Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19i08f
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical ... 90 1e-18
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AL023844-7|CAA19533.1| 346|Caenorhabditis elegans Hypothetical ... 42 5e-04
U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical pr... 34 0.081
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 33 0.14
Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical pr... 31 0.99
Z81028-4|CAB02692.2| 365|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93374-4|CAB07556.1| 834|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z81028-5|CAI91176.1| 224|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 29 2.3
U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like pr... 29 3.0
AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like ... 29 3.0
Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC084158-10|AAK68568.1| 87|Caenorhabditis elegans Hypothetical... 28 7.0
Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF183390-1|AAF97864.1| 457|Caenorhabditis elegans Rh-like prote... 27 9.2
>AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical
protein F56H1.6 protein.
Length = 381
Score = 90.2 bits (214), Expect = 1e-18
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 3/131 (2%)
Frame = +1
Query: 229 MRAWRIHAYGPTTELRLEEARVPPLRAPDEILVRVHASSVNPIDVAMIGGYGSKILNTLR 408
MRAW + G EL+ E +P + P ++L++V A+SVNPIDV M GYG + L T +
Sbjct: 18 MRAW-VSENGSGVELK--EVPLPVINKPGQVLLKVKAASVNPIDVDMSQGYGREFLGTWK 74
Query: 409 TIESGEGI--EFPLIAGRDFVGEVERAGVGA-KLKRGERIWGVIPPHRQGAHSEYVVVKN 579
IES + FPLI GRD VE G L G+ + V+P G H+E+VV +
Sbjct: 75 KIESCDAAASRFPLIPGRDCTAVVESVGGDVHNLAPGDEVMAVVPVILPGTHAEFVVTDS 134
Query: 580 SWAGKAPSTLS 612
+ K PS LS
Sbjct: 135 KYCSKKPSNLS 145
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 45.6 bits (103), Expect = 3e-05
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Frame = +1
Query: 217 CMGRMRAWRIHAYGPTTELRLEEARVPPLRAPDEILVRVHASSVNPIDVAMIGGYGSKIL 396
C MRA + +G + E+ +P L +++LVR +A+ VNP+D + G K+
Sbjct: 6 CKSSMRAAVVRRFGAPDVIEAVESDMPRLEK-NQVLVRNYAAGVNPVDTYIRAGQYGKLP 64
Query: 397 NTLRTIESGEGIEFPLIAGRDFVGEVERAGVGAK-LKRGERIW 522
N P + G+D G VE G K +K G+R+W
Sbjct: 65 N------------LPYVPGKDGAGFVELVGESVKNVKVGDRVW 95
>AL023844-7|CAA19533.1| 346|Caenorhabditis elegans Hypothetical
protein Y48A6B.9 protein.
Length = 346
Score = 41.5 bits (93), Expect = 5e-04
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = +1
Query: 259 PTTELRLEEARVPPLRAPDEILVRVHASSVNPIDVAMI-GGYGSKILNTLRTIESGEGIE 435
P L+LE VP E LV AS +NP+D+ I G Y + E
Sbjct: 18 PLKVLQLETVEVPAEPGSGECLVEWLASPINPLDINRIQGNYAVRA-------------E 64
Query: 436 FPLIAGRDFVGEVERAGVGAKLKRGERI 519
P+I G + VG V +AG G++ K G+ +
Sbjct: 65 LPVIGGSEGVGRVVKAGSGSRFKSGDHV 92
