Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19k03f
(766 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0303 - 3337454-3337544,3338358-3338521,3338624-3338805,333... 161 7e-40
06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334 138 4e-33
03_01_0459 + 3533718-3533916,3535009-3535150,3535290-3535410,353... 113 1e-25
03_06_0347 + 33293915-33294104,33295143-33295284,33295365-332954... 105 3e-23
07_01_0680 + 5128023-5128212,5128629-5128667,5129496-5129637,512... 93 2e-19
02_05_1125 + 34282559-34282796,34283247-34283437,34283540-342836... 87 1e-17
07_01_0987 + 8320205-8320472,8321549-8321690,8321773-8321893,832... 65 5e-11
12_02_1272 + 27475302-27475491,27476792-27476876,27477076-274771... 64 9e-11
01_01_0945 - 7439776-7440026,7440109-7440269,7440824-7441011 59 4e-09
01_07_0284 - 42472309-42472359,42472778-42472864,42473384-424734... 51 1e-06
01_06_1457 + 37508187-37508421,37509012-37509109,37509791-375099... 49 5e-06
01_05_0508 - 22804809-22805231,22805775-22806797 38 0.007
04_04_1102 - 30909490-30909630,30909954-30910108,30910206-309104... 29 3.1
11_05_0010 - 18356835-18357080,18357475-18357672,18357780-183580... 28 7.1
10_08_1005 - 22179407-22180122,22180210-22180653,22180737-221808... 28 7.1
01_06_0540 + 30084698-30086211,30086422-30086485,30086667-30086771 28 7.1
02_01_0265 - 1754861-1755063,1755186-1755360,1755558-1755653,175... 28 9.4
>10_01_0303 -
3337454-3337544,3338358-3338521,3338624-3338805,
3339088-3339322
Length = 223
Score = 161 bits (390), Expect = 7e-40
Identities = 83/224 (37%), Positives = 133/224 (59%), Gaps = 7/224 (3%)
Frame = +1
Query: 52 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPH-DDKLTYSHGNYLFHYI---- 216
M I++++VARGTVVLA+++ GN VA +IL K+PP + +L ++ Y+FH +
Sbjct: 1 MAIVYAVVARGTVVLAEFSAVSGNAGAVARRILEKLPPDAESRLCFAQDRYIFHVLRSPP 60
Query: 217 --AENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATE 390
A + L + C+ +D F R FL+L +I+ R + YAMN EF RVL +
Sbjct: 61 PAAADGLTFLCMANDTFGRRIPFLYLEDIQMRFIKNYGRIAHNALAYAMNDEFSRVLHQQ 120
Query: 391 MKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRA 570
M+++S + D ++R+ GE+ +MV NI+ + RGE++ LLV+K + S+ +R
Sbjct: 121 MEYFSSNPSADTLNRLRGEIH---TVMVDNIEKILDRGERISLLVDKTSTMQDSAFHFRK 177
Query: 571 TSRTLQRSLFWKNIKMYVILVSIAALAVYLIGAMACGGLAWKSC 702
SR L+R+L+ KN K+ +L ++ L +YLI A CGGL+ SC
Sbjct: 178 QSRRLRRALWMKNAKLLAVLTAVIVLLLYLIIAAFCGGLSLPSC 221
>06_01_0521 - 3773749-3773931,3774295-3774485,3775115-3775334
Length = 197
Score = 138 bits (334), Expect = 4e-33
Identities = 65/197 (32%), Positives = 116/197 (58%), Gaps = 3/197 (1%)
Frame = +1
Query: 52 MPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPH--DDKLTYSHGNYLFHYIAEN 225
M IL+++VARGTVVLA+++ N VA Q+L ++P D ++Y+ Y+FH +
