Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19g11r
         (806 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             29   0.051
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   1.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    25   1.1  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   4.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   5.8  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   5.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    22   5.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 29.1 bits (62), Expect = 0.051
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = -2

Query: 802  TRQNQNNRPGACERQHQLREEFTLPRQPRYRCHRPRMEQQWQHPDEPSHQ 653
            +++ Q  +P   ++Q Q ++     +QP+ +  +P+ +QQ Q   +P  Q
Sbjct: 1497 SQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQ 1546



 Score = 24.2 bits (50), Expect = 1.4
 Identities = 16/32 (50%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 764 TATSTP*GIHTT-APTEVPLSSSTDGTTMATP 672
           T  STP  + TT A T +P +S+T GT  ATP
Sbjct: 211 TDASTPATVTTTGATTTLPAASAT-GTGPATP 241


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 738 SHYRANRGTVVIVHGW 691
           S YR   GTVV++H W
Sbjct: 409 SGYRLTAGTVVLLHTW 424


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 11/41 (26%), Positives = 21/41 (51%)
 Frame = -3

Query: 183 SVRTNHLVGRRCGNIWEAELSNCNGGTLHMGNGNFGKRGSG 61
           ++ + H +  +C  +  +E  NCN G+L +   NF  +  G
Sbjct: 73  TITSYHRINLKCSLVEFSENKNCNAGSLTV-KKNFANKYCG 112


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -1

Query: 707 SSSTDGTTMATPR*TLS 657
           SSS  G TM+T R TLS
Sbjct: 228 SSSDSGVTMSTSRLTLS 244


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 378 WGGNSNALNRNAGHYVECI 322
           + GN N  + N   YVEC+
Sbjct: 48  YNGNVNVEDENVQSYVECM 66


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 723 NRGTVVIVHGWNNNG 679
           +RG V I+ GW  NG
Sbjct: 117 HRGLVSIIDGWELNG 131


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 21  FRKARRCEFSNRRGRIR 71
           F+   RC+ SN+R R R
Sbjct: 74  FKSLPRCQLSNKRDRSR 90


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -2

Query: 778 PGACERQHQLREEFTLPRQPRYRC 707
           P AC  +H++R    +P    + C
Sbjct: 519 PSACRPRHEIRSTDVIPGTQEHVC 542


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,114
Number of Sequences: 438
Number of extensions: 6478
Number of successful extensions: 23
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25610547
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)