>U23181-6|AAC48204.1| 801|Caenorhabditis elegans Hypothetical
protein ZK84.1 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.081
Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 4/170 (2%)
Frame = -1
Query: 674 APRTALAAVR----PVYSAPPADISDNVDGALPAQEFFTTTYSECAPWR*GGITPQIRSP 507
AP T +AA P AP AD + D E +E P + +P
Sbjct: 361 APATDIAATETTPAPSVPAPVADAAAGYDSPSSIPEETPAPAAEDTPAPASAAAEETPAP 420
Query: 506 RFSFAPTPALSTSPTKSRPAIKGNSIPSPLSMVRSVFNILEP*PPIIATSMGFTEDA*TR 327
+ TPA T+ + P G + P+ ++ V + + + +
Sbjct: 421 APAAEETPAPETA--SAAPDAAGGAAPADVAAPADVATTAPETSSAQSAAGSYDVPSEPA 478
Query: 326 TKISSGALSGGTRASSSLNSVVGPYACIRHALIRPIQASA*DAATLNCCP 177
+++++ + T A S + +GP A PI+A A DAATL P
Sbjct: 479 SEVTAPIVESATEAPSDSAAPIGPAAS--EPAPAPIEAPATDAATLETAP 526
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 33.5 bits (73), Expect = 0.14
Identities = 31/92 (33%), Positives = 40/92 (43%)
Frame = -1
Query: 674 APRTALAAVRPVYSAPPADISDNVDGALPAQEFFTTTYSECAPWR*GGITPQIRSPRFSF 495
A A AA PV++APPA + A PA F AP P+ +F
Sbjct: 85 AAAPAFAAPAPVFAAPPAPVL-----AAPA-PFLAPPVPPVAPIV-SAFAPRPVLAAPAF 137
Query: 494 APTPALSTSPTKSRPAIKGNSIPSPLSMVRSV 399
AP P L+ P + PAI + P+PL R V
Sbjct: 138 APAPILAPRPVLAAPAIPAFA-PAPLLAPRPV 168
Score = 28.3 bits (60), Expect = 5.3
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
Frame = -1
Query: 671 PRTALAAVRPVYSAPPADISDNVDGALPAQEFFTTTYSECAPWR*GGITPQIRSPRF-SF 495
P LAA P + P ++ V P + AP P + +P +F
Sbjct: 101 PAPVLAAPAPFLAPPVPPVAPIVSAFAPRPVLAAPAF---APAPILAPRPVLAAPAIPAF 157
Query: 494 APTPALSTSPTKSRPAIKGNSIPSPLSMVRSV 399
AP P L+ P + PAI + P+P+ R V
Sbjct: 158 APAPLLAPRPVLAAPAIPAFA-PAPIIAPRPV 188
>Z70756-8|CAA94795.2| 212|Caenorhabditis elegans Hypothetical
protein T06E4.9 protein.
Length = 212
Score = 30.7 bits (66), Expect = 0.99
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = -1
Query: 674 APRTALAAVRPVYSAPPADISDNVDGALPAQEFFTTTYSECAPWR*GGITPQIRSPRFSF 495
+P LAA P+ APPA + A P F + AP + P +R P F++
Sbjct: 105 SPAPVLAAPAPLL-APPAPVF-----AAPRPVFAAPALAPVAP-----MAPVLRGPAFAY 153
Query: 494 APTPALS 474
AP+P L+
Sbjct: 154 APSPVLA 160
>Z81028-4|CAB02692.2| 365|Caenorhabditis elegans Hypothetical
protein B0365.5a protein.
Length = 365
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 468 AHKITSRYQREFYPFTTFYGSQCV*YFRTITSNH 367
A K T Q +FY +TTFY C+ Y H
Sbjct: 202 ARKCTQEDQTKFYQYTTFYRIHCIDYEEGYIQEH 235
>Z70756-7|CAA94794.2| 199|Caenorhabditis elegans Hypothetical
protein T06E4.8 protein.
Length = 199
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = -1
Query: 671 PRTALAAVRPVYSAPPADISDNVDGALPAQEFFTTTYSECAPWR*GGITPQIRSPRFSFA 492
P LAA P+ APPA + A P F + + AP + P +R P F++A
Sbjct: 93 PAPVLAAPAPLL-APPAPVF-----AAPRPVFASPALAPVAP-----MAPILRGPAFAYA 141
Query: 491 PTPALS 474
P+P L+
Sbjct: 142 PSPVLA 147
>Z93374-4|CAB07556.1| 834|Caenorhabditis elegans Hypothetical
protein C06C6.6 protein.
