Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19h03f
(795 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 56 4e-08
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 56 4e-08
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redunda... 36 0.044
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 34 0.10
AL034393-14|CAA22327.1| 323|Caenorhabditis elegans Hypothetical... 33 0.18
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 33 0.24
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 33 0.24
U40419-6|AAL02445.2| 408|Caenorhabditis elegans Hypothetical pr... 33 0.31
Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical pr... 32 0.41
Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical pr... 32 0.41
AC090999-7|AAK26142.1| 438|Caenorhabditis elegans Hypothetical ... 31 0.95
Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical pr... 30 2.2
Z37139-2|CAA85486.1| 384|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL132863-3|CAB60570.1| 412|Caenorhabditis elegans Hypothetical ... 30 2.2
AF098986-2|AAC67423.1| 410|Caenorhabditis elegans Hypothetical ... 29 3.8
AC006713-2|AAK68406.1| 310|Caenorhabditis elegans Hypothetical ... 29 3.8
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z68120-4|CAA92202.1| 328|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81472-3|CAB03888.2| 468|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z68337-9|CAA92751.2| 334|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical ... 28 8.9
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 55.6 bits (128), Expect = 4e-08
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Frame = +1
Query: 292 MVHLKMLSTQLSSDTLTINDLPNEILIYIFSMIDFESLLAVAKVCSRWQQLCLTPCVWDN 471
M + LS ++L LP E+L+ +FS +D ++L A+VC W L L W
Sbjct: 40 MYLITTLSPAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQR 99
Query: 472 TRLVVCMKNY-VSISESIVPFVAKYLKNVKLQYFK-LYSQVRTSLISYCPNLTHLEI-SI 642
L ++ ++ E++ +LK + L+ + ++ + S CPNL HL +
Sbjct: 100 VDLFTFQRDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRC 159
Query: 643 SQVDSCIFEDLGHW-PNLKFLSFRN 714
+V E+LG + L +L+ N
Sbjct: 160 KRVTDASCENLGRYCHKLNYLNLEN 184
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 55.6 bits (128), Expect = 4e-08
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 4/145 (2%)
Frame = +1
Query: 292 MVHLKMLSTQLSSDTLTINDLPNEILIYIFSMIDFESLLAVAKVCSRWQQLCLTPCVWDN 471
M + LS ++L LP E+L+ +FS +D ++L A+VC W L L W
Sbjct: 40 MYLITTLSPAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSWSILALDGSNWQR 99
Query: 472 TRLVVCMKNY-VSISESIVPFVAKYLKNVKLQYFK-LYSQVRTSLISYCPNLTHLEI-SI 642
L ++ ++ E++ +LK + L+ + ++ + S CPNL HL +
Sbjct: 100 VDLFTFQRDVKTAVVENLARRCGGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRC 159
Query: 643 SQVDSCIFEDLGHW-PNLKFLSFRN 714
+V E+LG + L +L+ N
Sbjct: 160 KRVTDASCENLGRYCHKLNYLNLEN 184
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Daf-12, redundant
with protein 1 protein.
Length = 936
Score = 35.5 bits (78), Expect = 0.044
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 343 INDLPNEILIYIFSMIDFESLLAVAKVCSRWQQLCLTPCVW 465
IN LP E+L+ +FS + +SLLA + V R+ Q+ + VW
Sbjct: 162 INRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVW 202
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 334 TLTINDLPNEILIYIFSMIDFESLLAVAKVCSRWQQLCLTPCVW 465
T TI LP+++L IF + + + V VC RW+ P +W
Sbjct: 29 TKTIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLW 72
>AL034393-14|CAA22327.1| 323|Caenorhabditis elegans Hypothetical
protein Y18D10A.18 protein.
Length = 323
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +1
Query: 304 KMLSTQLSSDTLTINDLPNEILIYIFSMIDFESLLAVAKVCSRWQ 438
K+ S +LS LT DLP + L F +D+ + + KVC +++
Sbjct: 21 KLDSMKLSKSKLTFTDLPMDALYECFKQLDYLERMPLRKVCRKFK 65
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 340 TINDLPNEILIYIFSMIDFESLLAVAKVCSRWQQLCLTPCVW 465
TI LP+++L IF + + + V VC RW+ P +W
Sbjct: 48 TIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLW 89
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 340 TINDLPNEILIYIFSMIDFESLLAVAKVCSRWQQLCLTPCVW 465
TI LP+++L IF + + + V VC RW+ P +W
Sbjct: 65 TIEKLPDKVLRDIFQYLSPKQINQVGLVCKRWRVTSQNPLLW 106
>U40419-6|AAL02445.2| 408|Caenorhabditis elegans Hypothetical
protein C27F2.7 protein.
Length = 408
Score = 32.7 bits (71), Expect = 0.31
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 352 LPNEILIYIFSMIDFESLLAVAKVCSRWQQLCL 450
LP+ + I S +D +SLL +++ CS +QLCL
Sbjct: 130 LPDTDICQIMSFLDAQSLLNLSQTCSHLRQLCL 162
>Z48809-8|CAA88748.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +1
Query: 517 SIVPFVAKYLKNVKLQYFKLYSQVRTSLISYCPNLTHLEISISQVDSCIFE 669
+I+P + + +++ +L+ + + Y PNLTHL + I+ +++ I +
Sbjct: 319 AIIPLLGHKITKLQISVPRLFDEPLKLVTEYLPNLTHLSLEINHLNTNILQ 369
>Z48795-8|CAA88732.2| 535|Caenorhabditis elegans Hypothetical
protein T01E8.1 protein.
Length = 535
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/51 (23%), Positives = 29/51 (56%)
Frame = +1
Query: 517 SIVPFVAKYLKNVKLQYFKLYSQVRTSLISYCPNLTHLEISISQVDSCIFE 669
+I+P + + +++ +L+ + + Y PNLTHL + I+ +++ I +
Sbjct: 319 AIIPLLGHKITKLQISVPRLFDEPLKLVTEYLPNLTHLSLEINHLNTNILQ 369
>AC090999-7|AAK26142.1| 438|Caenorhabditis elegans Hypothetical
protein Y82E9BR.12 protein.
Length = 438
Score = 31.1 bits (67), Expect = 0.95
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 340 TINDLPNEILIYIFSMIDFESLLAVAKVCS 429
T++D+P EIL +F ++ + LA KVCS
Sbjct: 104 TLSDMPTEILNQVFEKLEPKDRLACRKVCS 133
>Z82278-8|CAB05251.2| 312|Caenorhabditis elegans Hypothetical
protein M162.8 protein.
Length = 312
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 310 LSTQLSSDTLTINDLPNEILIYIFSMIDFESLLAVAKVCSR 432
L ++ SSD ++ D+PN +L I +D + L + KVC +
Sbjct: 9 LDSKKSSDAPSLFDMPNRVLHEIMDNVDPINRLVLRKVCRK 49
>Z37139-2|CAA85486.1| 384|Caenorhabditis elegans Hypothetical
protein C14B1.3 protein.
Length = 384
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Frame = +1
Query: 307 MLSTQLSSDTLTIND---LPNEILIYIFSMIDFESLLAVAKVCSRWQQLCLTPCVW 465
M S Q +D I D +PNE IF +D +SLL C R+ L + W
Sbjct: 9 MQSLQFKTDVPVIIDAETVPNECFSPIFRRLDKKSLLNCQLACHRFNDLISSDSFW 64
>AL132863-3|CAB60570.1| 412|Caenorhabditis elegans Hypothetical
protein Y37H2A.5 protein.
Length = 412
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = +1
Query: 343 INDLPNEILIYIFSMIDFESLLAVAKVCSRWQQL--CLTP------CVWDNTRLVVCMK- 495
+ D+PNEIL+ I + D + + + KV R++ L + P CV D + + V +K
Sbjct: 83 LGDMPNEILVKIMDIQDPINRIVIRKVSQRFRSLFDVMDPGFKSFKCVLDTSEVEVVLKD 142
Query: 496 NYVSISES 519
NY +S
Sbjct: 143 NYTPRDDS 150
>AF098986-2|AAC67423.1| 410|Caenorhabditis elegans Hypothetical
protein C36C9.3 protein.
Length = 410
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +1
Query: 340 TINDLPNEILIYIFSMIDFESLLAVAKVCSRWQQLCLTP 456
T+ LP ++ +I +DF LA+AKVC+ ++ + P
Sbjct: 72 TMYALPLNMIHFIVDRVDFIDTLALAKVCTGFRDVVRIP 110
>AC006713-2|AAK68406.1| 310|Caenorhabditis elegans Hypothetical
protein Y119D3A.3 protein.
Length = 310
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 322 LSSDTLTINDLPNEILIYIFSMIDFESLLAVAKVC 426
+S+ LT+ DLP + ++ ++ E LL KVC
Sbjct: 1 MSAKRLTLLDLPITVANHVLEKLEIEELLTCRKVC 35
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 343 INDLPNEILIYIFSMIDFESLLAVAKVCSRWQQL 444
I ++P+ IL IF D+ L + +VC RW +
Sbjct: 10 IPNMPDLILRKIFDQYDYPVLCKMERVCRRWTNI 43
>Z68120-4|CAA92202.1| 328|Caenorhabditis elegans Hypothetical
protein T24C2.4 protein.
Length = 328
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = +1
Query: 337 LTINDLPNEILIYIFSMIDFESLLAVAKV 423
LT++DLPNE++ + +D ++ L + KV
Sbjct: 24 LTLSDLPNELISQVMKNLDPQNRLTLRKV 52
>Z81472-3|CAB03888.2| 468|Caenorhabditis elegans Hypothetical
protein C16D6.2 protein.
Length = 468
Score = 27.9 bits (59), Expect = 8.9
Identities = 29/96 (30%), Positives = 45/96 (46%)
Frame = -3
Query: 409 LAGTQNRS*RIYK*VFHLGDHL*LKCQNLVEYSTSSGAP*FNTPAHAFILIIDVCLMSHE 230
LA T+N+S + +F L L C ++V TS+ +I +C ++
Sbjct: 50 LAITRNKSLQTVPNLFILS----LSCSDIVVCCTSATITPITAFKKEWIFGEALCRIAPF 105
Query: 229 INL*SPCFALEYKLTFAFIERIILIRFLYK*KSSHY 122
I S CF+ + LT I+R ILIRF + +HY
Sbjct: 106 IAGISLCFST-FTLTAISIDRYILIRFPMRKPITHY 140
>Z68337-9|CAA92751.2| 334|Caenorhabditis elegans Hypothetical
protein M7.13 protein.
Length = 334
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 51 YQTEFLRHNIKNNFHL 4
Y TEF+R NI NNF+L
Sbjct: 164 YTTEFVRENILNNFNL 179
>AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical
protein T10B11.6 protein.
Length = 325
Score = 27.9 bits (59), Expect = 8.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 562 QYFKLYSQVRTSLISYCPNLTHLEISISQVD---SCIFEDLGHWPNLKFLSFRNSLIVQN 732
+Y K+Y+ ++S CP H I S+V S +F + P F SF I+ +
Sbjct: 86 KYIKVYNDEGYRVVSLCPPCYHYSIPNSRVGFYMSPLFRAIDAKPG-DFRSFAKCPIIVH 144
Query: 733 SQNANG 750
S + NG
Sbjct: 145 SFSMNG 150
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,069,279
Number of Sequences: 27780
Number of extensions: 325300
Number of successful extensions: 748
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1935274832
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -