Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19i20f
         (313 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015233-1|AAT94462.1|  158|Drosophila melanogaster RE06269p pro...    27   4.9  
AE014298-1335|AAN09252.2|  158|Drosophila melanogaster CG15316-P...    27   4.9  
AE014298-1334|AAF46497.3|  158|Drosophila melanogaster CG15316-P...    27   4.9  
AY060892-1|AAL28440.1|  321|Drosophila melanogaster GM04669p pro...    26   8.5  
AE013599-2730|AAF57667.1|  321|Drosophila melanogaster CG5335-PA...    26   8.5  

>BT015233-1|AAT94462.1|  158|Drosophila melanogaster RE06269p
           protein.
          Length = 158

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 227 SLKKIFTYFIKLFIIIFRSKILFILIK 307
           +L K FTY+   FII FRS   +I I+
Sbjct: 6   ALFKCFTYYNTKFIIAFRSTSFYISIR 32


>AE014298-1335|AAN09252.2|  158|Drosophila melanogaster CG15316-PB,
           isoform B protein.
          Length = 158

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 227 SLKKIFTYFIKLFIIIFRSKILFILIK 307
           +L K FTY+   FII FRS   +I I+
Sbjct: 6   ALFKCFTYYNTKFIIAFRSTSFYISIR 32


>AE014298-1334|AAF46497.3|  158|Drosophila melanogaster CG15316-PA,
           isoform A protein.
          Length = 158

 Score = 27.1 bits (57), Expect = 4.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +2

Query: 227 SLKKIFTYFIKLFIIIFRSKILFILIK 307
           +L K FTY+   FII FRS   +I I+
Sbjct: 6   ALFKCFTYYNTKFIIAFRSTSFYISIR 32


>AY060892-1|AAL28440.1|  321|Drosophila melanogaster GM04669p
           protein.
          Length = 321

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 15  FNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFFY 143
           F  E R GGF  +F  ++   L      V+  + GYN  FF Y
Sbjct: 228 FGSEERHGGFPFVFNQQFKLALAFTEREVLTAVDGYN--FFSY 268


>AE013599-2730|AAF57667.1|  321|Drosophila melanogaster CG5335-PA
           protein.
          Length = 321

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 15  FNIEYRRGGFALIFLAEYSSILFIRMILVIINMGGYNLRFFFY 143
           F  E R GGF  +F  ++   L      V+  + GYN  FF Y
Sbjct: 228 FGSEERHGGFPFVFNQQFKLALAFTEREVLTAVDGYN--FFSY 268


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,310,344
Number of Sequences: 53049
Number of extensions: 84070
Number of successful extensions: 128
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 610819518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)