Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19k20r
(836 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase (ubi... 131 3e-30
AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase prot... 131 3e-30
AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone oxidore... 131 3e-30
AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein. 131 3e-30
AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase (ubi... 103 8e-22
AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase ubiq... 77 6e-14
BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein. 71 5e-12
AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein. 31 6.8
AY130006-1|AAN05090.1| 90|Homo sapiens MU-MB-2.76 protein. 30 9.0
>BC003417-1|AAH03417.1| 355|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa protein.
Length = 355
Score = 131 bits (317), Expect = 3e-30
Identities = 73/170 (42%), Positives = 101/170 (59%)
Frame = -3
Query: 807 FDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAM 628
+D N ++RL Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAM
Sbjct: 118 YDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAM 173
Query: 627 YSQKFLSKAVRSTYYELRENTIEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALT 448
Y+Q F+ K Y E++ TI + + PHLVIY+D+PV +VQ I+K+ HE+ +T
Sbjct: 174 YNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KIT 230
Query: 447 PAFLTEIEKQYKNKYLRDIATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 298
A+L +IE YK +L +++ E+L Y EDIE L FD+
Sbjct: 231 SAYLQDIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AF087854-1|AAP97164.1| 354|Homo sapiens NADH dehydrogenase
protein.
Length = 354
Score = 131 bits (317), Expect = 3e-30
Identities = 73/170 (42%), Positives = 101/170 (59%)
Frame = -3
Query: 807 FDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAM 628
+D N ++RL Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAM
Sbjct: 117 YDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAM 172
Query: 627 YSQKFLSKAVRSTYYELRENTIEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALT 448
Y+Q F+ K Y E++ TI + + PHLVIY+D+PV +VQ I+K+ HE+ +T
Sbjct: 173 YNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KIT 229
Query: 447 PAFLTEIEKQYKNKYLRDIATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 298
A+L +IE YK +L +++ E+L Y EDIE L FD+
Sbjct: 230 SAYLQDIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 279
>AF087661-1|AAD09755.1| 355|Homo sapiens NADH-ubiquinone
oxidoreductase 42 kDa subunit protein.
Length = 355
Score = 131 bits (317), Expect = 3e-30
Identities = 73/170 (42%), Positives = 101/170 (59%)
Frame = -3
Query: 807 FDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAM 628
+D N ++RL Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAM
Sbjct: 118 YDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAM 173
Query: 627 YSQKFLSKAVRSTYYELRENTIEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALT 448
Y+Q F+ K Y E++ TI + + PHLVIY+D+PV +VQ I+K+ HE+ +T
Sbjct: 174 YNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KIT 230
Query: 447 PAFLTEIEKQYKNKYLRDIATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 298
A+L +IE YK +L +++ E+L Y EDIE L FD+
Sbjct: 231 SAYLQDIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AC013469-3|AAY14737.1| 333|Homo sapiens unknown protein.
Length = 333
Score = 131 bits (317), Expect = 3e-30
Identities = 73/170 (42%), Positives = 101/170 (59%)
Frame = -3
Query: 807 FDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAM 628
+D N ++RL Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAM
Sbjct: 118 YDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAM 173
Query: 627 YSQKFLSKAVRSTYYELRENTIEELMRPHLVIYLDLPVSKVQEAIKKRALSHEVTSKALT 448
Y+Q F+ K Y E++ TI + + PHLVIY+D+PV +VQ I+K+ HE+ +T
Sbjct: 174 YNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKKGDPHEM---KIT 230
Query: 447 PAFLTEIEKQYKNKYLRDIATHAELLVYDWTXXXXXXXXXEDIERLNFDQ 298
A+L +IE YK +L +++ E+L Y EDIE L FD+
Sbjct: 231 SAYLQDIENAYKKTFLPEMSEKCEVLQYSAREAQDSKKVVEDIEYLKFDK 280
>AB209440-1|BAD92677.1| 241|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 10, 42kDa precursor
variant protein.
Length = 241
Score = 103 bits (247), Expect = 8e-22
Identities = 53/108 (49%), Positives = 71/108 (65%)
Frame = -3
Query: 807 FDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAM 628
+D N ++RL Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAM
Sbjct: 123 YDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAM 178
Query: 627 YSQKFLSKAVRSTYYELRENTIEELMRPHLVIYLDLPVSKVQEAIKKR 484
Y+Q F+ K Y E++ TI + + PHLVIY+D+PV +VQ I+K+
Sbjct: 179 YNQGFIRKQCVDHYNEVKSVTICDYLPPHLVIYIDVPVPEVQRRIQKK 226
>AF453834-1|AAL50984.1| 429|Homo sapiens NADH dehydrogenase
ubiquinone 1 alpha subcomplex protein.
Length = 429
Score = 77.4 bits (182), Expect = 6e-14
Identities = 62/197 (31%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Frame = -3
Query: 807 FDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAM 628
+D N ++RL Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAM
Sbjct: 118 YDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAM 173
Query: 627 YSQKFLSKAVRS---TYY---------ELRENTIEELM---------RPHLVIYLDLPVS 511
Y+Q F+ K S T++ +L + EE++ +P + Y ++
Sbjct: 174 YNQGFIRKQCESALQTHFWTGVAGASGKLESGSSEEVLLINERGGRSKPGVDHYNEVKSV 233
Query: 510 KVQEAIKKRALSH------EVTSKALTPAFLTEIEKQYKNKYLRDIATHAELLVYDWTXX 349
+ + + + + E +T A+L +IE YK +L +++ E+L Y
Sbjct: 234 TICDYLPPHLVIYIDVPVPEPHEMKITSAYLQDIENAYKKTFLPEMSEKCEVLQYSAREA 293
Query: 348 XXXXXXXEDIERLNFDQ 298
EDIE L FD+
Sbjct: 294 QDSKKVVEDIEYLKFDK 310
>BC031332-1|AAH31332.1| 201|Homo sapiens NDUFA10 protein protein.
Length = 201
Score = 70.9 bits (166), Expect = 5e-12
Identities = 37/72 (51%), Positives = 46/72 (63%)
Frame = -3
Query: 807 FDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALAHLFNTGQGIVLERSPYSDFVFLEAM 628
+D N ++RL Q +Y +R QY DAL HL TGQG+VLERS +SDFVFLEAM
Sbjct: 118 YDDPRSNDGNSYRL----QSWLYSSRLLQYSDALEHLLTTGQGVVLERSIFSDFVFLEAM 173
Query: 627 YSQKFLSKAVRS 592
Y+Q F+ K S
Sbjct: 174 YNQGFIRKQCES 185
>AB058756-1|BAB47482.1| 708|Homo sapiens KIAA1853 protein protein.
Length = 708
Score = 30.7 bits (66), Expect = 6.8
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 559 GANASTSSYLSGSSCFQGSRSY*KTCSQSRGDQQS 455
G+ +STSS+ S SS SRSY ++ S+SR ++S
Sbjct: 625 GSLSSTSSWYSSSSSRSASRSYSRSWSRSRSRRRS 659
>AY130006-1|AAN05090.1| 90|Homo sapiens MU-MB-2.76 protein.
Length = 90
Score = 30.3 bits (65), Expect = 9.0
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 559 GANASTSSYLSGSSCFQGSRSY*KTCSQSRGDQQS 455
G+ +STSS+ S SS SRSY ++ S+SR ++S
Sbjct: 7 GSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRS 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,687,196
Number of Sequences: 237096
Number of extensions: 2578486
Number of successful extensions: 5152
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5147
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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