Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19j18r
(869 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein. 158 3e-38
AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protei... 158 3e-38
U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding pro... 156 1e-37
U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding... 156 1e-37
BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein. 156 1e-37
AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein... 156 1e-37
AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein... 156 1e-37
AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein... 156 1e-37
AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protei... 156 1e-37
AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein... 156 1e-37
AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein... 156 1e-37
AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein... 156 1e-37
AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant ... 156 1e-37
BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein. 155 1e-37
AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant ... 154 3e-37
Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for ... 149 1e-35
U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein p... 149 1e-35
BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein... 149 1e-35
BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein... 149 1e-35
BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein. 149 1e-35
Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding pro... 146 1e-34
DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein. 139 1e-32
BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein... 139 1e-32
BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein... 139 1e-32
AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein... 139 1e-32
AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific poly(A)... 137 6e-32
AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens ... 132 1e-30
AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open rea... 132 2e-30
AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open read... 132 2e-30
AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open read... 132 2e-30
AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open read... 119 1e-26
AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open read... 118 3e-26
AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open read... 118 3e-26
U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein. 67 7e-11
AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced prote... 67 7e-11
AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein. 67 7e-11
AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open read... 55 3e-07
AL359181-1|CAI96111.1| 1096|Homo sapiens PHD finger protein 2 pr... 38 0.047
AL353629-9|CAI96110.1| 1096|Homo sapiens PHD finger protein 2 pr... 38 0.047
AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein prot... 38 0.047
AB014562-1|BAA31637.2| 1114|Homo sapiens KIAA0662 protein protein. 38 0.047
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 36 0.25
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 36 0.25
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 36 0.25
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 36 0.25
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 36 0.25
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 36 0.25
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 36 0.25
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 36 0.25
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 36 0.25
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 36 0.25
BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating p... 35 0.33
AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein pr... 35 0.33
AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens ... 35 0.33
AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens ... 35 0.33
AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein. 35 0.33
BC045626-1|AAH45626.3| 471|Homo sapiens PBX/knotted 1 homeobox ... 33 1.0
AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK023136-1|BAB14422.1| 306|Homo sapiens protein ( Homo sapiens ... 33 1.3
AJ417081-1|CAD01142.1| 460|Homo sapiens PREP2 protein protein. 33 1.3
AB065001-1|BAB83665.1| 460|Homo sapiens PKNOX2 protein. 33 1.3
U34051-1|AAC50278.1| 367|Homo sapiens cyclin-dependent kinase 5... 33 1.8
DQ307839-1|ABB96255.1| 367|Homo sapiens cyclin-dependent kinase... 33 1.8
BC041771-1|AAH41771.1| 367|Homo sapiens cyclin-dependent kinase... 33 1.8
AC097468-1|AAX88916.1| 367|Homo sapiens unknown protein. 33 1.8
U13660-1|AAA57007.1| 501|Homo sapiens cartilage-derived morphog... 32 2.3
M81750-1|AAA69696.1| 407|Homo sapiens myeloid cell nuclear diff... 32 2.3
BC032319-1|AAH32319.1| 407|Homo sapiens myeloid cell nuclear di... 32 2.3
BC020715-1|AAH20715.1| 310|Homo sapiens Unknown (protein for IM... 32 2.3
AL513205-11|CAH73796.1| 407|Homo sapiens myeloid cell nuclear d... 32 2.3
X80915-1|CAA56874.1| 501|Homo sapiens Gdf5 protein. 31 4.1
BC032495-1|AAH32495.1| 501|Homo sapiens GDF5 protein protein. 31 4.1
AL121586-3|CAB89416.1| 501|Homo sapiens growth differentiation ... 31 4.1
BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein pr... 31 5.4
BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, ty... 31 5.4
AC112715-1|AAY14906.1| 588|Homo sapiens unknown protein. 31 5.4
AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collage... 31 5.4
AL591866-6|CAI16074.1| 405|Homo sapiens taste receptor, type 1,... 25 5.5
AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens ... 31 7.2
AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens ... 31 7.2
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 30 9.5
X64810-1|CAA46031.1| 753|Homo sapiens PC1/PC3 protein. 30 9.5
X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3... 30 9.5
M90753-1|AAA59918.1| 753|Homo sapiens PC1 protein. 30 9.5
BC130295-1|AAI30296.1| 753|Homo sapiens proprotein convertase s... 30 9.5
AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens ... 30 9.5
AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens ... 30 9.5
AB208874-1|BAD92111.1| 724|Homo sapiens proprotein convertase s... 30 9.5
>BC065540-1|AAH65540.1| 631|Homo sapiens PABPC4 protein protein.
Length = 631
Score = 158 bits (383), Expect = 3e-38
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 10/137 (7%)
Frame = -3
Query: 861 SLGARPITGQQGVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAV 712
S G T + GV A ++ P ++ P A YKY ++R+P APQPAV
Sbjct: 474 SRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAV 533
Query: 711 HIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHML 532
H+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHML
Sbjct: 534 HVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHML 593
Query: 531 EHAESLKAKVDEAVAVL 481
E ESL++KVDEAVAVL
Sbjct: 594 ESPESLRSKVDEAVAVL 610
>AL365277-15|CAI16425.1| 410|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 410
Score = 158 bits (383), Expect = 3e-38
Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 10/137 (7%)
Frame = -3
Query: 861 SLGARPITGQQGVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAV 712
S G T + GV A ++ P ++ P A YKY ++R+P APQPAV
Sbjct: 253 SRGLPTTTQRVGVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAV 312
Query: 711 HIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHML 532
H+QGQEPLT++MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHML
Sbjct: 313 HVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHML 372
Query: 531 EHAESLKAKVDEAVAVL 481
E ESL++KVDEAVAVL
Sbjct: 373 ESPESLRSKVDEAVAVL 389
>U75686-1|AAB97309.1| 644|Homo sapiens polyadenylate binding
protein protein.
