Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19i15f
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0470 + 34164873-34165856,34166335-34166568,34166680-341670... 110 1e-24
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 41 0.001
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 40 0.002
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 39 0.005
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 38 0.006
08_02_0009 + 11216532-11218687,11220727-11225998 38 0.006
08_02_0003 + 11180421-11180757,11180773-11185715 38 0.006
08_02_0002 + 11173365-11173512,11173528-11178470 38 0.008
11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,952... 38 0.011
08_02_1605 - 28166338-28166418,28166496-28166567,28166655-281667... 31 0.73
06_01_0692 - 5047162-5047441,5047602-5047726,5048257-5048327,504... 29 3.9
04_03_0041 + 10046063-10046170,10046284-10046742 29 3.9
01_01_0431 + 3271839-3273192,3273481-3275148,3275346-3275416 29 3.9
12_01_0612 - 5044639-5044858,5045010-5045167,5045440-5045684,504... 29 5.1
11_01_0298 - 2231063-2232015,2232124-2232798,2232918-2232946,223... 28 6.8
04_04_0852 + 28724891-28725184,28725683-28725801,28726868-28727294 28 6.8
02_05_1091 + 34044999-34045082,34046848-34047048,34047312-340475... 28 6.8
06_03_1056 + 27239176-27242361 28 9.0
01_06_1629 - 38749184-38749303,38749389-38749479,38749555-387496... 28 9.0
01_06_0147 + 26997641-26997688,26997783-26997857,26997966-269980... 28 9.0
01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,266... 28 9.0
>03_06_0470 +
34164873-34165856,34166335-34166568,34166680-34167006,
34168426-34168716
Length = 611
Score = 110 bits (265), Expect = 1e-24
Identities = 73/232 (31%), Positives = 110/232 (47%), Gaps = 24/232 (10%)
Frame = +3
Query: 105 PLDPSSFSRPEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESI 284
P+DP S++ + V L+ +DF ++ SA L + GD++LD+ L + S
Sbjct: 3 PVDPHSYTDGDHPVTAKAALAFYLDFAASTIHASALLTLSAPHS-GDLLLDTRALAVHSA 61
Query: 285 ELDG---AQLTYKLDDPV-PNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQP 452
+ + + L D P GS LT+ LP D + ++TSPSA+ALQWL P
Sbjct: 62 STASGPPSPIPFSLADAADPVLGSALTLTLPP-----DTTSFLLTFSTSPSASALQWLSP 116
Query: 453 AQTSGKKHPYLFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVLMSALRGESRST 632
QT+ P++FSQCQ IHARS+ PC DTP + T+D + P + + + +A R
Sbjct: 117 PQTASSL-PFVFSQCQSIHARSVFPCHDTPAARITFDLLLNVPTQLSAVAAARHVSRRDP 175
Query: 633 KTT--------------------FNQPMPLPSYLLAIAVGVLEHRTLGPRSK 728
+ F +P YL A A G + R LGPR++
Sbjct: 176 LPSDHRGACDDALWCAPGRIVEEFQMEQSVPPYLFAFAAGGIGFRDLGPRTR 227
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 40.7 bits (91), Expect = 0.001
Identities = 47/201 (23%), Positives = 82/201 (40%), Gaps = 10/201 (4%)
Frame = +3
Query: 132 PEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIE--SIELDG--- 296
P A + L L D + V G A++ VDV +VL++++L ++ SI G
Sbjct: 21 PRFAAPRRYELRLRPDLDACVFTGDASVVVDVSAPTRFLVLNAADLAVDRASIRFQGLAP 80
Query: 297 AQLTYKLDDPVPNYGSKLTIQLPKRASSGDK-LKIKIKYTTSPSATALQWLQPAQTSGKK 473
+++ DD + L ++ G+ L + T + + + G+
Sbjct: 81 TEVSLFEDDEI------LVLEFDGELPLGEGVLAMDFNGTLNDQMRGF-YRSKYEYKGET 133
Query: 474 HPYLFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVLMS---ALRGESRSTKTTF 644
+Q + + AR PC D P K + + P E L + A + KT
Sbjct: 134 KNMAVTQFEAVDARRCFPCWDEPAFKAKFKLTLEVPSELVALSNMPVACETIAGPIKTIH 193
Query: 645 NQPMPLPS-YLLAIAVGVLEH 704
+ PL S YL+AI VG+ ++
Sbjct: 194 YEESPLMSTYLVAIVVGLFDY 214
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 39.9 bits (89), Expect = 0.002
Identities = 50/207 (24%), Positives = 83/207 (40%), Gaps = 16/207 (7%)
Frame = +3
Query: 132 PEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIE----------- 278
P A + L L D + GS + VDV +VL+++EL +
Sbjct: 18 PGFAAPRRYDLRLVPDLDGCAFTGSVDVSVDVTAPTRFLVLNAAELEVSPGGVQFKPHGA 77
Query: 279 SIELDGAQLTYKLDDPVPNYGSKLTIQLPKRASSGD-KLKIKIKYTTSPSATALQWLQPA 455
EL A++T +D + L I+ + G+ L I K T + +
Sbjct: 78 EQELHPAEVTNVPEDEI------LIIRFNEVLPVGEGTLVIAFKGTLNDKMHGF-YRSVY 130
Query: 456 QTSGKKHPYLFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVLMSALRGESRST- 632
+ +G+K +Q +P AR PC D P K + + P E L + E +
Sbjct: 131 ELNGEKKNMAVTQFEPADARRCFPCWDEPSFKAIFKITLEVPSETVALSNMPVVEEKVNG 190
Query: 633 --KTTFNQPMPLPS-YLLAIAVGVLEH 704
K + Q P+ S YL+A+ VG+ ++
Sbjct: 191 LIKAVYFQETPIMSTYLVAVIVGMFDY 217
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 38.7 bits (86), Expect = 0.005
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 5/186 (2%)
Frame = +3
Query: 162 LSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIE-SIELDGAQLTYKLDDPVPNY 338
L L D +GSA + V V +VL+++EL ++ S +L +++ +D +
Sbjct: 25 LRLRPDLAACAFSGSAAVAVAVSAPTRFLVLNAAELAVDGSSDLVPSEVVQFEEDEIVVI 84
Query: 339 GSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQPIHARS 518
G + + + LK+ T + + + G+ +Q + AR
Sbjct: 85 GFGQDLPIGEGV-----LKMDFTGTLNDQMRGF-YRSKYEYKGESRNMAVTQFEAADARR 138
Query: 519 ILPCQDTPFVKFTYDAEVTAPEEFTVL--MSALRGESRS-TKTTFNQPMPLPS-YLLAIA 686
PC D P K + + P E L M ++ KT + + PL S YL+AI
Sbjct: 139 CFPCWDEPAFKAKFKLTLEVPSELVALSNMPVIKETVHGPLKTVYYEESPLMSTYLVAIV 198
Query: 687 VGVLEH 704
VG+ ++
Sbjct: 199 VGLFDY 204
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 38.3 bits (85), Expect = 0.006
Identities = 46/201 (22%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Frame = +3
Query: 132 PEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIE--SIELDG--- 296
P A + L L D V +G A++ VDV +VL++++L ++ SI G
Sbjct: 15 PRFAAPRRYELRLRPDLAACVFSGEASVAVDVSAPTRFLVLNAADLAVDRASIRFQGLAP 74
Query: 297 AQLTYKLDDPVPNYGSKLTIQLPKRASSGDK-LKIKIKYTTSPSATALQWLQPAQTSGKK 473
A+++ +D + L ++ G+ L ++ T + + + G+
Sbjct: 75 AEVSVFEEDEI------LVLEFAGELPLGEGVLAMRFNGTLNDQMRGF-YRSKYEYKGET 127
Query: 474 HPYLFSQCQPIHARSILPCQDTPFVKFTYDAEVTAPEEFTVLMS-ALRGE--SRSTKTTF 644
+Q + + AR PC D P K + + P E L + + E + KT
Sbjct: 128 KNMAVTQFESVDARRCFPCWDEPSFKAKFKLTLEVPSELVALSNMPIVNEKIAGPIKTVE 187
Query: 645 NQPMPLPS-YLLAIAVGVLEH 704
+ P+ S YL+AI VG+ ++
Sbjct: 188 YEESPVMSTYLVAIVVGLFDY 208
>08_02_0009 + 11216532-11218687,11220727-11225998
Length = 2475
Score = 38.3 bits (85), Expect = 0.006
Identities = 28/121 (23%), Positives = 53/121 (43%)
Frame = +3
Query: 144 VIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDD 323
V+++ L V+ EN N D+ L + D+ + + +++ +L D
Sbjct: 1676 VLENRLNKLEVELENLKNN----CDIKALPENKDIQNTEFKEQLITLKDSNTAKIIQLRD 1731
Query: 324 PVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQP 503
+ N+G+K ++LP + G ++ +KIK T S L + T H F++C
Sbjct: 1732 AITNFGNKYIVRLPFKEILGIRIPVKIKLTPKVSYKILALVDTGCTKNIIHDKYFTRCPE 1791
Query: 504 I 506
I
Sbjct: 1792 I 1792
>08_02_0003 + 11180421-11180757,11180773-11185715
Length = 1759
Score = 38.3 bits (85), Expect = 0.006
Identities = 28/121 (23%), Positives = 53/121 (43%)
Frame = +3
Query: 144 VIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDD 323
V+++ L V+ EN N D+ L + D+ + + +++ +L D
Sbjct: 960 VLENRLNKLEVELENLKNN----CDIKALPENKDIQNTEFKEQLITLKDSNTAKIIQLRD 1015
Query: 324 PVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQP 503
+ N+G+K ++LP + G ++ +KIK T S L + T H F++C
Sbjct: 1016 AITNFGNKYIVRLPFKEILGIRIPVKIKLTPKVSYKILALVDTGCTKNIIHDKYFTRCPE 1075
Query: 504 I 506
I
Sbjct: 1076 I 1076
>08_02_0002 + 11173365-11173512,11173528-11178470
Length = 1696
Score = 37.9 bits (84), Expect = 0.008
Identities = 28/121 (23%), Positives = 53/121 (43%)
Frame = +3
Query: 144 VIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDD 323
V+++ L V+ EN N D+ L + D+ + + +++ +L D
Sbjct: 897 VLENRLNKLEVELENLKNN----CDIKALPENKDIQNTEFKEQLITLKDSNTVKIIQLRD 952
Query: 324 PVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQP 503
+ N+G+K ++LP + G ++ +KIK T S L + T H F++C
Sbjct: 953 AITNFGNKYIVRLPFKEILGIRIPVKIKLTPKVSYKILALVDTGCTKNIIHDKYFTRCPE 1012
Query: 504 I 506
I
Sbjct: 1013 I 1013
>11_03_0065 - 9522478-9525335,9525513-9526028,9526432-9527247,
9527440-9527767
Length = 1505
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/121 (21%), Positives = 53/121 (43%)
Frame = +3
Query: 144 VIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDD 323
V+++ L ++ EN N D+ L + D+ + + +++ +L D
Sbjct: 711 VLENRLNKLEIELENLKNN----CDIKALPENKDIQNTEFKEQLITLKDSNTAKIIQLRD 766
Query: 324 PVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKKHPYLFSQCQP 503
+ N+G+K ++LP + G ++ +K+K T S L + T H F++C
Sbjct: 767 AITNFGNKYIVRLPFKEILGIRIPVKVKLTPKVSYKILALVDTGCTKNIIHDKYFTRCPE 826
Query: 504 I 506
I
Sbjct: 827 I 827
>08_02_1605 -
28166338-28166418,28166496-28166567,28166655-28166771,
28166846-28166956,28167077-28167252,28167340-28167421,
28167662-28167808,28167887-28168252,28168558-28168741,
28169104-28169213,28169452-28169508,28169589-28169600,
28169899-28169961,28170010-28170057,28170166-28170246,
28170326-28170389,28170661-28170686,28170782-28170868,
28170942-28170969,28171194-28171255,28171364-28171576,
28171667-28171774,28171948-28172022,28172136-28172249,
28172597-28172644,28172688-28172767,28172974-28173049,
28173287-28173427,28173685-28173762,28175100-28175204,
28177061-28177147,28177287-28178579
Length = 1463
Score = 31.5 bits (68), Expect = 0.73
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +3
Query: 489 SQCQPIHARSILPCQDTPFVKFTYDAEVTAPEE-FTVLMS----ALRGESRSTK--TTFN 647
+QC+ R I QD P V TY + A + + VL+S +G+ K +
Sbjct: 685 TQCEAEGFRKITYFQDRPDVMATYTCRIEADKTLYPVLLSNGNLIEQGDLEGGKHYALWE 744
Query: 648 QPMPLPSYLLAIAVGVLEHR 707
P PSYL A+ G L+ R
Sbjct: 745 DPFKKPSYLFALVAGQLDCR 764
>06_01_0692 -
5047162-5047441,5047602-5047726,5048257-5048327,
5048453-5048834,5049389-5050126
Length = 531
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +3
Query: 330 PNYGSKL-TIQLPKRASSGDKLKIKIKYTTSPSATALQWLQ 449
P YG+ + T+ +PK+ SS K K+ + SA A WL+
Sbjct: 328 PEYGNGVSTVSVPKQYSSTTKTSSGNKFQSVSSARAAPWLE 368
>04_03_0041 + 10046063-10046170,10046284-10046742
Length = 188
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = +3
Query: 333 NYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGK 470
NY L+IQL AS G +K+K Y S +A +PA + K
Sbjct: 71 NYKKMLSIQLRGFASKGKLVKVKASYKLSDAAKDSPKAKPAAPAPK 116
>01_01_0431 + 3271839-3273192,3273481-3275148,3275346-3275416
Length = 1030
Score = 29.1 bits (62), Expect = 3.9
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +3
Query: 120 SFSRPEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSELT--IESIELD 293
S S P + I ++ N++F N LNG+ + L + + LDS++L+ +E I +
Sbjct: 425 SMSGPIPSWIGNLIQLNNLNFRNNNLNGTIPKSIFALPALQSLYLDSNQLSGHLEDIPVP 484
Query: 294 GAQLTYKLD 320
+ Y +D
Sbjct: 485 LSSSVYDID 493
>12_01_0612 -
5044639-5044858,5045010-5045167,5045440-5045684,
5046006-5046294,5047540-5048561,5049320-5049389
Length = 667
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 360 LPKRASSGDKLKIKIKYTTSPSATALQWLQPAQTSGKK 473
LP+ + KL+ T+P A LQW+ +++SG +
Sbjct: 93 LPQNKHTETKLQAPCPVVTAPLANGLQWVPKSRSSGSE 130
>11_01_0298 -
2231063-2232015,2232124-2232798,2232918-2232946,
2233053-2233513,2233593-2233717,2233801-2234098,
2235004-2236234,2236562-2237233,2237329-2238539
Length = 1884
Score = 28.3 bits (60), Expect = 6.8
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +3
Query: 210 TLDVDVLQDIGDVVLDSSELTIESIELDG--AQLTYKLDDPV-PNYGSKLTIQLPKRASS 380
TL + +LQ + D V+DS EL E E +G ++ Y++D GS+ + +A +
Sbjct: 453 TLKLRILQLLCDHVIDSEELKTELEEREGYSEEMEYEMDSSTFAEVGSRSVLTRGSKAPA 512
Query: 381 GDKL 392
KL
Sbjct: 513 CKKL 516
>04_04_0852 + 28724891-28725184,28725683-28725801,28726868-28727294
Length = 279
Score = 28.3 bits (60), Expect = 6.8
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = -3
Query: 248 HVSDILEHVNVESGGSV*DFVFKIHVQR*SHVFYYSLFRPRK--GRRIQRTESTHDWNLT 75
HV+ + + +E G + DF F S F L RP K GRR+ ES H WN+
Sbjct: 141 HVAYLQQIWWLEVAGEI-DFCFPAGSY--SLFFRLQLGRPHKYMGRRVYGYESIHGWNIK 197
Query: 74 ET 69
T
Sbjct: 198 PT 199
>02_05_1091 +
34044999-34045082,34046848-34047048,34047312-34047523,
34047846-34048413
Length = 354
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 448 CNHCNAVADGDVVYLILIFNLSPLEARFGNC 356
C+H NA++ G +IF S L A G+C
Sbjct: 146 CSHQNALSSGTTALTAMIFGRSLLVANAGDC 176
>06_03_1056 + 27239176-27242361
Length = 1061
Score = 27.9 bits (59), Expect = 9.0
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 9/126 (7%)
Frame = +3
Query: 108 LDPSSFSRPEQAVIKHVTLSLNVDFENKVLNGSATLDVDVLQDIGDVVLDSSEL------ 269
L+ + + P + I +T L +D LNGS + L + + L +EL
Sbjct: 420 LEQNELAGPVPSAIGDLTQLLKLDLSGNSLNGSIPPSLGNLHQLTLLNLSGNELTGHVPS 479
Query: 270 ---TIESIELDGAQLTYKLDDPVPNYGSKLTIQLPKRASSGDKLKIKIKYTTSPSATALQ 440
T+ S+ L +LD P+P +LT +L A SG++ ++ T S +L+
Sbjct: 480 ELFTLSSLSLLMDLSDNQLDGPIPPDVGQLT-KLAFMALSGNRFSGEVP-TELESCQSLE 537
Query: 441 WLQPAQ 458
+L A+
Sbjct: 538 FLDLAR 543
>01_06_1629 -
38749184-38749303,38749389-38749479,38749555-38749630,
38749860-38749932,38750488-38750580,38750827-38750883,
38751406-38751492,38751600-38751674,38751779-38751826
Length = 239
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 204 SATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDDPVPNYGSKLTIQLPKR 371
SA +D V+ GDVVLD +E+T ++I+L GA L D +L + P +
Sbjct: 9 SALVDNHVVP--GDVVLDLTEMTNQTIKL-GAGLRQDCDTIQATSAGRLRLSKPNK 61
>01_06_0147 +
26997641-26997688,26997783-26997857,26997966-26998052,
26998566-26998622,26998867-26998959,26999528-26999600,
26999830-26999905,27000217-27000280,27000951-27000980,
27001251-27001367,27002742-27002782,27002870-27003176,
27003279-27003368,27003479-27003541,27003678-27003752,
27003922-27003984,27004714-27004784,27004885-27005068
Length = 537
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +3
Query: 204 SATLDVDVLQDIGDVVLDSSELTIESIELDGAQLTYKLDDPVPNYGSKLTIQLPKR 371
SA +D V+ GDVVLD +E+T ++I+L GA L D +L + P +
Sbjct: 9 SALVDNHVVP--GDVVLDLAEMTNQTIKL-GAGLRQDCDTIQATSAGRLRLSKPSK 61
>01_01_0328 - 2664412-2664535,2665388-2665465,2667784-2667895,
2668344-2668410,2668473-2668562,2668672-2668787,
2668999-2671924
Length = 1170
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +3
Query: 486 FSQCQPIHARSI-LPCQDTPFVKFTYDAEVTAPEEFTVLMSALRGESRSTKTTFNQPMPL 662
+S+C P+H R + +P + +K + + E T S + + N P+ +
Sbjct: 1008 YSKCSPVHCRKLDIPSSEVALLKVKTNINLPLLELRTAEQSLRTCADFKSNESLNMPLSM 1067
Query: 663 PSYLLAIAVGVLEHR 707
P+ +V + E +
Sbjct: 1068 PTAQFDRSVLIFERK 1082
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,195,873
Number of Sequences: 37544
Number of extensions: 341032
Number of successful extensions: 898
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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