Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19j02r
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 362 e-100
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 362 e-100
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 362 e-100
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 104 7e-23
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 69 3e-12
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 61 1e-09
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 56 3e-08
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 56 3e-08
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 56 3e-08
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 56 3e-08
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 44 2e-04
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 44 2e-04
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.1
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 30 2.6
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 2.6
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 4.5
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 29 5.9
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 7.8
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 7.8
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 7.8
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 362 bits (890), Expect = e-100
Identities = 166/210 (79%), Positives = 186/210 (88%)
Frame = -1
Query: 891 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 712
LD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKS
Sbjct: 198 LDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKS 257
Query: 711 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 532
VEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPG
Sbjct: 258 VEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPG 317
Query: 531 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 352
QISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLC
Sbjct: 318 QISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLC 377
Query: 351 VESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
VESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 378 VESFTDYAPLGRFAVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 362 bits (890), Expect = e-100
Identities = 166/210 (79%), Positives = 186/210 (88%)
Frame = -1
Query: 891 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 712
LD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKS
Sbjct: 232 LDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKS 291
Query: 711 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 532
VEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPG
Sbjct: 292 VEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPG 351
Query: 531 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 352
QISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLC
Sbjct: 352 QISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLC 411
Query: 351 VESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
VESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 412 VESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 362 bits (890), Expect = e-100
Identities = 166/210 (79%), Positives = 186/210 (88%)
Frame = -1
Query: 891 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 712
LD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP N+TTEVKS
Sbjct: 232 LDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKS 291
Query: 711 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 532
VEMHHE+L EAVPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPG
Sbjct: 292 VEMHHESLPEAVPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPG 351
Query: 531 QISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLC 352
QISNGYTPVLDCHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLC
Sbjct: 352 QISNGYTPVLDCHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLC 411
Query: 351 VESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
VESF ++ PLGRFAVRDMRQTVAVGVIK+V
Sbjct: 412 VESFTDYAPLGRFAVRDMRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 104 bits (250), Expect = 7e-23
Identities = 64/212 (30%), Positives = 112/212 (52%), Gaps = 2/212 (0%)
Frame = -1
Query: 891 LDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVK 715
+D +LP R + P+R + + Y +GTV +G++E+G ++ G +V P +V
Sbjct: 325 IDVLLPSYKRDFNGPVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVL 382
Query: 714 SVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHP 535
+ + V GDN+ F +K + EL+ G++ S ++ K F A+V+VL H
Sbjct: 383 QIWADDVETERVVAGDNIKFKLKGIEENELQGGFII-CSPDSLAKTGRVFDAEVLVLEHR 441
Query: 534 GQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPL 355
I++GY+ VL +A + +D++TG+ K +K + I+ L +P
Sbjct: 442 SIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGEKKRA--KFVKQDEKCIMRLESPEPF 499
Query: 354 CVESFQEFPPLGRFAVRDMRQTVAVG-VIKAV 262
+E F+E+P LGRF +RD +T+A+G V+K V
Sbjct: 500 VLEPFKEYPYLGRFTLRDEGKTIAIGKVLKVV 531
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical protein
K07A12.4b protein.
Length = 592
Score = 69.3 bits (162), Expect = 3e-12
Identities = 44/211 (20%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Frame = -1
Query: 891 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 712
+D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ +++T
Sbjct: 379 IDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVK 437
Query: 711 VEMHHEALQEAVPGDNVGFNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHP 535
+++ + GD + ++ E ++ G V + + + F +++
Sbjct: 438 ECANNDGSRHCFAGDYILLTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIA 497
Query: 534 GQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPL 355
I G L H+ + C F + +++ G+ + P+ I G +A+V + +
Sbjct: 498 MPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDI 557
Query: 354 CVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
+E+F LGR R T+A G+++ V
Sbjct: 558 AIETFTSCRALGRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein
K07A12.4a protein.
Length = 610
Score = 69.3 bits (162), Expect = 3e-12
Identities = 44/211 (20%), Positives = 94/211 (44%), Gaps = 1/211 (0%)
Frame = -1
Query: 891 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKS 712
+D+ + P P+D PLR+ + DV K+ V G++E+G ++ V+ +++T
Sbjct: 397 IDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVK 455
Query: 711 VEMHHEALQEAVPGDNVGFNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHP 535
+++ + GD + ++ E ++ G V + + + F +++
Sbjct: 456 ECANNDGSRHCFAGDYILLTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIA 515
Query: 534 GQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPL 355
I G L H+ + C F + +++ G+ + P+ I G +A+V + +
Sbjct: 516 MPIIKGAKAELYAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDI 575
Query: 354 CVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
+E+F LGR R T+A G+++ V
Sbjct: 576 AIETFTSCRALGRVTFRAGGNTIAAGIVEKV 606
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 60.9 bits (141), Expect = 1e-09
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Frame = -1
Query: 852 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 685
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVG 431
Query: 684 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 505
G + F +K + K++R+G V D K P F A+++VL+HP I Y +
Sbjct: 432 IVKCGQSASFALKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAM 490
Query: 504 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIK 400
L + + ++V RTG +V K I+
Sbjct: 491 LHIGSVRQTATLVSMGKEV-LRTGDRDKVQFKFIR 524
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 56.4 bits (130), Expect = 3e-08
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = -1
Query: 852 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 685
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVG 432
Query: 684 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 505
G + F +K + K++R+G V D K P F A+++VL+HP I Y +
Sbjct: 433 IVKCGQSASFALKKIPKKDVRQGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAM 491
Query: 504 L 502
L
Sbjct: 492 L 492
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 56.0 bits (129), Expect = 3e-08
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Frame = -1
Query: 882 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV- 709
++P + ++P+ + VY I G GTV G++E G+LK G I + T VKSV
Sbjct: 242 VIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVI 300
Query: 708 ---EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 538
E + + +A PGD +G ++ + K++RRG V + + K AQ+ VL
Sbjct: 301 SGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE 359
Query: 537 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSK 361
TP+ + + H+ + +G S + K + G++A V L +
Sbjct: 360 --SEGGAKTPIANYFSEHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNS 409
Query: 360 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
+ +E P RF +R +T+ GV V
Sbjct: 410 QMFIE------PQQRFTIRKGAKTIGTGVFTDV 436
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 56.0 bits (129), Expect = 3e-08
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Frame = -1
Query: 882 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV- 709
++P + ++P+ + VY I G GTV G++E G+LK G I + T VKSV
Sbjct: 243 VIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVI 301
Query: 708 ---EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 538
E + + +A PGD +G ++ + K++RRG V + + K AQ+ VL
Sbjct: 302 SGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE 360
Query: 537 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSK 361
TP+ + + H+ + +G S + K + G++A V L +
Sbjct: 361 --SEGGAKTPIANYFSEHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNS 410
Query: 360 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
+ +E P RF +R +T+ GV V
Sbjct: 411 QMFIE------PQQRFTIRKGAKTIGTGVFTDV 437
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 56.0 bits (129), Expect = 3e-08
Identities = 56/213 (26%), Positives = 95/213 (44%), Gaps = 6/213 (2%)
Frame = -1
Query: 882 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVVFAPANITTEVKSV- 709
++P + ++P+ + VY I G GTV G++E G+LK G I + T VKSV
Sbjct: 243 VIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVI 301
Query: 708 ---EMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 538
E + + +A PGD +G ++ + K++RRG V + + K AQ+ VL
Sbjct: 302 SGLESFRKTVDQAEPGDQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE 360
Query: 537 PGQISNGYTPVLDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSK 361
TP+ + + H+ + +G S + K + G++A V L +
Sbjct: 361 --SEGGAKTPIANYFSEHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNS 410
Query: 360 PLCVESFQEFPPLGRFAVRDMRQTVAVGVIKAV 262
+ +E P RF +R +T+ GV V
Sbjct: 411 QMFIE------PQQRFTIRKGAKTIGTGVFTDV 437
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -1
Query: 891 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEV 718
LD++ P R +P+ I G GTV VG +E GVLK G V + T
Sbjct: 226 LDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTA 285
Query: 717 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 604
+++ ++++E GD+ G + V ++RG AG
Sbjct: 286 SDIQVFGKSVKEVRAGDHCGVLCRGVKGDTVKRGMWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 43.6 bits (98), Expect = 2e-04
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = -1
Query: 891 LDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEV 718
LD++ P R +P+ I G GTV VG +E GVLK G V + T
Sbjct: 226 LDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTA 285
Query: 717 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAG 604
+++ ++++E GD+ G + V ++RG AG
Sbjct: 286 SDIQVFGKSVKEVRAGDHCGVLCRGVKGDTVKRGMWAG 323
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = -1
Query: 852 PLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITT----EVKSVEMHHEALQ 685
P ++++Y + +G V G + G L G V+ P T V S+ +A+
Sbjct: 402 PAFFTIEELYNVPHVGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVG 461
Query: 684 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 538
PG+ ++ LRRG V + + PP +FTA +++L H
Sbjct: 462 CVNPGEAASISLNLPDGVSLRRGMVLAEIDHQPPV-CYEFTANLLLLCH 509
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = -1
Query: 882 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 703
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 191 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 250
Query: 702 HHEALQEAVPGDNVGFNV 649
+ + + G F V
Sbjct: 251 WKQRVGQVAAGARAAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 35.5 bits (78), Expect = 0.051
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = -1
Query: 882 ILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEM 703
I P R + + + + I G GTV G V GVL+ T + F N VK++E
Sbjct: 150 IFEPKRDEEGEFLIAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLET 209
Query: 702 HHEALQEAVPGDNVGFNV 649
+ + + G F V
Sbjct: 210 WKQRVGQVAAGARAAFLV 227
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +2
Query: 545 STMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPG-TASWRASWCISTDLT 721
ST T A+ + P ++ P + FT +S + S R S +S D T
Sbjct: 4 STATVAIIQSEPSTSSSSSPSSSRPEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDST 63
Query: 722 SVVMLAGAKTTMVPGFN--TPVSTLPTGTVPIPPILY 826
V + + VP + VST PT +PPI Y
Sbjct: 64 PVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPPITY 100
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.9 bits (64), Expect = 2.6
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +2
Query: 536 GWLSTMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASW---CI 706
G ST T A S AP GGLF + T P + T F T +P T
Sbjct: 446 GASSTTTPA--STAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503
Query: 707 STDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIP 814
+T + L +T+ + P +T T T+P P
Sbjct: 504 TTTPATAATLGQTPSTVSATPSLPTTTSTTSTLPKP 539
Score = 28.7 bits (61), Expect = 5.9
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = +2
Query: 554 T*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVM 733
T A +AAP GGLF + T P T F T +P TA+ + T +
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAATLGQTPSTVSATPSLP 527
Query: 734 LAGAKTTMVPGFNTPVSTLPT 796
+ T+ +P P PT
Sbjct: 528 TTTSTTSTLP---KPAEATPT 545
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 768 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 643
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 146 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 301
M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 200 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 352
+P+V + L PPP L +LM P TV + R K P G NS K T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 121 KRATNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 14
KR NS++F I+ C + F Y++ + +C
Sbjct: 262 KRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 802
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 803 VPIPPILYTSCRGRRRGL 856
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 802
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 803 VPIPPILYTSCRGRRRGL 856
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 28.7 bits (61), Expect = 5.9
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 NSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVMLAGAKTTMVPGFNTPVSTLPT-GT 802
++ T T T T +PGT + +T S GA TT PG V+ PT G
Sbjct: 2017 SNFTTTTTTSTTTTTPGTGPTVTAAQTTTTTPST---PGAGTTGTPGTGPTVTAAPTNGI 2073
Query: 803 VPIPPILYTSCRGRRRGL 856
PI+ T+ RG+
Sbjct: 2074 STTQPIITTTKGAEGRGV 2091
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 504 LDCHTAHIACKFAEIKEKVDRRTGKSTE 421
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 504 LDCHTAHIACKFAEIKEKVDRRTGKSTE 421
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 504 LDCHTAHIACKFAEIKEKVDRRTGKSTE 421
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,228,635
Number of Sequences: 27780
Number of extensions: 474898
Number of successful extensions: 1475
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1465
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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