Length = 644
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 498 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 557
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 558 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 617
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 618 EAVAVL 623
>U33818-1|AAC50350.1| 644|Homo sapiens inducible poly(A)-binding
protein protein.
Length = 644
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 498 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 557
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 558 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 617
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 618 EAVAVL 623
>BC094755-1|AAH94755.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 514 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 573
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 574 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 633
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 634 EAVAVL 639
>AL845289-3|CAI12300.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibletaining 6 protein.
Length = 644
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 498 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 557
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 558 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 617
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 618 EAVAVL 623
>AL845289-2|CAI12298.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleseudogene protein.
Length = 660
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 514 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 573
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 574 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 633
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 634 EAVAVL 639
>AL845289-1|CAI12299.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducibleeudogene protein.
Length = 615
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 469 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 528
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 529 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 588
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 589 EAVAVL 594
>AL365277-13|CAI16423.1| 194|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblela) protein.
Length = 194
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 52 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 111
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 112 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 171
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 172 EAVAVL 177
>AL365277-4|CAI16414.1| 644|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblepeptide, antigen CD29 includes
protein.
Length = 644
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 498 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 557
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 558 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 617
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 618 EAVAVL 623
>AL365277-3|CAI16412.1| 660|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (inducible) pseudogene protein.
Length = 660
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 514 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 573
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 574 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 633
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 634 EAVAVL 639
>AL365277-2|CAI16413.1| 615|Homo sapiens poly(A) binding protein,
cytoplasmic 4 (induciblely, member 5 protein.
Length = 615
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 469 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 528
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 529 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 588
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 589 EAVAVL 594
>AB208962-1|BAD92199.1| 358|Homo sapiens PABPC4 protein variant
protein.
Length = 358
Score = 156 bits (378), Expect = 1e-37
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 212 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 271
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 272 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 331
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 332 EAVAVL 337
>BC071591-1|AAH71591.1| 660|Homo sapiens PABPC4 protein protein.
Length = 660
Score = 155 bits (377), Expect = 1e-37
Identities = 83/126 (65%), Positives = 95/126 (75%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R P APQPAVH+QGQEPLT++
Sbjct: 514 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRGPHPAIQPLQAPQPAVHVQGQEPLTAS 573
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 574 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 633
Query: 498 EAVAVL 481
EAVAVL
Sbjct: 634 EAVAVL 639
>AK222917-1|BAD96637.1| 371|Homo sapiens PABPC4 protein variant
protein.
Length = 371
Score = 154 bits (374), Expect = 3e-37
Identities = 82/126 (65%), Positives = 95/126 (75%), Gaps = 10/126 (7%)
Frame = -3
Query: 828 GVAAAAASIRPPLVSQSSRP---ANYKYTPNMRNP-------PAPQPAVHIQGQEPLTST 679
GV A ++ P ++ P A YKY ++R+P APQPAVH+QGQEPLT++
Sbjct: 225 GVPTAVQNLAPRAAVAAAAPRAVAPYKYASSVRSPHPAIQPLQAPQPAVHVQGQEPLTAS 284
Query: 678 MLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVD 499
MLAAAP QEQKQMLGERLFPLIQ MH +LAGKITGMLLEIDNSELLHMLE ESL++KVD
Sbjct: 285 MLAAAPPQEQKQMLGERLFPLIQTMHSNLAGKITGMLLEIDNSELLHMLESPESLRSKVD 344
Query: 498 EAVAVL 481
EA AVL
Sbjct: 345 EAAAVL 350
>Y00345-1|CAA68428.1| 633|Homo sapiens protein ( Human mRNA for
polyA binding protein. ).
Length = 633
Score = 149 bits (361), Expect = 1e-35
Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 10/123 (8%)
Frame = -3
Query: 819 AAAASIRPPLVSQSSRPANYKYTPNMRNPPA----------PQPAVHIQGQEPLTSTMLA 670
AAAA+ P V + YKY +RNP QPAVH+QGQEPLT++MLA
Sbjct: 492 AAAAAAATPAVRTVPQ---YKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLA 548
Query: 669 AAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 490
+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAV
Sbjct: 549 SAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAV 608
Query: 489 AVL 481
AVL
Sbjct: 609 AVL 611
>U68104-1|AAD08718.1| 636|Homo sapiens poly(A)-binding protein
protein.
Length = 636
Score = 149 bits (361), Expect = 1e-35
Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 10/123 (8%)
Frame = -3
Query: 819 AAAASIRPPLVSQSSRPANYKYTPNMRNPPA----------PQPAVHIQGQEPLTSTMLA 670
AAAA+ P V + YKY +RNP QPAVH+QGQEPLT++MLA
Sbjct: 495 AAAAAAATPAVRTVPQ---YKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLA 551
Query: 669 AAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 490
+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAV
Sbjct: 552 SAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAV 611
Query: 489 AVL 481
AVL
Sbjct: 612 AVL 614
>BC041863-1|AAH41863.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 149 bits (361), Expect = 1e-35
Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 10/123 (8%)
Frame = -3
Query: 819 AAAASIRPPLVSQSSRPANYKYTPNMRNPPA----------PQPAVHIQGQEPLTSTMLA 670
AAAA+ P V + YKY +RNP QPAVH+QGQEPLT++MLA
Sbjct: 495 AAAAAAATPAVRTVPQ---YKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLA 551
Query: 669 AAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 490
+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAV
Sbjct: 552 SAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAV 611
Query: 489 AVL 481
AVL
Sbjct: 612 AVL 614
>BC023520-1|AAH23520.1| 636|Homo sapiens poly(A) binding protein,
cytoplasmic 1 protein.
Length = 636
Score = 149 bits (361), Expect = 1e-35
Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 10/123 (8%)
Frame = -3
Query: 819 AAAASIRPPLVSQSSRPANYKYTPNMRNPPA----------PQPAVHIQGQEPLTSTMLA 670
AAAA+ P V + YKY +RNP QPAVH+QGQEPLT++MLA
Sbjct: 495 AAAAAAATPAVRTVPQ---YKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLA 551
Query: 669 AAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 490
+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAV
Sbjct: 552 SAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAV 611
Query: 489 AVL 481
AVL
Sbjct: 612 AVL 614
>BC015958-1|AAH15958.1| 636|Homo sapiens PABPC1 protein protein.
Length = 636
Score = 149 bits (361), Expect = 1e-35
Identities = 82/123 (66%), Positives = 91/123 (73%), Gaps = 10/123 (8%)
Frame = -3
Query: 819 AAAASIRPPLVSQSSRPANYKYTPNMRNPPA----------PQPAVHIQGQEPLTSTMLA 670
AAAA+ P V + YKY +RNP QPAVH+QGQEPLT++MLA
Sbjct: 495 AAAAAAATPAVRTVPQ---YKYAAGVRNPQQHLNAQPQVTMQQPAVHVQGQEPLTASMLA 551
Query: 669 AAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAV 490
+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELLHMLE ESL++KVDEAV
Sbjct: 552 SAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAV 611
Query: 489 AVL 481
AVL
Sbjct: 612 AVL 614
>Z48501-1|CAA88401.1| 522|Homo sapiens polyadenylate binding
protein II protein.
Length = 522
Score = 146 bits (353), Expect = 1e-34
Identities = 70/82 (85%), Positives = 76/82 (92%)
Frame = -3
Query: 726 PQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSE 547
P PAVH+QGQEPLT++MLA+AP QEQKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSE
Sbjct: 419 PHPAVHVQGQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSE 478
Query: 546 LLHMLEHAESLKAKVDEAVAVL 481
LLHMLE ESL++KVDEAVAVL
Sbjct: 479 LLHMLESPESLRSKVDEAVAVL 500
>DQ120640-1|ABB92425.1| 630|Homo sapiens PABP3 protein.
Length = 630
Score = 139 bits (336), Expect = 1e-32
Identities = 80/124 (64%), Positives = 90/124 (72%), Gaps = 10/124 (8%)
Frame = -3
Query: 822 AAAAASIRPPLVSQSSRPANYKYTPNMRNPPA---PQP-------AVHIQGQEPLTSTML 673
AAAAA+ P V R YKY +RNP QP AVH+QGQE LT++ L
Sbjct: 489 AAAAAAAATPAVRTVPR---YKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETLTASRL 545
Query: 672 AAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEA 493
A+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEA
Sbjct: 546 ASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEA 605
Query: 492 VAVL 481
VAVL
Sbjct: 606 VAVL 609
>BC045608-1|AAH45608.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 139 bits (336), Expect = 1e-32
Identities = 80/124 (64%), Positives = 90/124 (72%), Gaps = 10/124 (8%)
Frame = -3
Query: 822 AAAAASIRPPLVSQSSRPANYKYTPNMRNPPA---PQP-------AVHIQGQEPLTSTML 673
AAAAA+ P V R YKY +RNP QP AVH+QGQE LT++ L
Sbjct: 489 AAAAAAAATPAVRTVPR---YKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETLTASRL 545
Query: 672 AAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEA 493
A+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEA
Sbjct: 546 ASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEA 605
Query: 492 VAVL 481
VAVL
Sbjct: 606 VAVL 609
>BC027617-1|AAH27617.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 139 bits (336), Expect = 1e-32
Identities = 80/124 (64%), Positives = 90/124 (72%), Gaps = 10/124 (8%)
Frame = -3
Query: 822 AAAAASIRPPLVSQSSRPANYKYTPNMRNPPA---PQP-------AVHIQGQEPLTSTML 673
AAAAA+ P V R YKY +RNP QP AVH+QGQE LT++ L
Sbjct: 489 AAAAAAAATPAVRTVPR---YKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETLTASRL 545
Query: 672 AAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEA 493
A+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEA
Sbjct: 546 ASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEA 605
Query: 492 VAVL 481
VAVL
Sbjct: 606 VAVL 609
>AL359757-1|CAH70805.1| 631|Homo sapiens poly(A) binding protein,
cytoplasmic 3 protein.
Length = 631
Score = 139 bits (336), Expect = 1e-32
Identities = 80/124 (64%), Positives = 90/124 (72%), Gaps = 10/124 (8%)
Frame = -3
Query: 822 AAAAASIRPPLVSQSSRPANYKYTPNMRNPPA---PQP-------AVHIQGQEPLTSTML 673
AAAAA+ P V R YKY +RNP QP AVH+QGQE LT++ L
Sbjct: 489 AAAAAAAATPAVRTVPR---YKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETLTASRL 545
Query: 672 AAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEA 493
A+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEA
Sbjct: 546 ASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEA 605
Query: 492 VAVL 481
VAVL
Sbjct: 606 VAVL 609
>AF132026-1|AAG38953.1| 631|Homo sapiens testis-specific
poly(A)-binding protein protein.