Sbjct: 1 MAILYAVVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSYTQDRYVFHAKRTD 60
Query: 226 KLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYS 405
+ C+ D+ R F FL +I R + Y MN EF RVL+ +M +YS
Sbjct: 61 GITALCMADEAAGRRIPFAFLEDIHGRFVKTYGRAALTSLAYGMNDEFSRVLSQQMDYYS 120
Query: 406 ESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTL 585
+ D I+R+ GE+ +++ +M+ NID + RG++L++LV+K N+ +++ ++ +R
Sbjct: 121 NDPNADRINRMRGEISQVRTVMIDNIDKVLERGDRLDMLVDKTANMQGNTIRFKRQARRF 180
Query: 586 QRSLFWKNIKM-YVILV 633
+ + +W+N+K+ YVI +
Sbjct: 181 RNTTWWRNVKLTYVIFL 197
>03_01_0459 +
3533718-3533916,3535009-3535150,3535290-3535410,
3535513-3535575,3535677-3535823
Length = 223
Score = 113 bits (273), Expect = 1e-25
Identities = 59/212 (27%), Positives = 111/212 (52%), Gaps = 2/212 (0%)
Frame = +1
Query: 58 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 237
+++S VARG VVLA +A GNF VA Q L K+P +++ +Y+ + F+Y + Y
Sbjct: 9 LVYSFVARGAVVLADHAEVSGNFASVAAQCLQKLPSTNNRHSYNCDGHTFNYHVHDGFTY 68
Query: 238 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPY-AMNSEFGRVLATEMKHY-SES 411
+ + R F+ +K ++ E+G L MK+ +
Sbjct: 69 CVVATESAGRQLPVGFIERVKEDFSKKYSGGKAKNATANSLKREYGPKLKEHMKYCDAHP 128
Query: 412 RDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQR 591
++D +++V ++ E+K +M++NI+ + RGEK+ELLV+K ++L + + +R ++R
Sbjct: 129 EEIDKLAKVKAQVTEVKGVMMQNIEKVLDRGEKIELLVDKTEDLRSQAQDFRKAGTKIRR 188
Query: 592 SLFWKNIKMYVILVSIAALAVYLIGAMACGGL 687
++W+N+KM +I+ I + +I C L
Sbjct: 189 KMWWENMKMKLIVFGIVVALILVIILTVCRDL 220
>03_06_0347 +
33293915-33294104,33295143-33295284,33295365-33295485,
33295590-33295652,33296524-33296553,33297411-33297905
Length = 346
Score = 105 bits (253), Expect = 3e-23
Identities = 52/172 (30%), Positives = 95/172 (55%), Gaps = 2/172 (1%)
Frame = +1
Query: 58 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 237
++++ VARGTV+LA+Y GNFT +A Q L K+P ++K TY+ + F+Y+ E+ Y
Sbjct: 6 LIYAFVARGTVILAEYTEFTGNFTTIASQCLMKLPASNNKFTYNCDGHTFNYLVEDGFTY 65
Query: 238 FCITDDKFQRSRAFLFLNEIKRR-XXXXXXXXXXXXIPYAMNSEFGRVLATEMKH-YSES 411
+ + R FL+ +K ++N +FG L M++
Sbjct: 66 CVVAVESVGRQIPIAFLDRVKDDFTKRYAGGKAATAAANSLNRDFGSKLKEHMQYCVDHP 125
Query: 412 RDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYR 567
++ +++V ++ E+K +M++NI+ + RGEK+ELLV+K +NL + + +R
Sbjct: 126 EEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR 177
>07_01_0680 +
5128023-5128212,5128629-5128667,5129496-5129637,
5129727-5129847,5129951-5130013,5130114-5130203,
5130572-5130619,5131114-5131260
Length = 279
Score = 93.5 bits (222), Expect = 2e-19
Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 15/181 (8%)
Frame = +1
Query: 58 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENK--- 228
++++ VARGTVVLA+Y GNFT +A Q L K+P ++K TY+ + F+Y+ E+
Sbjct: 6 LIYAFVARGTVVLAEYTEFTGNFTTIAAQCLQKLPASNNKFTYNCDGHTFNYLVEDGFSS 65
Query: 229 ----------LVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPY-AMNSEFGR 375
L Y + + R FL+ +K ++N EFG
Sbjct: 66 NRIGILGIQGLAYCVVAVESVGRQIPIAFLDRVKEDFTKRYGGGKAATAAANSLNREFGS 125
Query: 376 VLATEMKH-YSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATS 552
L M++ ++ +++V ++ E+K +M++NI+ + RGEK+ELLV+K +NL +
Sbjct: 126 KLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQ 185
Query: 553 S 555
+
Sbjct: 186 N 186
>02_05_1125 +
34282559-34282796,34283247-34283437,34283540-34283629,
34283630-34283793,34284139-34284352
Length = 298
Score = 87.0 bits (206), Expect = 1e-17
Identities = 63/224 (28%), Positives = 107/224 (47%), Gaps = 37/224 (16%)
Frame = +1
Query: 58 ILFSIVARGTVVLAKYATCQ-GNFTEVAEQILSKIPPHDD------KLTYSHGNYLFHYI 216
I ++ VARG VV+A++ N VA QIL ++ D ++Y+ ++FH
Sbjct: 4 IQYAAVARGAVVMAEHGDAAFPNAGAVARQILDRLSAGDGGGGGDCNISYTQDLHVFHVK 63
Query: 217 AENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMK 396
+ + C+ DD R F FL +I R + YAMN EF RVL +M
Sbjct: 64 RTDGVTALCMADDAAGRRIPFAFLEDIHGRFVKTYGRAALTALAYAMNDEFSRVLGQQMD 123
Query: 397 HYSESRDLDNISRVHGELDEL-------------------KN------IMVKNI-----D 486
+YS + D ISR+ GE+D+ KN + V+N+ D
Sbjct: 124 YYSNDPNADRISRMRGEMDQYFSYLSVVKLRVDGASYKFRKNDINENFLQVRNVMIDNID 183
Query: 487 NMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIKM 618
+ RG++LELLV+K + +++ ++ +R + +++W+N+K+
Sbjct: 184 KVLERGDRLELLVDKTATMQGNTMRFKRQARRFRNTVWWRNVKL 227
>07_01_0987 +
8320205-8320472,8321549-8321690,8321773-8321893,
8322190-8322264,8322784-8322846,8322934-8323086
Length = 273
Score = 65.3 bits (152), Expect = 5e-11
Identities = 51/245 (20%), Positives = 109/245 (44%), Gaps = 36/245 (14%)
Frame = +1
Query: 58 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDD---------KLTYSHGNYLFH 210
++++ VARGT VLA+Y GNF +A Q L ++P + +Y+ + F+
Sbjct: 23 LIYAFVARGTAVLAEYTEFTGNFPALAAQCLQRLPASGGGGSGGGAPARFSYACDGHTFN 82
Query: 211 YIAENKLVYFCITDDKFQRSRAFLFLNEIKRR-XXXXXXXXXXXXIPYAMNSEFGRVLAT 387
++ Y + + ++ + FL +K + ++N E+G V+
Sbjct: 83 FLLHRGYAYCVVAKESVPKNVSVAFLERLKDDFMKRYGGGKADTALAKSLNKEYGPVIKQ 142
Query: 388 EMKH-YSESRDLDNISRVHGELDELKNIMVKNID---------------NMAMRG----- 504
M++ S +++ +V ++ E+KNIM++NI+ + + G
Sbjct: 143 HMQYVLDHSEEIEKTLKVQAQVSEVKNIMLENIEKVWSTFAVGCPLFFTELILMGFLFKK 202
Query: 505 -----EKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIKMYVILVSIAALAVYLIGA 669
EKL L +K +L + + ++ ++R + +N+K+ ++++ I L V ++
Sbjct: 203 TLGRGEKLSELQDKTSDLQSQAQEFKKKGVKIRRKTWLQNMKIKLVVLGILLLLVIIVWV 262
Query: 670 MACGG 684
C G
Sbjct: 263 SVCQG 267
>12_02_1272 +
27475302-27475491,27476792-27476876,27477076-27477196,
27477443-27477586
Length = 179
Score = 64.5 bits (150), Expect = 9e-11
Identities = 40/146 (27%), Positives = 71/146 (48%)
Frame = +1
Query: 58 ILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVY 237
+++++VARGTVVLA++ GNF ++A Q L K+P D++LTY+ + F+++ Y
Sbjct: 6 LIYAMVARGTVVLAEHTAYAGNFRDIAAQCLQKLPAGDNRLTYTCDAHTFNFLIHQGYAY 65
Query: 238 FCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKHYSESRD 417
+ + R L+ IK + G + M H E
Sbjct: 66 CVVATESSGRQIPLALLDMIKE--------------DFNKRPRLGEQMKYCMDHPEE--- 108
Query: 418 LDNISRVHGELDELKNIMVKNIDNMA 495
+ +++V ++ E+K IM++NID A
Sbjct: 109 VSKLAKVKAQVSEVKGIMMENIDKAA 134
>01_01_0945 - 7439776-7440026,7440109-7440269,7440824-7441011
Length = 199
Score = 58.8 bits (136), Expect = 4e-09
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +1
Query: 148 LSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXX 327
LSK +++ G YLFHYI E ++ Y + D + + AF +L ++K
Sbjct: 43 LSKGQHEASRMSIETGPYLFHYIIEGRVCYLTMCDCSYPKKLAFQYLEDLKNEFERVNGN 102
Query: 328 XXXXXI-PYAMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRG 504
PYA +F + K Y ++R N+++++ EL E+ IM +N + G
Sbjct: 103 QIETAARPYAF-IKFDTFIQKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNFQEVLGVG 161
Query: 505 EKLE 516
EKL+
Sbjct: 162 EKLD 165
>01_07_0284 -
42472309-42472359,42472778-42472864,42473384-42473449,
42474608-42474712,42475129-42475200,42475421-42475543
Length = 167
Score = 50.8 bits (116), Expect = 1e-06
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Frame = +1
Query: 220 ENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGRVLATEMKH 399
+N L TDD + AF LN + N++ + L +
Sbjct: 41 DNGLCAIAFTDDHYPVRSAFSLLNTVLEEYHKTFGERWRTA--KTDNTQPWQYLDDALTK 98
Query: 400 YSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNL-ATSSVSYRATS 576
Y + + D + ++ +LDE K I+ K ID++ RGE+L+ LV K+ +L A S + Y+
Sbjct: 99 YQDPAEADKLLKIQRDLDETKIILHKTIDSVLSRGERLDSLVEKSSDLSAASQMFYKQAK 158
Query: 577 RT 582
+T
Sbjct: 159 KT 160
>01_06_1457 +
37508187-37508421,37509012-37509109,37509791-37509904,
37510361-37510426,37510659-37510745,37510902-37511012
Length = 236
Score = 48.8 bits (111), Expect = 5e-06
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Frame = +1
Query: 133 VAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXX 312
VA + + P + + H Y H N L DD + AF LN++
Sbjct: 59 VARTVAQRTQP-GQRQSVQHEEYKVHSHNRNGLCAVAFMDDHYPVRSAFSLLNKVLDEYQ 117
Query: 313 XXXXXXXXXXIPYAMNS-EFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDN 489
A ++ + L + + + + D + ++ +LDE K I+ K I++
Sbjct: 118 KAFGDSWKAATKDATDAAQQWPFLTDALTKFQDPAEADKLMKIQRDLDETKIILHKTIES 177
Query: 490 MAMRGEKLELLVNKADNLATSS 555
+ RGE+L+ LV K+ +L+ +S
Sbjct: 178 VLQRGERLDSLVEKSSDLSAAS 199
>01_05_0508 - 22804809-22805231,22805775-22806797
Length = 481
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +1
Query: 28 VSFTRLFTMPILFSIVARGTVVLAKYATCQGNFTEVA--EQILSKIPPHDDKLTYSHGNY 201
VSF R F +P+L ++ G + A+C N T VA ++I + IP H + Y + Y
Sbjct: 311 VSFIRSFNLPLL--LLGGGGYTINHVASCWCNETAVAIGKEIPNDIPKHGFDVFYKNQEY 368
Query: 202 LFHYIAENK 228
HY E K
Sbjct: 369 KLHYKLETK 377
>04_04_1102 -
30909490-30909630,30909954-30910108,30910206-30910488,
30910618-30910755
Length = 238
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 561 VSRYFSHTSTLSILEEYQNVCHIGVHSSIGGLLNRSDGVWR 683
V+R F S + L +V H+ ++SSI ++ SDG+W+
Sbjct: 152 VARAFGDQSLKAHLSSEPDVRHVPINSSIEFVILASDGLWK 192
>11_05_0010 - 18356835-18357080,18357475-18357672,18357780-18358046,
18358870-18359067,18359151-18359417,18359524-18359724,
18359807-18361363,18361499-18361859,18362602-18363467
Length = 1386
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +1
Query: 7 FGNIVFFVSFTRLFTMPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTY 186
FG + ++ P L +I +G VVLAK C G E + + +PPH +
Sbjct: 1058 FGRAGWCFDAIGIYVNPDLQTIKDKGKVVLAKIGPCGGKGGEACDIM---VPPHHLESVT 1114
Query: 187 SHGNYLFH 210
N + H
Sbjct: 1115 ICSNIVIH 1122
>10_08_1005 - 22179407-22180122,22180210-22180653,22180737-22180861,
22180939-22181169,22181250-22181805,22181896-22182312,
22182405-22183216,22183653-22183738,22184464-22184534,
22184553-22185573,22186018-22186062,22186252-22186326,
22186797-22186871
Length = 1557
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 46 FTMPILFSIVARGTVVLAKYATCQGNFTEVAEQILSKIP-PHDDKLTYSHGNYL 204
F +P SI R KY+TC ++ + LSKIP P D + Y+
Sbjct: 1395 FVLPDSSSIYKRQKTSEGKYSTCSFGDGQLTSKCLSKIPLPADQHTSLDDVQYI 1448
>01_06_0540 + 30084698-30086211,30086422-30086485,30086667-30086771
Length = 560
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +3
Query: 555 SVVSRYFSHTSTLSILEEYQNVCHIGVHSSIGGLLNRSDGVWRP 686
S V R F+H S L+E Q G H S G L S W P
Sbjct: 510 SSVIRSFNHMVLFSFLKEQQECLLFGEHLSSGEGLRLSPQHWAP 553
>02_01_0265 -
1754861-1755063,1755186-1755360,1755558-1755653,
1756110-1756256,1756343-1756511,1756661-1756812,
1756898-1756968,1757064-1757247,1757332-1757523,
1757664-1757771
Length = 498
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +1
Query: 358 NSEFGRVLATEMKHYSESRDLDNISRVHGELDELKN--IMVKNIDNMAMRGEKLELLVNK 531
N E G L ++ SE RDL +SR++ E+ ELK ++ KN + + K EL N
Sbjct: 58 NDEMGTELIDQLT--SEERDL--LSRLNPEITELKEKFLLCKN-SRIEIETRKEELETNL 112
Query: 532 ADNL 543
+ NL
Sbjct: 113 STNL 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,289,018
Number of Sequences: 37544
Number of extensions: 345803
Number of successful extensions: 869
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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