Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19i07r
(918 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical ... 180 2e-45
U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical pr... 164 7e-41
Z66497-8|CAA91285.2| 433|Caenorhabditis elegans Hypothetical pr... 33 0.22
AJ745071-1|CAG32977.1| 433|Caenorhabditis elegans core alpha1,3... 33 0.22
Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr... 30 2.7
AF067211-16|AAC16988.3| 399|Caenorhabditis elegans Hypothetical... 29 4.7
Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical pr... 28 8.1
AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein. 28 8.1
AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein. 28 8.1
AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical ... 28 8.1
>AF099915-3|AAC68766.1| 475|Caenorhabditis elegans Hypothetical
protein E02H9.5 protein.
Length = 475
Score = 180 bits (437), Expect = 2e-45
Identities = 100/281 (35%), Positives = 155/281 (55%), Gaps = 6/281 (2%)
Frame = -3
Query: 892 ADYLCGKNVLLAHAKAYHIYDKEFRPTQNGNISITISCQWYEPESDREEDINAANEMILF 713
A Y N+LL HAK Y YD+ ++PTQ+G + IT ++ P +D +EDI A N +
Sbjct: 200 APYFGAANMLLTHAKIYRNYDQNYKPTQHGILGITNGGRFCFPATDSQEDIEACNRARDW 259
Query: 712 ECGQYGHPIFTDSGDYPEIVKQRVAAKSAEQGFLRSRFPELSPEEVQYIRGTSDFFGLNH 533
PI + SGD+P ++++R+ F+ P+ S EE + I+G++DF G+N+
Sbjct: 260 LFNFTIEPILSGSGDFPVLMRERMP-------FI----PKFSEEEKEIIKGSTDFIGINY 308
Query: 532 YSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEWSIGSHNRVKTTPWGFYKLLRQISNF 353
Y +FL + G D G +F + + I ++ P G K+LR +
Sbjct: 309 YLSFLVRAPKD--GEKASSQSQHDGGYVFVEGKWDKICGETWIRYAPDGLLKILRYVKEK 366
Query: 352 YNNVPIIITENGFATLTG------FEDNDRITHLRLYLNALLDAIKDGSDIRLYTPWSLM 191
Y N P+ ITENG + G F D RI ++ +L A+ A+ +G ++ YT W+LM
Sbjct: 367 YANTPVFITENGCMDIVGQDQEDAFHDQHRIDYISGHLEAVAKALDEGCNVIGYTVWTLM 426
Query: 190 DNFEWMSGYTQRFGLYEVDYDSPELTRTPRKSAFIFKEIVK 68
DNFEW G+ +FGL EVD++SP+ TRT +KSA+ +KE +K
Sbjct: 427 DNFEWDDGFELKFGLCEVDFESPDKTRTMKKSAYFYKEFIK 467
>U41557-9|AAA83309.1| 479|Caenorhabditis elegans Hypothetical protein
C50F7.10 protein.
Length = 479
Score = 164 bits (399), Expect = 7e-41
Identities = 98/284 (34%), Positives = 152/284 (53%), Gaps = 9/284 (3%)
Frame = -3
Query: 892 ADYLCGKNVLLAHAKAYHIYDKEFRPTQNGNISITISCQWYEPESDREEDINAANEMILF 713
A Y+ N+LL HAK Y Y K ++ TQNG I IT ++ P SD D++A N + +
Sbjct: 200 APYIAATNMLLTHAKIYRNYQKNYKETQNGLIGITNGGRFCLPASDSPADLDACNRALDW 259
Query: 712 ECGQYGHPIFTDSGDYPEIVKQRVAAKSAEQGFLRSRFPELSPEEVQYIRGTSDFFGLNH 533
PI TDSGD+P +++++ FL P+ S EE + I+G++DF G+N+
Sbjct: 260 LFNYTIEPILTDSGDFPASMREKLP-------FL----PKFSEEEKKLIKGSTDFLGINY 308
Query: 532 YSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEWSIGSHNRVKTTPWGFYKLLRQISNF 353
Y + + RN + G D F + + I V+ P G + LL+ + +
Sbjct: 309 YLSHIV-RNLND-GEEPASQSERDAAYAFNEGKWEKICGETWVRYAPDGLFGLLKYVRDK 366
Query: 352 YNNVPIIITENGFATLTGFE---------DNDRITHLRLYLNALLDAIKDGSDIRLYTPW 200
YNN+P+ ITENG L G E D RI + +L A+ A+++G ++ YT W
Sbjct: 367 YNNIPVFITENGCMDLVGGEGRKEEEILDDKHRIKFISGHLEAVAKALEEGCNVIGYTLW 426
Query: 199 SLMDNFEWMSGYTQRFGLYEVDYDSPELTRTPRKSAFIFKEIVK 68
+LMDNFEW G+ +FG+ VD+DSP+ TRT + SA ++ ++
Sbjct: 427 TLMDNFEWDDGFGVKFGICRVDFDSPDKTRTMKYSAKYYQTFIR 470
>Z66497-8|CAA91285.2| 433|Caenorhabditis elegans Hypothetical
protein K08F8.3 protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 553 DFFGLNHYSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEWSIGSHNRVKTTPWGFYKL 374
DF + +L Y + Y E + D V+F D GSH+ V PWGF ++
Sbjct: 342 DFKSVKEMGDYLNYLMNNKTAYMEYFEWRHDYKVVFLD------GSHHDVLERPWGFCQV 395
Query: 373 LR 368
R
Sbjct: 396 CR 397
>AJ745071-1|CAG32977.1| 433|Caenorhabditis elegans core
alpha1,3-fucosyltransferase protein.
