Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19h17r
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.7  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   4.9  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   4.9  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   4.9  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   8.6  

>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 1/90 (1%)
 Frame = +1

Query: 454 ARGFNREPHASRKYLYRMEAMRKRNLWVYFDFPLQHRNSHD-HRLRKQDYYSRMSISVAS 630
           ++ ++   +   +YLY  + +  R         L H    D  +     YY  M+ S   
Sbjct: 246 SKEYDLPDYRGEEYLYSHKLLLNRYYLERLSNDLPHLEEFDWQKPFYPGYYPTMTYSNGL 305

Query: 631 YVP*KHYWNNNPVVHSGYRICEINKTEKSS 720
             P +  W+N P+    Y    +NK  + S
Sbjct: 306 PFPQRPIWSNFPIYKYKYIREIMNKESRIS 335


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 475 PHASRKYLYRMEAMR 519
           PHA  KY+ R++A+R
Sbjct: 451 PHAVPKYIQRLKAIR 465


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 475 PHASRKYLYRMEAMR 519
           PHA  KY+ R++A+R
Sbjct: 366 PHAVPKYIQRLKAIR 380


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 475 PHASRKYLYRMEAMR 519
           PHA  KY+ R++A+R
Sbjct: 685 PHAVPKYIQRLKAIR 699


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 477 WFSVKSPCEYKITHHTIVKKSH 412
           +F+   PC   +T H I+K+++
Sbjct: 332 YFTFTRPCGITLTFHEILKRAN 353


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = -1

Query: 459 PCEYKITHHTIVKKSHIKT*VRMQYTKVH 373
           P E+K+   T+ ++   +   RM+Y   H
Sbjct: 582 PTEWKVRPSTVEEREEFRRQERMRYAAPH 610


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,123
Number of Sequences: 438
Number of extensions: 5104
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)