Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19j23r
(853 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 50 3e-07
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 45 2e-05
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 38 0.002
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 35 0.017
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 33 0.039
SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 32 0.090
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo... 31 0.16
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 29 1.1
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 29 1.1
SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyc... 29 1.1
SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 28 1.5
SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces pomb... 28 1.5
SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9 |Sch... 26 5.9
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 26 5.9
SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 26 5.9
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 26 5.9
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 7.8
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 7.8
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 50.4 bits (115), Expect = 3e-07
Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 8/154 (5%)
Frame = -2
Query: 549 LVTWLSLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ-Y 373
+ TW L + T+L ++G D+ G G +P EL VRW + +F P + +
Sbjct: 602 MTTWEHLRGSIPTVLTNGISGMAFSGADVAGFFG---NPDAELFVRWYETAIFYPFFRAH 658
Query: 372 SFV------PWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTD 211
+ + PW + E + R+ + A S G P+ P + + P D
Sbjct: 659 AHIDTKRREPWLYGEPYTSLVRELLRIRYRLLPTWYTAFYNSHTHGFPILYPQFLMHPED 718
Query: 210 QDALAVWDEFLLGER-VLAAPVLQQGAVSRDVYL 112
++ A+ D+F +G+ +L PV +YL
Sbjct: 719 EEGFAIDDQFYVGDSGLLVKPVTHPSIDKITIYL 752
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 44.8 bits (101), Expect = 2e-05
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 6/139 (4%)
Frame = -2
Query: 540 WLSLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ----Y 373
W + + ++++L NL G +V D+ G YN + +EL RW+ F+P +
Sbjct: 677 WSDMVSSISSILTFNLLGIPMVGADVCG---YNGNTDEELCARWMALGAFLPFYRNHNSL 733
Query: 372 SFVPWDHDEEA--VEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDAL 199
+P + A E R + M + GTP+ P+++ P
Sbjct: 734 GSIPQEPFRWASVAEASRSAIEIRYSLLPYWYTLMHTASVDGTPMVRPLFFEFPKQISLA 793
Query: 198 AVWDEFLLGERVLAAPVLQ 142
+V +F++G +L +P L+
Sbjct: 794 SVDKQFMIGTALLISPALE 812
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 37.9 bits (84), Expect = 0.002
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 7/140 (5%)
Frame = -2
Query: 540 WLSLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP-------T 382
W ++ ++ ++ N+ G +V D+ G G ++ +EL RW+ F P
Sbjct: 652 WSNMFFSISGMIVFNMMGIPMVGADVCGFLGDSD---EELCSRWMAMGAFSPFYRNHNNI 708
Query: 381 LQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDA 202
Q S P+ A E R+ ++ M + Q GTP ++ P D
Sbjct: 709 YQISQEPYTWSSVA-EASRRAMYIRYSLLPYWYTIMAKASQDGTPALRALFVEFPNDPTL 767
Query: 201 LAVWDEFLLGERVLAAPVLQ 142
V +F++G+ +L PVL+
Sbjct: 768 ADVDRQFMVGDSLLVTPVLE 787
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 34.7 bits (76), Expect = 0.017
Identities = 40/155 (25%), Positives = 59/155 (38%), Gaps = 21/155 (13%)
Frame = -2
Query: 702 LTSPTLMLQNGTRQ------GSKILLIPTILTA*S--------STLANLVGLHRFQYRTA 565
L T++L NG G K++ IP LT + LAN Q+R A
Sbjct: 3 LPPKTIVLDNGAYHIKAGFAGGKVVEIPNCLTRSKDGNRLFLGNELANCNDFTTLQFRRA 62
Query: 564 TLISILVTWLSLATLVTTLLQMNLN-------GYTLVLPDMIGGNGYNESPSKELLVRWL 406
LV W S T V L+ N+ Y+L+L + E + +L+
Sbjct: 63 HEKGYLVHW-STETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEF 121
Query: 405 QANVFMPTLQYSFVPWDHDEEAVEICRKYTHLHAE 301
Q + ++P +PWDH + YT H E
Sbjct: 122 QFDAYLPCTPAELIPWDHGSFTMNQEDAYTGQHGE 156
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 33.5 bits (73), Expect = 0.039
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -1
Query: 733 WNNNGSLPGYIDFTNPDAAEWYTSRIQDLIDTYDIDSLKFDA 608
W ++G L +D + D + + + + LI YD D L+ DA
Sbjct: 189 WQDSGVLLADLDVESSDVSSYLSDHFKSLISKYDFDGLRIDA 230
>SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 995