Length = 433
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = -3
Query: 553 DFFGLNHYSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEWSIGSHNRVKTTPWGFYKL 374
DF + +L Y + Y E + D V+F D GSH+ V PWGF ++
Sbjct: 342 DFKSVKEMGDYLNYLMNNKTAYMEYFEWRHDYKVVFLD------GSHHDVLERPWGFCQV 395
Query: 373 LR 368
R
Sbjct: 396 CR 397
>Z49068-4|CAC42319.1| 705|Caenorhabditis elegans Hypothetical
protein K01C8.3b protein.
Length = 705
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -3
Query: 763 ESDREEDINAANEMILFECGQYGHPIFTDSGDYPEIVKQRVAAKSAEQGFLRSRFPELSP 584
E R+ D NA+ M E QYG DY E +++R + E G+L+ P +P
Sbjct: 65 EDPRQNDNNASG-MTRDEFRQYGKETVDYIVDYLENIQKRRVVPAIEPGYLKDLIPSEAP 123
Query: 583 EEVQYIRGTSDFF 545
+ + F
Sbjct: 124 NTPESFESVMEDF 136
>Z49068-3|CAA88862.1| 650|Caenorhabditis elegans Hypothetical
protein K01C8.3a protein.
Length = 650
Score = 31.1 bits (67), Expect = 1.2
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -3
Query: 763 ESDREEDINAANEMILFECGQYGHPIFTDSGDYPEIVKQRVAAKSAEQGFLRSRFPELSP 584
E R+ D NA+ M E QYG DY E +++R + E G+L+ P +P
Sbjct: 65 EDPRQNDNNASG-MTRDEFRQYGKETVDYIVDYLENIQKRRVVPAIEPGYLKDLIPSEAP 123
Query: 583 EEVQYIRGTSDFF 545
+ + F
Sbjct: 124 NTPESFESVMEDF 136
>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical protein
ZK897.1 protein.
Length = 1396
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 514 TSKMSSSDL-NQKSLMFHGCIELLQGLALGTVSVRNLVQH 630
T++ SS + N FHGC ELL+ + + + V L +H
Sbjct: 1279 TAQQSSGQIGNSYVTFFHGCTELLRQVIIDEIWVNGLFEH 1318
>AF067211-16|AAC16988.3| 399|Caenorhabditis elegans Hypothetical
protein B0205.4 protein.
Length = 399
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = -3
Query: 460 VGVLFYDKEEWSIGSHNRVK---TTPWGFYK-LLRQISNFYNNVPIIITENGFA 311
VGV + S+ S NR+ TP +YK ++QIS Y NV II + A
Sbjct: 259 VGVHIRHGMDISMNSRNRIHGHVDTPIEYYKRAIQQISKIYENVAFIICSDNVA 312
>Z70208-4|CAC42306.1| 879|Caenorhabditis elegans Hypothetical
protein F54B11.3b protein.
Length = 879
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -3
Query: 607 SRFPELSPEEVQYIRGTSDFFGLNHYSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEW 428
+R P L+ EE+ + G + N+ + + S+ ++E+P+ ++E W
Sbjct: 49 ARSPRLTEEELDALTGDLPY-ATNYTYAYSKIYDPSLPDHWEVPNLGGTTSGSLSEQEHW 107
Query: 427 SIGSHNR 407
S S +R
Sbjct: 108 SAASLSR 114
>Z70208-3|CAA94142.2| 1111|Caenorhabditis elegans Hypothetical
protein F54B11.3a protein.
Length = 1111
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -3
Query: 607 SRFPELSPEEVQYIRGTSDFFGLNHYSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEW 428
+R P L+ EE+ + G + N+ + + S+ ++E+P+ ++E W
Sbjct: 49 ARSPRLTEEELDALTGDLPY-ATNYTYAYSKIYDPSLPDHWEVPNLGGTTSGSLSEQEHW 107
Query: 427 SIGSHNR 407
S S +R
Sbjct: 108 SAASLSR 114
>AF200707-1|AAF15884.1| 879|Caenorhabditis elegans UNC-84B protein.
Length = 879
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -3
Query: 607 SRFPELSPEEVQYIRGTSDFFGLNHYSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEW 428
+R P L+ EE+ + G + N+ + + S+ ++E+P+ ++E W
Sbjct: 49 ARSPRLTEEELDALTGDLPY-ATNYTYAYSKIYDPSLPDHWEVPNLGGTTSGSLSEQEHW 107
Query: 427 SIGSHNR 407
S S +R
Sbjct: 108 SAASLSR 114
>AF200706-1|AAF15883.1| 1111|Caenorhabditis elegans UNC-84A protein.
Length = 1111
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -3
Query: 607 SRFPELSPEEVQYIRGTSDFFGLNHYSTFLTYRNESVVGYYEIPSYNDDVGVLFYDKEEW 428
+R P L+ EE+ + G + N+ + + S+ ++E+P+ ++E W
Sbjct: 49 ARSPRLTEEELDALTGDLPY-ATNYTYAYSKIYDPSLPDHWEVPNLGGTTSGSLSEQEHW 107
Query: 427 SIGSHNR 407
S S +R
Sbjct: 108 SAASLSR 114
>AF003134-6|AAB54146.3| 827|Caenorhabditis elegans Hypothetical
protein ZC581.9 protein.
Length = 827
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = -3
Query: 652 KQRVAAKSAEQGFLRSRFPELSPEEVQYIRGTSDFFGLNHYSTFLTYRN 506
KQR A S + RS EL P+ Q + F L H + LTYRN
Sbjct: 773 KQRNARASERRARTRSPNAELDPQREQPPARPNSFTNLGH-NIVLTYRN 820
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,178,924
Number of Sequences: 27780
Number of extensions: 429409
Number of successful extensions: 1157
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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