Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19l03f
(326 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and coile... 96 2e-20
AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune... 96 2e-20
AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein. 96 2e-20
AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and coile... 96 2e-20
AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein. 96 2e-20
AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein. 96 2e-20
AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein. 96 2e-20
AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein. 92 4e-19
BC029559-1|AAH29559.1| 213|Homo sapiens chromosome 14 open read... 31 1.1
AK096173-1|BAC04716.1| 213|Homo sapiens protein ( Homo sapiens ... 31 1.1
BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor ho... 29 3.3
AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor... 29 3.3
BC117230-1|AAI17231.2| 356|Homo sapiens FADS6 protein protein. 29 4.4
BC113370-1|AAI13371.1| 673|Homo sapiens chromosome 20 open read... 29 4.4
BC105093-1|AAI05094.1| 673|Homo sapiens chromosome 20 open read... 29 4.4
BC065550-1|AAH65550.1| 577|Homo sapiens C20orf19 protein protein. 29 4.4
BC039296-1|AAH39296.1| 281|Homo sapiens C20orf19 protein protein. 29 4.4
AK094411-1|BAC04349.1| 374|Homo sapiens protein ( Homo sapiens ... 29 4.4
BC058930-1|AAH58930.1| 577|Homo sapiens BAT2D1 protein protein. 28 7.7
>BC000104-1|AAH00104.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/63 (68%), Positives = 55/63 (87%)
Frame = +1
Query: 136 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDR 315
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S R
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 316 QKK 324
Q+K
Sbjct: 64 QQK 66
>AY763589-1|AAV34755.1| 188|Homo sapiens xenogeneic cross-immune
protein protein.
Length = 188
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/63 (68%), Positives = 55/63 (87%)
Frame = +1
Query: 136 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDR 315
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S R
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 316 QKK 324
Q+K
Sbjct: 64 QQK 66
>AY359027-1|AAQ89386.1| 188|Homo sapiens STMF151 protein.
Length = 188
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/63 (68%), Positives = 55/63 (87%)
Frame = +1
Query: 136 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDR 315
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S R
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 316 QKK 324
Q+K
Sbjct: 64 QQK 66
>AL451074-8|CAH74064.1| 188|Homo sapiens transmembrane and
coiled-coil domains 1 protein.
Length = 188
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/63 (68%), Positives = 55/63 (87%)
Frame = +1
Query: 136 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDR 315
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S R
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 316 QKK 324
Q+K
Sbjct: 64 QQK 66
>AF277194-1|AAK07549.1| 149|Homo sapiens PNAS-136 protein.
Length = 149
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/63 (68%), Positives = 55/63 (87%)
Frame = +1
Query: 136 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDR 315
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S R
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 316 QKK 324
Q+K
Sbjct: 64 QQK 66
>AF070626-1|AAC25388.1| 230|Homo sapiens unknown protein.
Length = 230
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/63 (68%), Positives = 55/63 (87%)
Frame = +1
Query: 136 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDR 315
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S R
Sbjct: 46 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 105
Query: 316 QKK 324
Q+K
Sbjct: 106 QQK 108
>AB020980-1|BAA86974.1| 188|Homo sapiens membrane protein protein.
Length = 188
Score = 96.3 bits (229), Expect = 2e-20
Identities = 43/63 (68%), Positives = 55/63 (87%)
Frame = +1
Query: 136 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDR 315
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S R
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
Query: 316 QKK 324
Q+K
Sbjct: 64 QQK 66
>AF274935-1|AAK07514.1| 130|Homo sapiens PNAS-10 protein.
Length = 130
Score = 91.9 bits (218), Expect = 4e-19
Identities = 41/60 (68%), Positives = 52/60 (86%)
Frame = +1
Query: 136 MWSDSLLIVFISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDR 315
M++D+LLIVFIS+CTA L EG+TWVLVYRT+KY++LK EVE+QSKKLEK+KE +S R
Sbjct: 4 MFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESAGR 63
>BC029559-1|AAH29559.1| 213|Homo sapiens chromosome 14 open reading
frame 24 protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 166 ISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDRQKK 324
+S+C FLGE + VL T KYQ E R K+ E+ +E + S + +K+
Sbjct: 111 LSVCD-FLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEENRMSEEAEKQ 162
>AK096173-1|BAC04716.1| 213|Homo sapiens protein ( Homo sapiens
cDNA FLJ38854 fis, clone MESAN2010664. ).
Length = 213
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 166 ISICTAFLGEGLTWVLVYRTEKYQKLKVEVERQSKKLEKRKEAHGDSLDRQKK 324
+S+C FLGE + VL T KYQ E R K+ E+ +E + S + +K+
Sbjct: 111 LSVCD-FLGEKIASVLGISTPKYQYAIDEYYRMKKEEEEEEEENRMSEEAEKQ 162
>BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor
homolog (S. cerevisiae) protein.
Length = 586
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 235 QKLKVEVERQSKKLEKRKEAHGDSLDRQKK 324
+KLK E +++ KK +K +++ DS D +KK
Sbjct: 492 EKLKEEKKKKKKKKKKHRKSSSDSDDEEKK 521
>AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor
SLU7 protein.
Length = 586
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 235 QKLKVEVERQSKKLEKRKEAHGDSLDRQKK 324
+KLK E +++ KK +K +++ DS D +KK
Sbjct: 492 EKLKEEKKKKKKKKKKHRKSSSDSDDEEKK 521
>BC117230-1|AAI17231.2| 356|Homo sapiens FADS6 protein protein.
Length = 356
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 133 KMWSDSLLIVFISICTAFLGEGLT 204
K WS L+ F+ +CTAF E T
Sbjct: 113 KRWSKIWLLFFVEVCTAFTAEHAT 136
>BC113370-1|AAI13371.1| 673|Homo sapiens chromosome 20 open reading
frame 19 protein.
Length = 673
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 223 TEKYQKLKVEVERQSKKLEKRKEAHG 300
TEK QKLK+E E Q KK+ K++ G
Sbjct: 98 TEKLQKLKLEYETQIKKMLCSKDSLG 123
>BC105093-1|AAI05094.1| 673|Homo sapiens chromosome 20 open reading
frame 19 protein.
Length = 673
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 223 TEKYQKLKVEVERQSKKLEKRKEAHG 300
TEK QKLK+E E Q KK+ K++ G
Sbjct: 98 TEKLQKLKLEYETQIKKMLCSKDSLG 123
>BC065550-1|AAH65550.1| 577|Homo sapiens C20orf19 protein protein.
Length = 577
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 223 TEKYQKLKVEVERQSKKLEKRKEAHG 300
TEK QKLK+E E Q KK+ K++ G
Sbjct: 2 TEKLQKLKLEYETQIKKMLCSKDSLG 27
>BC039296-1|AAH39296.1| 281|Homo sapiens C20orf19 protein protein.
Length = 281
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +1
Query: 223 TEKYQKLKVEVERQSKKLEKRKEAHG 300
TEK QKLK+E E Q KK+ K++ G
Sbjct: 98 TEKLQKLKLEYETQIKKMLCSKDSLG 123
>AK094411-1|BAC04349.1| 374|Homo sapiens protein ( Homo sapiens
cDNA FLJ37092 fis, clone BRACE2017934. ).
Length = 374
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 133 KMWSDSLLIVFISICTAFLGEGLT 204
K WS L+ F+ +CTAF E T
Sbjct: 131 KRWSKIWLLFFVEVCTAFTAEHAT 154
>BC058930-1|AAH58930.1| 577|Homo sapiens BAT2D1 protein protein.
Length = 577
Score = 27.9 bits (59), Expect = 7.7
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 226 EKYQKLKVEVERQSKKLEKRKEAHGDSLDRQKK 324
EK ++L+ E E+Q + ++RK+ L+RQKK
Sbjct: 542 EKEKELEKEQEKQREMEKERKQEKEKELERQKK 574
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,530,716
Number of Sequences: 237096
Number of extensions: 622772
Number of successful extensions: 5710
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5701
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1685725862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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