Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19g16f
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane pr... 64 5e-10
AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal memb... 64 5e-10
AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membr... 64 5e-10
BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein MG... 52 2e-06
BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein. 36 0.16
AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein. 36 0.16
AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens ... 31 3.4
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 31 5.9
>BC073997-1|AAH73997.1| 195|Homo sapiens peroxisomal membrane
protein 2, 22kDa protein.
Length = 195
Score = 64.1 bits (149), Expect = 5e-10
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +3
Query: 312 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 476
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 477 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 644
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 645 AALKQLFALYLPVLEANWKWLTLFQVINLAFIP 743
A ++ + P L NW+ T Q IN+ ++P
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPLQFININYVP 171
>AY044439-1|AAK95858.1| 195|Homo sapiens 22 kDa peroxisomal
membrane protein 2 protein.
Length = 195
Score = 64.1 bits (149), Expect = 5e-10
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +3
Query: 312 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 476
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 477 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 644
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 645 AALKQLFALYLPVLEANWKWLTLFQVINLAFIP 743
A ++ + P L NW+ T Q IN+ ++P
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPLQFININYVP 171
>AF250136-1|AAF73963.1| 195|Homo sapiens 22kDa peroxisomal membrane
protein-like protein.
Length = 195
Score = 64.1 bits (149), Expect = 5e-10
Identities = 48/153 (31%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Frame = +3
Query: 312 VASYLQNLYLHPIKTKAITSCVVGTAGSLASQIVAGE-----SIRLDPIXXXXXXXXXXX 476
+A YL L L+P+ TKA TS ++ G+ +Q++ + S LD
Sbjct: 22 LAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFF 81
Query: 477 XTVP--HYFYETVERLFPEESASFPLA--KKLLLERLIFAPLMQAFSLYSLARFEGKTHR 644
T P H+FY +E P E PLA ++LLL+RL+FAP + EGK
Sbjct: 82 FTGPLSHFFYFFMEHWIPPE---VPLAGLRRLLLDRLVFAPAFLMLFFLIMNFLEGKDAS 138
Query: 645 AALKQLFALYLPVLEANWKWLTLFQVINLAFIP 743
A ++ + P L NW+ T Q IN+ ++P
Sbjct: 139 AFAAKMRGGFWPALRMNWRVWTPLQFININYVP 171
>BC093008-1|AAH93008.1| 206|Homo sapiens hypothetical protein
MGC12972 protein.
Length = 206
Score = 52.4 bits (120), Expect = 2e-06
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +3
Query: 489 HYFYETVERLFPEESA-SFP-LAKKLLLERLIFAPLMQAFSLYSLARFEGKTHRAALKQL 662
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + L EG+T + ++L
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWYFLGLGCLEGQTVGESCQEL 136
Query: 663 FALYLPVLEANWKWLTLFQVINLAFIPP 746
+ +A+W Q +N F+PP
Sbjct: 137 REKFWEFYKADWCVWPAAQFVNFLFVPP 164
>BC005064-1|AAH05064.1| 181|Homo sapiens FKSG24 protein protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.16
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 489 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLY 611
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY 119
>AF416712-1|AAL16806.1| 181|Homo sapiens unknown protein.
Length = 181
Score = 35.9 bits (79), Expect = 0.16
Identities = 16/43 (37%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Frame = +3
Query: 489 HYFYETVERLFPEES-ASFP-LAKKLLLERLIFAPLMQAFSLY 611
HY+Y +++RLFP FP + KK+L+++L+ +PL+ + Y
Sbjct: 77 HYWYLSLDRLFPASGLRGFPNVLKKVLVDQLVASPLLGVWEFY 119
>AK124805-1|BAC85954.1| 189|Homo sapiens protein ( Homo sapiens
cDNA FLJ42815 fis, clone BRCAN2014143. ).
Length = 189
Score = 31.5 bits (68), Expect = 3.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = -3
Query: 150 YQCVCMYVVSYFLFFSDS*VCNYVHMYNYYLKFM*VFVYVPT 25
Y C+C+Y+ Y +C Y+H+Y Y ++ ++ Y+ T
Sbjct: 20 YPCICIYLHVYTY------ICMYIHIYPYLCMYVHIYPYICT 55
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 30.7 bits (66), Expect = 5.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -2
Query: 172 CTIKLSYISVCMYVRXXXXXXXXXXXSM*LCTYV*LLSQIYVGVCICTYCLVFNL 8
C Y+SVCMY+ S+ LC Y+ + + V VCIC C+ +L
Sbjct: 78 CVSVCVYVSVCMYLCVFLCVCVYVSVSVCLCVYLHISVYLCVYVCICV-CVSVSL 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,504,237
Number of Sequences: 237096
Number of extensions: 1797737
Number of successful extensions: 3120
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3109
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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