Length = 631
Score = 137 bits (331), Expect = 6e-32
Identities = 79/124 (63%), Positives = 89/124 (71%), Gaps = 10/124 (8%)
Frame = -3
Query: 822 AAAAASIRPPLVSQSSRPANYKYTPNMRNPPA---PQP-------AVHIQGQEPLTSTML 673
AAA A+ P V R YKY +RNP QP AVH+QGQE LT++ L
Sbjct: 489 AAARAAAATPAVRTVPR---YKYAAGVRNPQQHRNAQPQVTMQQLAVHVQGQETLTASRL 545
Query: 672 AAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEA 493
A+AP Q+QKQMLGERLFPLIQ MHP LAGKITGMLLEIDNSELL+MLE ESL++KVDEA
Sbjct: 546 ASAPPQKQKQMLGERLFPLIQAMHPTLAGKITGMLLEIDNSELLYMLESPESLRSKVDEA 605
Query: 492 VAVL 481
VAVL
Sbjct: 606 VAVL 609
>AK127880-1|BAC87174.1| 146|Homo sapiens protein ( Homo sapiens
cDNA FLJ45986 fis, clone PUAEN2000594, highly similar
to Polyadenylate-binding protein 1. ).
Length = 146
Score = 132 bits (320), Expect = 1e-30
Identities = 66/81 (81%), Positives = 73/81 (90%)
Frame = -3
Query: 723 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSEL 544
QPA+H+QGQEPLT +MLA+AP QEQKQMLGE LFPLIQ MHP LAGKITG+LLEIDNSEL
Sbjct: 45 QPAIHVQGQEPLTVSMLASAP-QEQKQMLGEWLFPLIQAMHPTLAGKITGVLLEIDNSEL 103
Query: 543 LHMLEHAESLKAKVDEAVAVL 481
LHML+ ESL +KVDEAVAVL
Sbjct: 104 LHMLKSPESLHSKVDEAVAVL 124
>AL109839-10|CAI95639.1| 168|Homo sapiens chromosome 20 open
reading frame 119 protein.
Length = 168
Score = 132 bits (318), Expect = 2e-30
Identities = 74/120 (61%), Positives = 83/120 (69%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAP 661
TG GV RP L + S A+ Y +PAVHI GQEPLT++MLAAAP
Sbjct: 43 TGPSGVGCCTPG-RPLLPCKCSSAAHSTYR-------VQEPAVHIPGQEPLTASMLAAAP 94
Query: 660 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 481
L EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK+DEAVAVL
Sbjct: 95 LHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL 154
>AL109839-1|CAI95631.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 132 bits (318), Expect = 2e-30
Identities = 74/120 (61%), Positives = 83/120 (69%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAP 661
TG GV RP L + S A+ Y +PAVHI GQEPLT++MLAAAP
Sbjct: 489 TGPSGVGCCTPG-RPLLPCKCSSAAHSTYR-------VQEPAVHIPGQEPLTASMLAAAP 540
Query: 660 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 481
L EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK+DEAVAVL
Sbjct: 541 LHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL 600
>AL008725-4|CAI95662.1| 614|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 614
Score = 132 bits (318), Expect = 2e-30
Identities = 74/120 (61%), Positives = 83/120 (69%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAP 661
TG GV RP L + S A+ Y +PAVHI GQEPLT++MLAAAP
Sbjct: 489 TGPSGVGCCTPG-RPLLPCKCSSAAHSTYR-------VQEPAVHIPGQEPLTASMLAAAP 540
Query: 660 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAVL 481
L EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK+DEAVAVL
Sbjct: 541 LHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKIDEAVAVL 600
>AL109839-8|CAI95637.1| 149|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 149
Score = 119 bits (287), Expect = 1e-26
Identities = 67/113 (59%), Positives = 76/113 (67%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAP 661
TG GV RP L + S A+ Y +PAVHI GQEPLT++MLAAAP
Sbjct: 43 TGPSGVGCCTPG-RPLLPCKCSSAAHSTYR-------VQEPAVHIPGQEPLTASMLAAAP 94
Query: 660 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKV 502
L EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK+
Sbjct: 95 LHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAKI 147
>AL109839-9|CAI95638.1| 171|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 171
Score = 118 bits (284), Expect = 3e-26
Identities = 67/112 (59%), Positives = 75/112 (66%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAP 661
TG GV RP L + S A+ Y +PAVHI GQEPLT++MLAAAP
Sbjct: 43 TGPSGVGCCTPG-RPLLPCKCSSAAHSTYR-------VQEPAVHIPGQEPLTASMLAAAP 94
Query: 660 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 505
L EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK
Sbjct: 95 LHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAK 146
>AL109839-7|CAI95636.1| 151|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 151
Score = 118 bits (284), Expect = 3e-26
Identities = 67/112 (59%), Positives = 75/112 (66%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAP 661
TG GV RP L + S A+ Y +PAVHI GQEPLT++MLAAAP
Sbjct: 24 TGPSGVGCCTPG-RPLLPCKCSSAAHSTYR-------VQEPAVHIPGQEPLTASMLAAAP 75
Query: 660 LQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 505
L EQKQM+GERL+PLI +H LAGKITGMLLEIDNSELL MLE ESL AK
Sbjct: 76 LHEQKQMIGERLYPLIHDVHTQLAGKITGMLLEIDNSELLLMLESPESLHAK 127
>U95000-1|AAF88143.1| 2798|Homo sapiens hyd protein protein.
Length = 2798
Score = 67.3 bits (157), Expect = 7e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -3
Query: 663 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 484
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ +
Sbjct: 2388 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMEL 2447
Query: 483 L 481
+
Sbjct: 2448 I 2448
>AF006010-1|AAD01259.2| 2799|Homo sapiens progestin induced protein
protein.
Length = 2799
Score = 67.3 bits (157), Expect = 7e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -3
Query: 663 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 484
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ +
Sbjct: 2389 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMEL 2448
Query: 483 L 481
+
Sbjct: 2449 I 2449
>AB020703-1|BAA74919.3| 2820|Homo sapiens KIAA0896 protein protein.
Length = 2820
Score = 67.3 bits (157), Expect = 7e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = -3
Query: 663 PLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAKVDEAVAV 484
PL +Q LGERL+P +Q M P A KITGMLLE+ ++LL +L +SL+A+VDEA+ +
Sbjct: 2411 PLPAHRQALGERLYPRVQAMQPAFASKITGMLLELSPAQLLLLLASEDSLRARVDEAMEL 2470
Query: 483 L 481
+
Sbjct: 2471 I 2471
>AL109839-6|CAI95635.1| 134|Homo sapiens chromosome 20 open reading
frame 119 protein.
Length = 134
Score = 55.2 bits (127), Expect = 3e-07
Identities = 24/30 (80%), Positives = 28/30 (93%)
Frame = -3
Query: 723 QPAVHIQGQEPLTSTMLAAAPLQEQKQMLG 634
+PAVHI GQEPLT++MLAAAPL EQKQM+G
Sbjct: 15 EPAVHIPGQEPLTASMLAAAPLHEQKQMIG 44
>AL359181-1|CAI96111.1| 1096|Homo sapiens PHD finger protein 2
protein.
Length = 1096
Score = 37.9 bits (84), Expect = 0.047
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQ--GQEPLTSTMLAA 667
T Q + + + P + +P+ P PP P + ++ G++ + +A
Sbjct: 479 TPPQSLLEKVSKKKTPKTVKMPKPSKIPKPPKPPKPPRPPKTLKLKDGGKKKGKKSRESA 538
Query: 666 APLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 505
+P +L + +M P GK T +L + N +++HM E L+ +
Sbjct: 539 SPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLSVPNKDVVHMQNDVERLEIR 592
>AL353629-9|CAI96110.1| 1096|Homo sapiens PHD finger protein 2
protein.
Length = 1096
Score = 37.9 bits (84), Expect = 0.047
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQ--GQEPLTSTMLAA 667
T Q + + + P + +P+ P PP P + ++ G++ + +A
Sbjct: 479 TPPQSLLEKVSKKKTPKTVKMPKPSKIPKPPKPPKPPRPPKTLKLKDGGKKKGKKSRESA 538
Query: 666 APLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 505
+P +L + +M P GK T +L + N +++HM E L+ +
Sbjct: 539 SPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLSVPNKDVVHMQNDVERLEIR 592
>AF043725-1|AAD21791.1| 1099|Homo sapiens PHD-finger protein
protein.
Length = 1099
Score = 37.9 bits (84), Expect = 0.047
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQ--GQEPLTSTMLAA 667
T Q + + + P + +P+ P PP P + ++ G++ + +A
Sbjct: 479 TPPQSLLEKVSKKKTPKTVKMPKPSKIPKPPKPPKPPRPPKTLKLKDGGKKKGKKSRESA 538
Query: 666 APLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 505
+P +L + +M P GK T +L + N +++HM E L+ +
Sbjct: 539 SPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLSVPNKDVVHMQNDVERLEIR 592
>AB014562-1|BAA31637.2| 1114|Homo sapiens KIAA0662 protein protein.
Length = 1114
Score = 37.9 bits (84), Expect = 0.047
Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = -3
Query: 840 TGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPAVHIQ--GQEPLTSTMLAA 667
T Q + + + P + +P+ P PP P + ++ G++ + +A
Sbjct: 492 TPPQSLLEKVSKKKTPKTVKMPKPSKIPKPPKPPKPPRPPKTLKLKDGGKKKGKKSRESA 551
Query: 666 APLQEQKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESLKAK 505
+P +L + +M P GK T +L + N +++HM E L+ +
Sbjct: 552 SPTIPNLDLLEAHTKEALTKMEPPKKGKATKSVLSVPNKDVVHMQNDVERLEIR 605
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 827 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 886
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 887 TSPAAAYP 894
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 559 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 618
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 619 TSPAAAYP 626
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 827 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 886
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 887 TSPAAAYP 894
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 559 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 618
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 619 TSPAAAYP 626
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 827 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 886
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 887 TSPAAAYP 894
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 256 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 315
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 316 TSPAAAYP 323
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 273 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 332
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 333 TSPAAAYP 340
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 273 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 332
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 333 TSPAAAYP 340
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 827 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 886
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 887 TSPAAAYP 894
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 35.5 bits (78), Expect = 0.25
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = -3
Query: 849 RPITGQQGVAAAAASIRPPLVSQS-SRPANYKYTPNMRNPPAPQ----PAVHIQGQEPLT 685
+P+TG G +A + +PPL Q P + + P +++P PQ P QGQ PL
Sbjct: 813 QPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLG 872
Query: 684 STMLAAAP 661
++ AA P
Sbjct: 873 TSPAAAYP 880
>BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating
protein 17 protein.
Length = 881
Score = 35.1 bits (77), Expect = 0.33
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 735 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 568
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 810 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 869
Query: 567 LEIDN 553
L+IDN
Sbjct: 870 LDIDN 874
>AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein
protein.
Length = 414
Score = 35.1 bits (77), Expect = 0.33
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 735 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 568
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 343 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 402
Query: 567 LEIDN 553
L+IDN
Sbjct: 403 LDIDN 407
>AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens
cDNA FLJ43368 fis, clone NT2RP8000483, moderately
similar to Rattus norvegicus mRNA for Nadrin E2. ).
Length = 608
Score = 35.1 bits (77), Expect = 0.33
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 735 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 568
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 537 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 596
Query: 567 LEIDN 553
L+IDN
Sbjct: 597 LDIDN 601
>AK023281-1|BAB14506.1| 726|Homo sapiens protein ( Homo sapiens
cDNA FLJ13219 fis, clone NT2RP4001849, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 726
Score = 35.1 bits (77), Expect = 0.33
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 735 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 568
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 655 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 714
Query: 567 LEIDN 553
L+IDN
Sbjct: 715 LDIDN 719
>AJ306731-1|CAC37948.1| 803|Homo sapiens RhoGAP protein protein.
Length = 803
Score = 35.1 bits (77), Expect = 0.33
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 735 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 568
PP PQP VH G LT+T A+ + + + E + MH D A K + G +L
Sbjct: 732 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSASKDVPGRIL 791
Query: 567 LEIDN 553
L+IDN
Sbjct: 792 LDIDN 796
>BC045626-1|AAH45626.3| 471|Homo sapiens PBX/knotted 1 homeobox 2
protein.
Length = 471
Score = 33.5 bits (73), Expect = 1.0
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = -3
Query: 819 AAAASIRPPLVSQSSRPANYKYTPNMR---NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQ 649
A+ A + +Q+ P Y+ +P M PP+ AVHI ST + +AP+ Q
Sbjct: 5 ASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAPIDPQ 64
Query: 648 KQMLGER 628
Q+ ++
Sbjct: 65 AQLEADK 71
>AK027567-1|BAB55203.1| 803|Homo sapiens protein ( Homo sapiens
cDNA FLJ14661 fis, clone NT2RP2002710, weakly similar to
SH3-BINDING PROTEIN 3BP-1. ).
Length = 803
Score = 33.5 bits (73), Expect = 1.0
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = -3
Query: 735 PPAPQP-AVHIQGQEPLTSTMLAAAPL-QEQKQMLGERLFPLIQRMHPDLAGK-ITG-ML 568
PP PQP VH G LT+T A+ + + + E + +H D A K + G +L
Sbjct: 732 PPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEVHSDSASKDVPGRIL 791
Query: 567 LEIDN 553
L+IDN
Sbjct: 792 LDIDN 796
>AK023136-1|BAB14422.1| 306|Homo sapiens protein ( Homo sapiens
cDNA FLJ13074 fis, clone NT2RP3001855, moderately
similar to HOMEOBOX PROTEIN PKNOX1. ).
Length = 306
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 792 LVSQSSRPANYKYTPNMR---NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGER 628
+ +Q+ P Y+ +P M PP+ AVHI ST + +AP+ Q Q+ ++
Sbjct: 2 MATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAPIDPQAQLEADK 59
>AJ417081-1|CAD01142.1| 460|Homo sapiens PREP2 protein protein.
Length = 460
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 792 LVSQSSRPANYKYTPNMR---NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGER 628
+ +Q+ P Y+ +P M PP+ AVHI ST + +AP+ Q Q+ ++
Sbjct: 2 MATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAPIDPQAQLEADK 59
>AB065001-1|BAB83665.1| 460|Homo sapiens PKNOX2 protein.
Length = 460
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 792 LVSQSSRPANYKYTPNMR---NPPAPQPAVHIQGQEPLTSTMLAAAPLQEQKQMLGER 628
+ +Q+ P Y+ +P M PP+ AVHI ST + +AP+ Q Q+ ++
Sbjct: 2 MATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSAAASTPVPSAPIDPQAQLEADK 59
>U34051-1|AAC50278.1| 367|Homo sapiens cyclin-dependent kinase 5
activator isoform p39i protein.
Length = 367
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = -3
Query: 825 VAAAAASIRPPLVSQSSR--PANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQE 652
V AAAA+ PP ++ P + P PPAPQ A + G P ++ A E
Sbjct: 128 VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP--RRVIVQASTGE 185
Query: 651 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELL 541
+ LG+ + R+ G++ G +D S LL
Sbjct: 186 LLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRSLLL 222
>DQ307839-1|ABB96255.1| 367|Homo sapiens cyclin-dependent kinase 5,
regulatory subunit 2 (p39) protein.
Length = 367
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = -3
Query: 825 VAAAAASIRPPLVSQSSR--PANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQE 652
V AAAA+ PP ++ P + P PPAPQ A + G P ++ A E
Sbjct: 128 VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP--RRVIVQASTGE 185
Query: 651 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELL 541
+ LG+ + R+ G++ G +D S LL
Sbjct: 186 LLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRSLLL 222
>BC041771-1|AAH41771.1| 367|Homo sapiens cyclin-dependent kinase 5,
regulatory subunit 2 (p39) protein.
Length = 367
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = -3
Query: 825 VAAAAASIRPPLVSQSSR--PANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQE 652
V AAAA+ PP ++ P + P PPAPQ A + G P ++ A E
Sbjct: 128 VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP--RRVIVQASTGE 185
Query: 651 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELL 541
+ LG+ + R+ G++ G +D S LL
Sbjct: 186 LLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRSLLL 222
>AC097468-1|AAX88916.1| 367|Homo sapiens unknown protein.
