapiens granule membrane protein-... 28 9.3
M25322-1|AAA35911.1| 830|Homo sapiens protein ( Human granule m... 28 9.3
BC068533-1|AAH68533.1| 829|Homo sapiens selectin P (granule mem... 28 9.3
BC028067-1|AAH28067.2| 789|Homo sapiens SELP protein protein. 28 9.3
AL022146-8|CAI22758.1| 753|Homo sapiens selectin P (granule mem... 28 9.3
AL022146-7|CAI22757.1| 829|Homo sapiens selectin P (granule mem... 28 9.3
AL022146-6|CAI22756.1| 645|Homo sapiens selectin P (granule mem... 28 9.3
AL022146-5|CAI22753.1| 830|Homo sapiens selectin P (granule mem... 28 9.3
AL022146-4|CAI22755.1| 646|Homo sapiens selectin P (granule mem... 28 9.3
AL022146-3|CAI22752.1| 768|Homo sapiens selectin P (granule mem... 28 9.3
AL022146-1|CAI22751.1| 768|Homo sapiens selectin P (granule mem... 28 9.3
AF542391-1|AAN06828.1| 830|Homo sapiens selectin P (granule mem... 28 9.3
AF424541-1|AAP97294.1| 148|Homo sapiens unknown protein. 28 9.3
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 140 bits (338), Expect = 2e-33
Identities = 71/110 (64%), Positives = 80/110 (72%), Gaps = 3/110 (2%)
Frame = -3
Query: 351 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 178
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C KLRG++P R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGKLRGVRPVR 60
Query: 177 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQK-IVKVLKAQ 31
P RL KK V R YGG +C KCV+ RI RAFLIEEQK IVKVLKAQ
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIIVKVLKAQ 110
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 135 bits (327), Expect = 4e-32
Identities = 69/110 (62%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Frame = -3
Query: 351 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 178
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 177 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVLKAQ 31
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVLKAQ
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQ 110
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 135 bits (327), Expect = 4e-32
Identities = 69/110 (62%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Frame = -3
Query: 351 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 178
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 177 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVLKAQ 31
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVLKAQ
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQ 110
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 135 bits (327), Expect = 4e-32
Identities = 69/110 (62%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Frame = -3
Query: 351 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 178
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 177 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVLKAQ 31
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVLKAQ
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQ 110
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 135 bits (327), Expect = 4e-32
Identities = 69/110 (62%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Frame = -3
Query: 351 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 178
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 177 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVLKAQ 31
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVLKAQ
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQ 110
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 135 bits (327), Expect = 4e-32
Identities = 69/110 (62%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Frame = -3
Query: 351 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 178
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 177 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVLKAQ 31
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVLKAQ
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQ 110
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 135 bits (327), Expect = 4e-32
Identities = 69/110 (62%), Positives = 79/110 (71%), Gaps = 3/110 (2%)
Frame = -3
Query: 351 MVQRLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CGQCKSKLRGIQPAR 178
MVQRLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG C +LRG++ R
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACGVCPGRLRGVRAVR 60
Query: 177 PAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKI-VKVLKAQ 31
P RL KK V R YGG +C KCV+ RI RAFLIEEQKI VKVLKAQ
Sbjct: 61 PKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAFLIEEQKIVVKVLKAQ 110
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 60.1 bits (139), Expect = 3e-09
Identities = 28/44 (63%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = -3
Query: 342 RLTFRRRLSYNTKSNQRRIVRTPGGRLVYQYVKKPKKIPR--CG 217
RLT+RRRLSYNT SN+ R+ RTPG R+VY Y KK K P+ CG
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPKSACG 44
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 23 SPGCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 124
SPGC + R FCS++ L TH+W++ PP
Sbjct: 49 SPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein.
Length = 580
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 23 SPGCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 124
SPGC + R FCS++ L TH+W++ PP
Sbjct: 422 SPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 23 SPGCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 124
SPGC + R FCS++ L TH+W++ PP
Sbjct: 49 SPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 33.5 bits (73), Expect = 0.25
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +2
Query: 23 SPGCAL--RTFTIFCSSMRKALTMRCLTHLWQRTPP 124
SPGC + R FCS++ L TH+W++ PP
Sbjct: 422 SPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>BC113377-1|AAI13378.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 1017 PEQVRAME 1024
>BC113375-1|AAI13376.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 1017 PEQVRAME 1024
>BC110884-1|AAI10885.1| 969|Homo sapiens FBXO18 protein protein.
Length = 969
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 886 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 942
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 943 PEQVRAME 950
>BC080629-1|AAH80629.1| 978|Homo sapiens FBXO18 protein protein.
Length = 978
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 895 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 951
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 952 PEQVRAME 959
>BC032674-1|AAH32674.2| 908|Homo sapiens FBXO18 protein protein.
Length = 908
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 825 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 881
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 882 PEQVRAME 889
>BC012762-1|AAH12762.2| 338|Homo sapiens FBXO18 protein protein.
Length = 338
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 255 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 311
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 312 PEQVRAME 319
>AL137186-6|CAI41074.1| 1094|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1094
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 1011 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1067
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 1068 PEQVRAME 1075
>AL137186-5|CAI41073.1| 1043|Homo sapiens F-box protein, helicase, 18
protein.
Length = 1043
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 1017 PEQVRAME 1024
>AL133069-1|CAB61392.1| 281|Homo sapiens hypothetical protein
protein.
Length = 281
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 198 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 254
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 255 PEQVRAME 262
>AK095343-1|BAC04535.1| 1043|Homo sapiens protein ( Homo sapiens cDNA
FLJ38024 fis, clone CTONG2012996, highly similar to Mus
musculus F-box protein FBX18 mRNA. ).
Length = 1043
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 1017 PEQVRAME 1024
>AK027496-1|BAB55154.1| 779|Homo sapiens protein ( Homo sapiens
cDNA FLJ14590 fis, clone NT2RM4001880, weakly similar to
PUTATIVE DNA HELICASE II HOMOLOG (EC 3.6.1.-). ).
Length = 779
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 696 VVRCCVGQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 752
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 753 PEQVRAME 760
>AK027381-1|BAB55073.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ14475 fis, clone MAMMA1001259, highly similar to
Mus musculus F-box protein FBX18 mRNA. ).
Length = 455
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 372 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 428
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 429 PEQVRAME 436
>AF456237-1|AAP97705.1| 1043|Homo sapiens testis protein protein.
Length = 1043
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 960 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1016
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 1017 PEQVRAME 1024
>AF454502-1|AAP97700.1| 1042|Homo sapiens hypothetical protein
protein.
Length = 1042
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 959 VVRCCVGQCNNAIP-VDTVLTMKKLLITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 1015
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 1016 PEQVRAME 1023
>AF380349-1|AAM73631.1| 969|Homo sapiens F-box DNA helicase 1
protein.
Length = 969
Score = 29.5 bits (63), Expect = 4.0
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = -3
Query: 231 IPRC--GQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRI-VRAFLIEE 61
+ RC GQC + + + ++ + Y + K GG LCH C +QRI AFL
Sbjct: 886 VVRCCVGQCNNAIP-VDTVLTMKKLPITYSNR--KENKGGYLCHSCAEQRIGPLAFLTAS 942
Query: 60 QKIVKVLK 37
+ V+ ++
Sbjct: 943 PEQVRAME 950
>Z99572-8|CAI23064.1| 753|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 753
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 359 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 392
>Z99572-7|CAI23063.1| 829|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 829
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 435 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 468
>Z99572-6|CAI23062.1| 645|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 645
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 373 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 406
>Z99572-5|CAI23058.1| 830|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 830
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 436 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 469
>Z99572-4|CAI23060.1| 646|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 646
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 374 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 407
>Z99572-3|CAI23057.1| 768|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 768
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 374 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 407
>Z99572-1|CAI23061.1| 768|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 768
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 374 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 407
>M60234-1|AAA35910.1| 830|Homo sapiens granule membrane protein-140
protein.
Length = 830
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 436 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 469
>M25322-1|AAA35911.1| 830|Homo sapiens protein ( Human granule
membrane protein-140 mRNA, complete cds. ).
Length = 830
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 436 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 469
>BC068533-1|AAH68533.1| 829|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 829
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 436 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 469
>BC028067-1|AAH28067.2| 789|Homo sapiens SELP protein protein.
Length = 789
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 435 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 468
>AL022146-8|CAI22758.1| 753|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 753
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 359 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 392
>AL022146-7|CAI22757.1| 829|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 829
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 435 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 468
>AL022146-6|CAI22756.1| 645|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 645
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 373 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 406
>AL022146-5|CAI22753.1| 830|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 830
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 436 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 469
>AL022146-4|CAI22755.1| 646|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 646
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 374 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 407
>AL022146-3|CAI22752.1| 768|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 768
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 374 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 407
>AL022146-1|CAI22751.1| 768|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 768
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 374 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 407
>AF542391-1|AAN06828.1| 830|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 830
Score = 28.3 bits (60), Expect = 9.3
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = -2
Query: 124 WWCPLP*MCQATHCQSL--PH*RTKNCEGPQGTTR 26
W P P +CQA CQ L P+ NC P G R
Sbjct: 436 WTAPAP-VCQALQCQDLPVPNEARVNCSHPFGAFR 469
>AF424541-1|AAP97294.1| 148|Homo sapiens unknown protein.
Length = 148
Score = 28.3 bits (60), Expect = 9.3
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 219 HTLGSSWAFLHTDKPSGHPVSLLFFFDL 302
H LG+ W LHT S H FF L
Sbjct: 27 HRLGTHWPLLHTKSDSAHVFFTQFFSSL 54
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,107,014
Number of Sequences: 237096
Number of extensions: 1392229
Number of successful extensions: 7733
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 7601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7726
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2698607930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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