Score = 32.3 bits (70), Expect = 0.090
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 7/140 (5%)
Frame = -2
Query: 540 WLSLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ----- 376
W ++ + L N+ G +V D+ G G + +EL RW+ F+P +
Sbjct: 674 WSNMIFSIPGALTFNMVGLPMVGADVCGFMGNTD---EELCSRWMALGAFLPFYRNHNSL 730
Query: 375 --YSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDA 202
S P+ E E R ++ M + +G P+ P+++ P +
Sbjct: 731 GSISQEPY-RWESVAESSRCAMNIRYSLLPYWYTLMYEASSQGLPLIRPLFFEFPNEPSL 789
Query: 201 LAVWDEFLLGERVLAAPVLQ 142
+F++G +L PVL+
Sbjct: 790 ANADRQFMVGSALLVTPVLE 809
>SPCC191.09c |gst1||glutathione S-transferase
Gst1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 229
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 763 NEEGNPESTWWNNNGSLPGYIDFTNPDAAEWYTSRIQ-DLIDTYDID 626
NE+ +PE N NG +P ID N D W + I L D YD +
Sbjct: 39 NEQKSPEHLALNPNGRVPTLIDHHNNDYTIWESDAILIYLADKYDTE 85
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +1
Query: 514 RDQRRETQPRDQDGDQCRRSVLESVETN*IRQRRTS 621
+D ET PR+ D+ SV E VE RQ+R S
Sbjct: 26 KDASVETTPRETSVDEDNTSVFEDVEAQDSRQKRFS 61
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -1
Query: 805 PWFSDALEK---GYLVLNEEGNPESTWWNNNGSLPGYIDFTNPDAAEWYTSRIQDLIDT- 638
P + +A K G VL+ +W+ N +P I +P A+W + + D DT
Sbjct: 298 PSYGEAFNKNGGGVFVLDWRSEGIRSWFFNRSEIPSDITSGSPQPAKW-SEPVADFPDTK 356
Query: 637 YDIDSL 620
DID +
Sbjct: 357 CDIDKM 362
>SPAC23D3.14c |aah2||alpha-amylase homolog Aah2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 581
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -1
Query: 763 NEEGNPESTWWNNNGSLPGYIDFTNPDAAEWYTSRIQDLIDTYDIDSLKFDA 608
N+ + ++ W + L +D N I++++ YDID ++FDA
Sbjct: 183 NDIESVQNCWLGDENLLLADVDTENEVVLSVLEKWIKNVVQEYDIDGIRFDA 234
>SPAC3F10.02c |trk1|sptrk|potassium ion transporter
Trk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 841
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 303 EYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEFLL-GERVLAAPVLQQGAVS 127
+Y D + A A+ Q G L+ D ++L++W +F+L G + P+ G++S
Sbjct: 48 KYIDALFLASSATTQTG---------LNSVDLNSLSIWQQFILYGFTAITVPIWMHGSIS 98
>SPBC1289.15 ||SPBC8E4.07c|glycoprotein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1283
Score = 28.3 bits (60), Expect = 1.5
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -2
Query: 777 ATLSSTKKATLNLPGGTTTALYPGTLTSPTLMLQNGTRQGSKILLIPT 634
AT +T ++L GTTT Y T + P NGT + L+IPT
Sbjct: 109 ATPQNTNTTQVSLTNGTTTNSYSNTNSLPITDTINGTTE----LIIPT 152
>SPAC1834.05 |alg9||mannosyltransferase complex subunit Alg9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 577
Score = 26.2 bits (55), Expect = 5.9
Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -1
Query: 742 STWWNNNG--SLPGYI-DFTNPDAAEWYTSRIQDLIDTYDIDSLKFDAGESSWS 590
STWWN G +P ++ +F N + + + D + + D K E +S
Sbjct: 463 STWWNREGYYQIPEHMNEFNNEEPTRYTSLESCDFLIDLEFDHSKATVNEPIYS 516
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -1
Query: 577 VQNGDIDLHPGHVVESRDVGHDSIANEP 494
+Q+GD+ +HP H+ S+ + S N P
Sbjct: 391 IQDGDLTMHPMHIRHSQSDFYPSGINTP 418
>SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 5.9
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = -2
Query: 393 FMPTLQYSFVPWDHDEEAVEICRKYTHLH 307
F+P + + + D E+A+++ + Y HLH
Sbjct: 856 FLPEIVRALLLLDKREQAIDLVKTYGHLH 884
>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 573
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 229 PDGRVHGSSFLDGRLHSGHDLISIFGVKMRVFAADFY 339
P+G+ H S + G +++ ++ +IFG M F DF+
Sbjct: 84 PNGKGHYPSGIRGLVNAASNIGNIFGQLMFGFMGDFF 120
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -2
Query: 747 LNLPGGTTTALYPGTLTSPTLMLQNGTRQGSKILLIPTILTA 622
L L G L P + SPT + G S L++PT ++A
Sbjct: 719 LRLQKGKNNILSPPSFQSPTALGDPGDNIASSPLILPTSVSA 760
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 25.8 bits (54), Expect = 7.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 162 LAAPVLQQGAVSRDVYLPRGSWRDGVTGELHQGPL 58
+AAP G VS + RG+W + H+GP+
Sbjct: 239 IAAPNAMNGPVSCVSIIERGTWTSEINLIGHEGPV 273
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,775,075
Number of Sequences: 5004
Number of extensions: 86219
Number of successful extensions: 268
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 267
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -