Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19i19f
         (760 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p pro...   178   6e-45
AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-P...   178   6e-45

>AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p
           protein.
          Length = 337

 Score =  178 bits (434), Expect = 6e-45
 Identities = 87/138 (63%), Positives = 106/138 (76%), Gaps = 5/138 (3%)
 Frame = +3

Query: 354 IILFSDNVSVEFYGNDTPEFKGIKEGRMYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVT 533
           I+L SD+VS+EF G D P FKG K GR+YLT+HRMI+NSKK++D+M+SFS PF+AL DV 
Sbjct: 20  ILLHSDSVSMEFSGQDNPIFKGSKGGRIYLTSHRMIFNSKKSSDSMQSFSAPFVALSDVE 79

Query: 534 VEQPMFSANCIKGKVRAQPNGNFIGEVKFKLTFKSGGAIEYGQAMLKAAHLA----SRHM 701
           +EQP+F AN IKGKVRAQPNGN++GEVKFKL FK+GGAIEYGQA+L++A  A     R  
Sbjct: 80  IEQPVFGANYIKGKVRAQPNGNYVGEVKFKLHFKAGGAIEYGQALLRSAKTAMNNYHRGG 139

Query: 702 AAGASPPPLYPT-DWTVA 752
            AG  PPP  P   W  A
Sbjct: 140 LAGDDPPPYQPAGSWNEA 157



 Score = 37.1 bits (82), Expect = 0.026
 Identities = 15/19 (78%), Positives = 19/19 (100%)
 Frame = +3

Query: 138 MSLNTAHADHGVLIHAGEW 194
           MS+NTAHA++GVLIHAGE+
Sbjct: 1   MSVNTAHANNGVLIHAGEY 19


>AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-PA
           protein.
          Length = 427

 Score =  178 bits (434), Expect = 6e-45
 Identities = 87/138 (63%), Positives = 106/138 (76%), Gaps = 5/138 (3%)
 Frame = +3

Query: 354 IILFSDNVSVEFYGNDTPEFKGIKEGRMYLTTHRMIYNSKKNTDAMRSFSFPFIALQDVT 533
           I+L SD+VS+EF G D P FKG K GR+YLT+HRMI+NSKK++D+M+SFS PF+AL DV 
Sbjct: 20  ILLHSDSVSMEFSGQDNPIFKGSKGGRIYLTSHRMIFNSKKSSDSMQSFSAPFVALSDVE 79

Query: 534 VEQPMFSANCIKGKVRAQPNGNFIGEVKFKLTFKSGGAIEYGQAMLKAAHLA----SRHM 701
           +EQP+F AN IKGKVRAQPNGN++GEVKFKL FK+GGAIEYGQA+L++A  A     R  
Sbjct: 80  IEQPVFGANYIKGKVRAQPNGNYVGEVKFKLHFKAGGAIEYGQALLRSAKTAMNNYHRGG 139

Query: 702 AAGASPPPLYPT-DWTVA 752
            AG  PPP  P   W  A
Sbjct: 140 LAGDDPPPYQPAGSWNEA 157



 Score = 37.1 bits (82), Expect = 0.026
 Identities = 15/19 (78%), Positives = 19/19 (100%)
 Frame = +3

Query: 138 MSLNTAHADHGVLIHAGEW 194
           MS+NTAHA++GVLIHAGE+
Sbjct: 1   MSVNTAHANNGVLIHAGEY 19


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,302,601
Number of Sequences: 53049
Number of extensions: 590464
Number of successful extensions: 1118
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)