Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19h17f
(774 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 23 3.2
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.2
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 4.2
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 4.2
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 4.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 4.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 23 4.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 4.2
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 4.2
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 23 4.2
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 7.3
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 7.3
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 22 7.3
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 22 7.3
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 22 7.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 21 9.6
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +1
Query: 127 WENTLKASLTQIVKFYQDLIRIYKAVPLS*RR*SYLCH 240
W+N+ A +Q K + + YK++ L+ ++ Y H
Sbjct: 428 WDNSTSAGFSQTNKTWLPVNENYKSLNLAAQKREYYSH 465
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 474 VVNFSKFDETIRINSPLCSAQILRLFYNNF 385
++NFS ++ + + + + L +FYNNF
Sbjct: 505 ILNFSNEEQIVDLKAFNNVPKKLNMFYNNF 534
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 663 SPFFTLSANDILKSRLEVVVVFEGVIESTGQPVQAK 556
+P +TL ++KS E F G + G P+ +K
Sbjct: 509 APIYTLKRKGLIKSENEAADFFSGSC-APGAPLDSK 543
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 663 SPFFTLSANDILKSRLEVVVVFEGVIESTGQPVQAK 556
+P +TL ++KS E F G + G P+ +K
Sbjct: 509 APIYTLKRKGLIKSENEAADFFSGSC-APGAPLDSK 543
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 4.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -1
Query: 663 SPFFTLSANDILKSRLEVVVVFEGVIESTGQPVQAK 556
+P +TL ++KS E F G + G P+ +K
Sbjct: 509 APIYTLKRKGLIKSENEAADFFSGSC-APGAPLDSK 543
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/23 (34%), Positives = 18/23 (78%)
Frame = +3
Query: 159 NSKILSRLDTDLQSCTTQLTALK 227
+SK+++R DTD ++ T ++ A++
Sbjct: 1140 DSKVMTRPDTDSENWTPKMMAVE 1162
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.6 bits (46), Expect = 4.2
Identities = 10/30 (33%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -1
Query: 252 VSEAMTQVA---LTPLAEWYSFVNPYQVLI 172
+ EA+TQ ++PL +WYS + + L+
Sbjct: 415 MKEAITQWQGNPISPLNDWYSLASSWPALV 444
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 22.6 bits (46), Expect = 4.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 210 EWYSFVNPYQVLIKF 166
EW SF+NP+ ++F
Sbjct: 390 EWSSFINPWTKKLEF 404
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 629 KMSLADNVKNGLFS 670
K +LAD +KNG+ S
Sbjct: 207 KATLADQIKNGIVS 220
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -1
Query: 474 VVNFSKFDETIRINSPLCSAQILRLFYNNF 385
++NFS ++ + + + + L +FYNNF
Sbjct: 505 ILNFSNEEQIVDLKAFNNVPKKLNMFYNNF 534
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 22.6 bits (46), Expect = 4.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 210 EWYSFVNPYQVLIKF 166
EW SF+NP+ ++F
Sbjct: 96 EWSSFINPWTKKLEF 110
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 499 INDLNKPMSPQDFPCNVTRFSLHWLT 576
I +N SP+ FP T LH T
Sbjct: 408 ITSVNSTSSPKPFPRRATLAQLHNFT 433
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 342 TLPSEDVDVLRQLVF*VPLCLCTWSASLTFVS 247
+LP + L L + V +CL T++++L V+
Sbjct: 265 SLPPTEKTPLISLYYGVSICLVTFASALAVVT 296
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 21.8 bits (44), Expect = 7.3
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -1
Query: 258 TFVSEAMTQVALTPLAEWY 202
T V A+ + TP +WY
Sbjct: 95 TLVKNAIVTIDATPFRQWY 113
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 629 KMSLADNVKNGLFS 670
K +LAD +KNG+ S
Sbjct: 202 KATLADQIKNGIVS 215
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 21.8 bits (44), Expect = 7.3
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 213 AEWYSFVNPYQVLIKFYY 160
A Y FV P Q +F+Y
Sbjct: 69 ASGYGFVPPNQAFYRFFY 86
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.4 bits (43), Expect = 9.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 325 IFGRQGSELNTDMYYSSLN 381
IFG S L ++YYS+L+
Sbjct: 251 IFGMALSPLTQNLYYSALS 269
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,744
Number of Sequences: 438
Number of extensions: 4148
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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