Length = 367
Score = 32.7 bits (71), Expect = 1.8
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = -3
Query: 825 VAAAAASIRPPLVSQSSR--PANYKYTPNMRNPPAPQPAVHIQGQEPLTSTMLAAAPLQE 652
V AAAA+ PP ++ P + P PPAPQ A + G P ++ A E
Sbjct: 128 VPAAAATCEPPSGGSAAAQPPGSGGGKPPPPPPPAPQVAPPVPGGSP--RRVIVQASTGE 185
Query: 651 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELL 541
+ LG+ + R+ G++ G +D S LL
Sbjct: 186 LLRCLGDFVCRRCYRLKELSPGELVGWFRGVDRSLLL 222
>U13660-1|AAA57007.1| 501|Homo sapiens cartilage-derived
morphogenetic protein 1 precursor protein.
Length = 501
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -3
Query: 858 LGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPA 727
LG RP + G+A A A RPPL RP + Y N A
Sbjct: 31 LGQRPQGSRPGLAKAEAKERPPLARNVFRPGGHSYGGGATNANA 74
>M81750-1|AAA69696.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -3
Query: 837 GQQGVAAAAASIRPPLV-SQSSRPANYKYTPNMRNPPAPQPAV--HIQGQEPLTSTML-A 670
G G + +AA PPL + SS P+N +TPN Q ++ +P+T +L A
Sbjct: 160 GPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKA 219
Query: 669 AAPLQEQKQMLGE 631
AP + + G+
Sbjct: 220 TAPFKYESPENGK 232
>BC032319-1|AAH32319.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -3
Query: 837 GQQGVAAAAASIRPPLV-SQSSRPANYKYTPNMRNPPAPQPAV--HIQGQEPLTSTML-A 670
G G + +AA PPL + SS P+N +TPN Q ++ +P+T +L A
Sbjct: 160 GPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKA 219
Query: 669 AAPLQEQKQMLGE 631
AP + + G+
Sbjct: 220 TAPFKYESPENGK 232
>BC020715-1|AAH20715.1| 310|Homo sapiens Unknown (protein for
IMAGE:4717988) protein.
Length = 310
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -3
Query: 837 GQQGVAAAAASIRPPLV-SQSSRPANYKYTPNMRNPPAPQPAV--HIQGQEPLTSTML-A 670
G G + +AA PPL + SS P+N +TPN Q ++ +P+T +L A
Sbjct: 160 GPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKA 219
Query: 669 AAPLQEQKQMLGE 631
AP + + G+
Sbjct: 220 TAPFKYESPENGK 232
>AL513205-11|CAH73796.1| 407|Homo sapiens myeloid cell nuclear
differentiation antigen protein.
Length = 407
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = -3
Query: 837 GQQGVAAAAASIRPPLV-SQSSRPANYKYTPNMRNPPAPQPAV--HIQGQEPLTSTML-A 670
G G + +AA PPL + SS P+N +TPN Q ++ +P+T +L A
Sbjct: 160 GPSGASTSAAVDHPPLPQTSSSTPSNTSFTPNQETQAQRQVDARRNVPQNDPVTVVVLKA 219
Query: 669 AAPLQEQKQMLGE 631
AP + + G+
Sbjct: 220 TAPFKYESPENGK 232
>X80915-1|CAA56874.1| 501|Homo sapiens Gdf5 protein.
Length = 501
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -3
Query: 858 LGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPA 727
LG RP + G+A A A RPPL RP + Y N A
Sbjct: 31 LGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSYGGGATNANA 74
>BC032495-1|AAH32495.1| 501|Homo sapiens GDF5 protein protein.
Length = 501
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -3
Query: 858 LGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPA 727
LG RP + G+A A A RPPL RP + Y N A
Sbjct: 31 LGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSYGGGATNANA 74
>AL121586-3|CAB89416.1| 501|Homo sapiens growth differentiation
factor 5 (cartilage-derived morphogenetic protein-1)
protein.
Length = 501
Score = 31.5 bits (68), Expect = 4.1
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -3
Query: 858 LGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPA 727
LG RP + G+A A A RPPL RP + Y N A
Sbjct: 31 LGQRPQGTRPGLAKAEAKERPPLARNVFRPGGHSYGGGATNANA 74
>BX641155-1|CAE46068.1| 558|Homo sapiens hypothetical protein
protein.
Length = 558
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 867 RTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPA 715
R + +P T + VAA A++RPP + +++P K P + P A +PA
Sbjct: 312 RPPVAVKPATAAKPVAAKPAAVRPP-AAAAAKPVATK--PEVPRPQAAKPA 359
>BC033174-1|AAH33174.1| 979|Homo sapiens Similar to collagen, type
VI, alpha 3 protein.
Length = 979
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 867 RTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPA 715
R + +P T + VAA A++RPP + +++P K P + P A +PA
Sbjct: 733 RPPVAVKPATAAKPVAAKPAAVRPP-AAAAAKPVATK--PEVPRPQAAKPA 780
>AC112715-1|AAY14906.1| 588|Homo sapiens unknown protein.
Length = 588
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 867 RTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPA 715
R + +P T + VAA A++RPP + +++P K P + P A +PA
Sbjct: 342 RPPVAVKPATAAKPVAAKPAAVRPP-AAAAAKPVATK--PEVPRPQAAKPA 389
>AB209636-1|BAD92873.1| 1702|Homo sapiens alpha 3 type VI collagen
isoform 5 precursor variant protein.
Length = 1702
Score = 31.1 bits (67), Expect = 5.4
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 867 RTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPA 715
R + +P T + VAA A++RPP + +++P K P + P A +PA
Sbjct: 1456 RPPVAVKPATAAKPVAAKPAAVRPP-AAAAAKPVATK--PEVPRPQAAKPA 1503
>AL591866-6|CAI16074.1| 405|Homo sapiens taste receptor, type 1,
member 1 protein.
Length = 405
Score = 25.0 bits (52), Expect(2) = 5.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Frame = -2
Query: 838 WTARSCCCCC 809
W CCCCC
Sbjct: 385 WQLTRCCCCC 394
Score = 24.6 bits (51), Expect(2) = 5.5
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -2
Query: 829 RSCCCCCI 806
R CCCCC+
Sbjct: 389 RCCCCCCL 396
>AK128229-1|BAC87339.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ46362 fis, clone TESTI4050293. ).
Length = 679
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 651 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 514
+ QML + L+QR H TGM L +DN +L HA+ +
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGI 494
>AK125938-1|BAC86351.1| 679|Homo sapiens protein ( Homo sapiens
cDNA FLJ43950 fis, clone TESTI4015293. ).
Length = 679
Score = 30.7 bits (66), Expect = 7.2
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -3
Query: 651 QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHAESL 514
+ QML + L+QR H TGM L +DN +L HA+ +
Sbjct: 451 KNQMLSQ--LKLVQRKHSQPQSHFTGMSLALDNLSSKDLLTHAQGI 494
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 30.3 bits (65), Expect = 9.5
Identities = 23/61 (37%), Positives = 31/61 (50%)
Frame = -2
Query: 802 SSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYYACSSTTPGTETDAWGTTV 623
+ST S S S + T PT+STTS+ RT ++ + S+TT T T GTT
Sbjct: 78 TSTTSASTTSTTSGAGTTPSPVPTTSTTSAPTTRTTSAPISSTTSATTTST-TSGPGTTP 136
Query: 622 S 620
S
Sbjct: 137 S 137
>X64810-1|CAA46031.1| 753|Homo sapiens PC1/PC3 protein.
Length = 753
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = -2
Query: 826 SCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAY-------PRTRTSDLYYACS 668
+C C S ++IS S SQ + +A+ SST +++Y R ++DL+ C+
Sbjct: 316 NCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSGGDYTDQRITSADLHNDCT 375
Query: 667 STTPGTETDA 638
T GT A
Sbjct: 376 ETHTGTSASA 385
>X52022-1|CAA36267.1| 3176|Homo sapiens collagen type VI, alpha 3
chain protein.
Length = 3176
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = -3
Query: 867 RTSLGARPITGQQGVAAAAASIRPPLVSQSSRPANYKYTPNMRNPPAPQPA 715
R + +P T + VAA A++RPP + +++P K P + P A +PA
Sbjct: 2931 RPPVAVKPATAAKPVAAKPAAVRPP--AAAAKPVATK--PEVPRPQAAKPA 2977
>M90753-1|AAA59918.1| 753|Homo sapiens PC1 protein.
Length = 753
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = -2
Query: 826 SCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAY-------PRTRTSDLYYACS 668
+C C S ++IS S SQ + +A+ SST +++Y R ++DL+ C+
Sbjct: 316 NCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCT 375
Query: 667 STTPGTETDA 638
T GT A
Sbjct: 376 ETHTGTSASA 385
>BC130295-1|AAI30296.1| 753|Homo sapiens proprotein convertase
subtilisin/kexin type 1 protein.
Length = 753
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = -2
Query: 826 SCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAY-------PRTRTSDLYYACS 668
+C C S ++IS S SQ + +A+ SST +++Y R ++DL+ C+
Sbjct: 316 NCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCT 375
Query: 667 STTPGTETDA 638
T GT A
Sbjct: 376 ETHTGTSASA 385
>AK128140-1|BAC87294.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ46261 fis, clone TESTI4025062. ).
Length = 280
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 826 SCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYYAC 671
S C C+ S T S S Y+ + TSST+S P +RTS ++Y+C
Sbjct: 121 STCYMCLSSGTSSTS---------YSSWSSQTSSTSSMCLP-SRTSSIFYSC 162
>AK125824-1|BAC86307.1| 280|Homo sapiens protein ( Homo sapiens
cDNA FLJ43836 fis, clone TESTI4005857. ).
Length = 280
Score = 30.3 bits (65), Expect = 9.5
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = -2
Query: 826 SCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAYPRTRTSDLYYAC 671
S C C+ S T S S Y+ + TSST+S P +RTS ++Y+C
Sbjct: 121 STCYMCLSSGTSSTS---------YSSWSSQTSSTSSMCLP-SRTSSIFYSC 162
>AB208874-1|BAD92111.1| 724|Homo sapiens proprotein convertase
subtilisin/kexin type 1 preproprotein variant protein.
Length = 724
Score = 30.3 bits (65), Expect = 9.5
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Frame = -2
Query: 826 SCCCCCIYSSTFSISKQSPSQL*IYTKHAQPTSSTTSSAY-------PRTRTSDLYYACS 668
+C C S ++IS S SQ + +A+ SST +++Y R ++DL+ C+
Sbjct: 287 NCDCDGYTDSIYTISISSASQQGLSPWYAEKCSSTLATSYSSGDYTDQRITSADLHNDCT 346
Query: 667 STTPGTETDA 638
T GT A
Sbjct: 347 ETHTGTSASA 356
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,807,297
Number of Sequences: 237096
Number of extensions: 2097423
Number of successful extensions: 7481
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 6798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7437
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11048563978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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