Length = 834
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = -1
Query: 530 ITPQIRSPRFSFAPTPALSTSPT----KSRPAIKGNSIPSPLSMVRSVFNILE 384
ITP R+P S A +PA S + K +K N+ PSP+ M +S+ +++E
Sbjct: 763 ITPPARTPTVSPAKSPANSVYKSEKLNKDVSRLKANAKPSPIVM-KSIMDVVE 814
>Z81028-5|CAI91176.1| 224|Caenorhabditis elegans Hypothetical
protein B0365.5b protein.
Length = 224
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 468 AHKITSRYQREFYPFTTFYGSQCV*Y 391
A K T Q +FY +TTFY C+ Y
Sbjct: 62 ARKCTQEDQTKFYQYTTFYRIHCIDY 87
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = -1
Query: 557 ECAPWR*GGITP--QIRSPRFS-FAPTPALSTSPTKSRPAIKGNSIPSP 420
EC GG+ P IR P S F P P+L + PA G + PSP
Sbjct: 107 ECLTAANGGVAPGPSIRPPAPSPFIPQPSLPNIISSMLPAPSGGATPSP 155
>U80450-5|AAB37830.1| 587|Caenorhabditis elegans Kinesin-like
protein protein 15 protein.
Length = 587
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -1
Query: 488 TPALSTSPTKSRPAIKGNSIPSPLSMVRSVFNILEP*PPIIATSMGFTEDA*TRTKISSG 309
T +L S T++RP + +PS ++++ LE +A + F E ++ +I G
Sbjct: 128 TSSLKPSVTRARPVAQKPILPSKMALLEEKIAQLE---SAMAEATDFAEHQKSKIQILDG 184
Query: 308 ALSGGTRASSSL 273
L G R SL
Sbjct: 185 KLEGADRKLISL 196
>AB032080-1|BAA92263.2| 587|Caenorhabditis elegans kinesin like
protein-15 protein.
Length = 587
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -1
Query: 488 TPALSTSPTKSRPAIKGNSIPSPLSMVRSVFNILEP*PPIIATSMGFTEDA*TRTKISSG 309
T +L S T++RP + +PS ++++ LE +A + F E ++ +I G
Sbjct: 128 TSSLKPSVTRARPVAQKPILPSKMALLEEKIAQLE---SAMAEATDFAEHQKSKIQILDG 184
Query: 308 ALSGGTRASSSL 273
L G R SL
Sbjct: 185 KLEGADRKLISL 196
>Z69636-1|CAA93465.2| 1180|Caenorhabditis elegans Hypothetical
protein F20B10.1 protein.
Length = 1180
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -1
Query: 314 SGALSGGTRASSSLNSVVGPYACIRHALIRPIQAS 210
+G GGT SSS+ +GP C A P+ S
Sbjct: 668 TGLFLGGTTKSSSIEVEIGPLKCRNRATFDPVTFS 702
>AC084158-10|AAK68568.1| 87|Caenorhabditis elegans Hypothetical
protein Y69A2AR.23 protein.
Length = 87
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = -1
Query: 530 ITPQI-RSPRFSFAPTPALSTSPTKSRPAIKGNSIPSPLSM 411
++P+I SPR +P P T T P KG PS + +
Sbjct: 38 VSPRIGMSPRVGLSPKPIARTPQTARTPTKKGPMSPSAIGL 78
>Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical
protein E02H4.2 protein.
Length = 560
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 549 PLAMRGYNSPNSLSTL*FCSHTSPFNFAHKITSRYQR 439
P +SPN L L + H +PF F ITS+Y++
Sbjct: 167 PRTPNAQSSPN-LKDLNYLDHLTPFLFPPDITSQYRK 202
>AF183390-1|AAF97864.1| 457|Caenorhabditis elegans Rh-like
protein-1 protein.
Length = 457
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 320 ISSGALSGGTRASSSLNSVVGPYACI 243
I S LSGG SS N+V+ PY +
Sbjct: 270 IQSSTLSGGVAIGSSANAVLHPYHAV 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,109,974
Number of Sequences: 27780
Number of extensions: 328344
Number of successful extensions: 796
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -