Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19k16r
(906 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 246 7e-65
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 246 7e-65
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 246 7e-65
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 246 7e-65
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 246 7e-65
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 246 9e-65
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 246 1e-64
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 245 2e-64
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 190 5e-48
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 125 3e-28
BC042683-1|AAH42683.1| 502|Homo sapiens TTC13 protein protein. 36 0.27
AL844165-2|CAI15331.1| 806|Homo sapiens tetratricopeptide repea... 36 0.27
AL844165-1|CAI15330.1| 860|Homo sapiens tetratricopeptide repea... 36 0.27
AL591292-2|CAI17216.1| 806|Homo sapiens tetratricopeptide repea... 36 0.27
AL591292-1|CAI17217.1| 860|Homo sapiens tetratricopeptide repea... 36 0.27
AK075561-1|BAC11700.1| 806|Homo sapiens protein ( Homo sapiens ... 36 0.27
AK075386-1|BAC11586.1| 860|Homo sapiens protein ( Homo sapiens ... 36 0.27
AK026237-1|BAB15407.1| 308|Homo sapiens protein ( Homo sapiens ... 36 0.27
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 246 bits (603), Expect = 7e-65
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 1/289 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTAD-P 729
F KNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K + P
Sbjct: 20 FDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 79
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 80 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRA 139
Query: 548 LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQ 369
LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +Q
Sbjct: 140 LHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQ 199
Query: 368 DAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXX 189
DA+Y E+++ G WE AE L +A +
Sbjct: 200 DAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIV 258
Query: 188 XXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 42
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 259 LSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 246 bits (603), Expect = 7e-65
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 1/289 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTAD-P 729
F KNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K + P
Sbjct: 20 FDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 79
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 80 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRA 139
Query: 548 LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQ 369
LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +Q
Sbjct: 140 LHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQ 199
Query: 368 DAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXX 189
DA+Y E+++ G WE AE L +A +
Sbjct: 200 DAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIV 258
Query: 188 XXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 42
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 259 LSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 246 bits (603), Expect = 7e-65
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 1/289 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTAD-P 729
F KNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K + P
Sbjct: 20 FDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 79
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 80 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRA 139
Query: 548 LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQ 369
LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +Q
Sbjct: 140 LHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQ 199
Query: 368 DAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXX 189
DA+Y E+++ G WE AE L +A +
Sbjct: 200 DAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIV 258
Query: 188 XXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 42
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 259 LSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 246 bits (603), Expect = 7e-65
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 1/289 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTAD-P 729
F KNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K + P
Sbjct: 20 FDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 79
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 80 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRA 139
Query: 548 LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQ 369
LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +Q
Sbjct: 140 LHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQ 199
Query: 368 DAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXX 189
DA+Y E+++ G WE AE L +A +
Sbjct: 200 DAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIV 258
Query: 188 XXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 42
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 259 LSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 246 bits (603), Expect = 7e-65
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 1/289 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTAD-P 729
F KNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K + P
Sbjct: 20 FDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 79
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 80 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRA 139
Query: 548 LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQ 369
LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +Q
Sbjct: 140 LHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQ 199
Query: 368 DAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXX 189
DA+Y E+++ G WE AE L +A +
Sbjct: 200 DAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIV 258
Query: 188 XXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 42
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 259 LSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 246 bits (602), Expect = 9e-65
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 1/289 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTAD-P 729
F KNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K + P
Sbjct: 20 FDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 79
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 80 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRA 139
Query: 548 LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQ 369
LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +Q
Sbjct: 140 LHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQ 199
Query: 368 DAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXX 189
DA+Y E+++ G WE AE L +A +
Sbjct: 200 DAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSCYPETLVNLIV 258
Query: 188 XXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 42
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 259 LSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 246 bits (601), Expect = 1e-64
Identities = 124/289 (42%), Positives = 180/289 (62%), Gaps = 1/289 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTAD-P 729
F KNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K + P
Sbjct: 20 FDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 79
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 80 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPDAALRA 139
Query: 548 LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQ 369
LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +Q
Sbjct: 140 LHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQ 199
Query: 368 DAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXX 189
DA+Y E+++ G WE AE L +A +
Sbjct: 200 DAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIV 258
Query: 188 XXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 42
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 259 LSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 245 bits (599), Expect = 2e-64
Identities = 123/289 (42%), Positives = 179/289 (61%), Gaps = 1/289 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTAD-P 729
F KNAFY+G+YQQ INEA V S+P ++RD FLYR+Y+AQ + +V E+K + P
Sbjct: 19 FDVKNAFYIGSYQQCINEAHGVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 78
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 79 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRA 138
Query: 548 LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQ 369
LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +Q
Sbjct: 139 LHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQ 198
Query: 368 DAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXX 189
DA+Y E+++ G WE AE L +A +
Sbjct: 199 DAYYIFQEMAD-KCSPTLLLLNGQAACHIAQGRWEAAEGLLQEALDKDSGYPETLVNLIV 257
Query: 188 XXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 42
GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 258 LSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 306
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 190 bits (464), Expect = 5e-48
Identities = 97/243 (39%), Positives = 146/243 (60%), Gaps = 1/243 (0%)
Frame = -2
Query: 767 YRIVQQELKTAD-PMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAAT 591
+ +V E+K + P LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+
Sbjct: 3 FGVVLDEIKPSSAPELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAAS 62
Query: 590 IYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLA 411
IY H+ N +AAL+ LH +SLE A T+Q LL ++R DLARK+LK +QD+++D TLTQLA
Sbjct: 63 IYLHDQNPDAALRALHQGDSLECTAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLA 122
Query: 410 QAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAAS 231
AW++L GG +QDA+Y E+++ G WE AE L +A
Sbjct: 123 TAWVSLATGGEKLQDAYYIFQEMAD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALD 181
Query: 230 RAPQXXXXXXXXXXXXXXXGKPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQY 51
+ GKPPEV+ RYL+QL D+H HPF+KEY+AK ++F RL QY
Sbjct: 182 KDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQY 241
Query: 50 QPS 42
PS
Sbjct: 242 APS 244
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 125 bits (301), Expect = 3e-28
Identities = 57/128 (44%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Frame = -2
Query: 905 FRCKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELK-TADP 729
F KNAFY+G+YQQ INEAQ V S+P ++RD FLYR+Y+AQ + +V E+K ++ P
Sbjct: 20 FDVKNAFYIGSYQQCINEAQRVKLSSPERDVERDVFLYRAYLAQRKFGVVLDEIKPSSAP 79
Query: 728 MLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKI 549
LQ ++ DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+
Sbjct: 80 ELQAVRMFADYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRA 139
Query: 548 LHNAESLE 525
LH +SLE
Sbjct: 140 LHQGDSLE 147
>BC042683-1|AAH42683.1| 502|Homo sapiens TTC13 protein protein.
Length = 502
Score = 35.5 bits (78), Expect = 0.27
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = -2
Query: 881 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 702
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 341 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 398
Query: 701 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 612
Y L+P + S+++A + A +A G E++ +I
Sbjct: 399 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 434
>AL844165-2|CAI15331.1| 806|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 806
Score = 35.5 bits (78), Expect = 0.27
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = -2
Query: 881 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 702
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 701 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 612
Y L+P + S+++A + A +A G E++ +I
Sbjct: 703 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 738
>AL844165-1|CAI15330.1| 860|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 860
Score = 35.5 bits (78), Expect = 0.27
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = -2
Query: 881 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 702
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 701 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 612
Y L+P + S+++A + A +A G E++ +I
Sbjct: 757 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 792
>AL591292-2|CAI17216.1| 806|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 806
Score = 35.5 bits (78), Expect = 0.27
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = -2
Query: 881 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 702
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 701 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 612
Y L+P + S+++A + A +A G E++ +I
Sbjct: 703 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 738
>AL591292-1|CAI17217.1| 860|Homo sapiens tetratricopeptide repeat
domain 13 protein.
Length = 860
Score = 35.5 bits (78), Expect = 0.27
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = -2
Query: 881 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 702
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 701 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 612
Y L+P + S+++A + A +A G E++ +I
Sbjct: 757 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 792
>AK075561-1|BAC11700.1| 806|Homo sapiens protein ( Homo sapiens
cDNA PSEC0261 fis, clone NT2RP3004063, weakly similar to
MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR. ).
Length = 806
Score = 35.5 bits (78), Expect = 0.27
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = -2
Query: 881 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 702
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 645 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 702
Query: 701 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 612
Y L+P + S+++A + A +A G E++ +I
Sbjct: 703 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 738
>AK075386-1|BAC11586.1| 860|Homo sapiens protein ( Homo sapiens
cDNA PSEC0076 fis, clone NT2RP2003471, weakly similar to
MITOCHONDRIAL PRECURSOR PROTEINS IMPORT RECEPTOR3. ).
Length = 860
Score = 35.5 bits (78), Expect = 0.27
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = -2
Query: 881 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 702
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 699 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 756
Query: 701 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 612
Y L+P + S+++A + A +A G E++ +I
Sbjct: 757 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 792
>AK026237-1|BAB15407.1| 308|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22584 fis, clone HSI02661. ).
Length = 308
Score = 35.5 bits (78), Expect = 0.27
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Frame = -2
Query: 881 VGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGNYRIVQQELKTADPMLQPLKSLV 702
VGN ++ E Q+ T L + DA LY+ A+G I+ E AD + + SLV
Sbjct: 147 VGNILFSV-ETQTTEERTQLYHAEIDA-LYKDLTAKGKVLILSSEFGEADAVCNLILSLV 204
Query: 701 DY---LLPDANKSAIVA---DIDARVAKGTELSNEI 612
Y L+P + S+++A + A +A G E++ +I
Sbjct: 205 YYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKI 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,068,427
Number of Sequences: 237096
Number of extensions: 2597693
Number of successful extensions: 10499
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10480
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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