Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19g16r
         (857 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC073997-1|AAH73997.1|  195|Homo sapiens peroxisomal membrane pr...    68   4e-11
AY044439-1|AAK95858.1|  195|Homo sapiens 22 kDa peroxisomal memb...    68   4e-11
AF250136-1|AAF73963.1|  195|Homo sapiens 22kDa peroxisomal membr...    68   4e-11
BC093008-1|AAH93008.1|  206|Homo sapiens hypothetical protein MG...    66   1e-10
BC005064-1|AAH05064.1|  181|Homo sapiens FKSG24 protein protein.       42   0.002
AF416712-1|AAL16806.1|  181|Homo sapiens unknown protein.              42   0.002

>BC073997-1|AAH73997.1|  195|Homo sapiens peroxisomal membrane
           protein 2, 22kDa protein.
          Length = 195

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
 Frame = -2

Query: 727 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 554
           H+FY  +E   P E    PLA  ++LLL+RL+FAP         +   EGK   A   ++
Sbjct: 88  HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKM 144

Query: 553 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 410
              + P L  NW+  T  Q IN+ ++P   RVLF N+    W  +LAS
Sbjct: 145 RGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192


>AY044439-1|AAK95858.1|  195|Homo sapiens 22 kDa peroxisomal
           membrane protein 2 protein.
          Length = 195

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
 Frame = -2

Query: 727 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 554
           H+FY  +E   P E    PLA  ++LLL+RL+FAP         +   EGK   A   ++
Sbjct: 88  HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKM 144

Query: 553 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 410
              + P L  NW+  T  Q IN+ ++P   RVLF N+    W  +LAS
Sbjct: 145 RGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192


>AF250136-1|AAF73963.1|  195|Homo sapiens 22kDa peroxisomal membrane
           protein-like protein.
          Length = 195

 Score = 68.1 bits (159), Expect = 4e-11
 Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 2/108 (1%)
 Frame = -2

Query: 727 HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 554
           H+FY  +E   P E    PLA  ++LLL+RL+FAP         +   EGK   A   ++
Sbjct: 88  HFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDASAFAAKM 144

Query: 553 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLAS 410
              + P L  NW+  T  Q IN+ ++P   RVLF N+    W  +LAS
Sbjct: 145 RGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYLAS 192


>BC093008-1|AAH93008.1|  206|Homo sapiens hypothetical protein
           MGC12972 protein.
          Length = 206

 Score = 66.5 bits (155), Expect = 1e-10
 Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
 Frame = -2

Query: 727 HYFYETVERLFPEESA-SFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 554
           HY+Y +++RLFP      FP + KK+L+++L+ +PL+  +    L   EG+T   + ++L
Sbjct: 77  HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQEL 136

Query: 553 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 413
              +    +A+W      Q +N  F+PP  RV ++N +  GW  +L+
Sbjct: 137 REKFWEFYKADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 183


>BC005064-1|AAH05064.1|  181|Homo sapiens FKSG24 protein protein.
          Length = 181

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
 Frame = -2

Query: 727 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 554
           HY+Y +++RLFP      FP + KK+L+++L+ +PL+  +  Y                 
Sbjct: 77  HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY----------------- 119

Query: 553 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 413
                   +A+W      Q +N  F+PP  RV ++N +  GW  +L+
Sbjct: 120 --------KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 158


>AF416712-1|AAL16806.1|  181|Homo sapiens unknown protein.
          Length = 181

 Score = 42.3 bits (95), Expect = 0.002
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
 Frame = -2

Query: 727 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 554
           HY+Y +++RLFP      FP + KK+L+++L+ +PL+  +  Y                 
Sbjct: 77  HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY----------------- 119

Query: 553 FALYLPVLEANWKWLTLFQVINLAFIPPMLRVLFMNIVGFGWAMFLA 413
                   +A+W      Q +N  F+PP  RV ++N +  GW  +L+
Sbjct: 120 --------KADWCVWPAAQFVNFLFVPPQFRVTYINGLTLGWDTYLS 158


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,724,078
Number of Sequences: 237096
Number of extensions: 2490257
Number of successful extensions: 7504
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7503
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10928473528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)