Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19k03f
(766 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical pr... 64 1e-10
AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical... 58 7e-09
AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin... 58 9e-09
AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein. 58 9e-09
AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein. 58 9e-09
U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical pr... 55 5e-08
Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF239889-1|AAF45301.1| 118|Caenorhabditis elegans synaptobrevin... 46 3e-05
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 33 0.17
>U67949-6|AAB07559.2| 214|Caenorhabditis elegans Hypothetical
protein F55A4.1 protein.
Length = 214
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Frame = +1
Query: 124 FTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLVYFCITDDKFQRSRAFLFLNEIKR 303
++ A+ + K+ + + G ++FHYI + + D F R AF +L++I +
Sbjct: 34 YSNQAKMLFKKLNGAPAQQSVESGPFVFHYIIVQNICALVLCDRNFPRKVAFQYLSDIGQ 93
Query: 304 RXXXXXXXXXXXXI-PYAMNSEFGRVLATEMKHYSESRDLDNISRVHGELDELKNIMVKN 480
+ PY EF + + + Y ++ ++ V EL ++ IMV N
Sbjct: 94 EFLNENSSRIEQVVRPYHF-LEFDKYIQQAKQRYGDTNK-HAMNTVSNELQDVTRIMVTN 151
Query: 481 IDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQR 591
I+++ RGE L +L N+A L+ S YR ++ L R
Sbjct: 152 IEDVIHRGEALNILENRASELSGMSKKYRDDAKALNR 188
>AC084158-24|AAM15622.1| 245|Caenorhabditis elegans Hypothetical
protein Y69A2AR.6 protein.
Length = 245
Score = 58.0 bits (134), Expect = 7e-09
Identities = 24/76 (31%), Positives = 49/76 (64%)
Frame = +1
Query: 436 VHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIK 615
+ ++D+++ +M N++ + RGE+LE + N+ + L TS+ S+++T+R +QR KN+K
Sbjct: 159 IRRQVDDVRQVMADNVERIMERGERLENMENRTEALRTSATSFKSTARRVQRHFCQKNLK 218
Query: 616 MYVILVSIAALAVYLI 663
+IL+ + + V I
Sbjct: 219 WTLILLLVVTIIVAAI 234
>AF067949-5|AAC19234.1| 109|Caenorhabditis elegans Synaptobrevin
related protein 1 protein.
Length = 109
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +1
Query: 427 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWK 606
+ + ++DE+ IM N++ + R +KL L ++AD L + + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 607 NIKMYVILVSIAALAVYLIGAMACG 681
NIKM +I+ +I + + +I A G
Sbjct: 84 NIKMMIIMCAIVVILIIIIVLWAGG 108
>AF003282-1|AAB61235.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +1
Query: 427 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWK 606
+ + ++DE+ IM N++ + R +KL L ++AD L + + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 607 NIKMYVILVSIAALAVYLIGAMACG 681
NIKM +I+ +I + + +I A G
Sbjct: 84 NIKMMIIMCAIVVILIIIIVLWAGG 108
>AF003281-1|AAB61234.1| 109|Caenorhabditis elegans SNB-1 protein.
Length = 109
Score = 57.6 bits (133), Expect = 9e-09
Identities = 26/85 (30%), Positives = 49/85 (57%)
Frame = +1
Query: 427 ISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWK 606
+ + ++DE+ IM N++ + R +KL L ++AD L + + ++ TL+R +WK
Sbjct: 24 LQQTQAQVDEVVGIMKVNVEKVLERDQKLSQLDDRADALQEGASQFEKSAATLKRKYWWK 83
Query: 607 NIKMYVILVSIAALAVYLIGAMACG 681
NIKM +I+ +I + + +I A G
Sbjct: 84 NIKMMIIMCAIVVILIIIIVLWAGG 108
>U00031-8|AAK18869.1| 201|Caenorhabditis elegans Hypothetical
protein B0361.10 protein.
Length = 201
Score = 55.2 bits (127), Expect = 5e-08
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Frame = +1
Query: 199 YLFH-YIAENKLVYFCITDDKFQRSRAFLFLNEIKRRXXXXXXXXXXXXIPYAMNSEFGR 375
YL H Y+ + L C+TD ++Q+ A FL + I + +
Sbjct: 66 YLVHCYVRNDGLSAVCVTDAEYQQRVAMSFLGRVLDDFTTRVPATQWPGIRSDKDCSYTG 125
Query: 376 VLATEMKHYSESRDLDNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSS 555
L ++ + R+ D ++RV E++E K +M I ++ RGEKL+ LV K++NL+ S
Sbjct: 126 -LKDLLEKWQNPREADPMTRVQEEVEETKMVMHNTIQSVLDRGEKLDDLVKKSENLSDQS 184
Query: 556 VSYRATSRTLQR 591
+ ++R + +
Sbjct: 185 KMFYTSARKMNK 196
>Z82256-8|CAJ76927.1| 113|Caenorhabditis elegans Hypothetical
protein B0513.9b protein.
Length = 113
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/99 (28%), Positives = 55/99 (55%)
Frame = +1
Query: 421 DNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLF 600
+ + + ++D +K +MV N++ + RGE+L+ + +++ L +S +++ T+R +QR
Sbjct: 16 EKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQRKFC 75
Query: 601 WKNIKMYVILVSIAALAVYLIGAMACGGLAWKSCVG*SN 717
N K VIL SI L V+++ + L W +G N
Sbjct: 76 MLNAKWTVIL-SIVILIVFVVLLLLI--LHWTGVIGKRN 111
>Z82256-7|CAC70077.1| 116|Caenorhabditis elegans Hypothetical
protein B0513.9a protein.
Length = 116
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/99 (28%), Positives = 55/99 (55%)
Frame = +1
Query: 421 DNISRVHGELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLF 600
+ + + ++D +K +MV N++ + RGE+L+ + +++ L +S +++ T+R +QR
Sbjct: 19 EKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQRKFC 78
Query: 601 WKNIKMYVILVSIAALAVYLIGAMACGGLAWKSCVG*SN 717
N K VIL SI L V+++ + L W +G N
Sbjct: 79 MLNAKWTVIL-SIVILIVFVVLLLLI--LHWTGVIGKRN 114
>Z74472-1|CAA98946.2| 118|Caenorhabditis elegans Hypothetical
protein F23H12.1 protein.
Length = 118
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/70 (28%), Positives = 45/70 (64%)
Frame = +1
Query: 445 ELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIKMYV 624
+++E+ ++M N++ + R +L L ++A+ L + ++ +SRTL++ +W+NI+M +
Sbjct: 40 QVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYWWQNIRMMI 99
Query: 625 ILVSIAALAV 654
I+ IA L +
Sbjct: 100 IIGLIAFLVI 109
>AF239889-1|AAF45301.1| 118|Caenorhabditis elegans
synaptobrevin-like protein protein.
Length = 118
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/70 (28%), Positives = 45/70 (64%)
Frame = +1
Query: 445 ELDELKNIMVKNIDNMAMRGEKLELLVNKADNLATSSVSYRATSRTLQRSLFWKNIKMYV 624
+++E+ ++M N++ + R +L L ++A+ L + ++ +SRTL++ +W+NI+M +
Sbjct: 40 QVNEVIDVMRNNVNKVMERDVQLNSLDHRAEVLQNGASQFQQSSRTLRQKYWWQNIRMMI 99
Query: 625 ILVSIAALAV 654
I+ IA L +
Sbjct: 100 IIGLIAFLVI 109
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 106 ATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFH 210
ATC G+ T V Q + I P + ++TYS G+ + H
Sbjct: 1175 ATCSGSSTAVGSQCIGVIVPTNAQVTYSDGSMVLH 1209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,500,877
Number of Sequences: 27780
Number of extensions: 335068
Number of successful extensions: 953
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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