Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19g10f
(766 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069164-1|AAL39309.1| 545|Drosophila melanogaster GH19483p pro... 143 2e-34
AE014298-2972|AAF45368.1| 545|Drosophila melanogaster CG9581-PA... 143 2e-34
AY061085-1|AAL28633.1| 491|Drosophila melanogaster LD07362p pro... 51 2e-06
AE014297-1514|AAF54806.2| 491|Drosophila melanogaster CG5663-PA... 51 2e-06
BT001331-1|AAN71086.1| 559|Drosophila melanogaster AT18731p pro... 36 0.046
AE014296-3710|AAN12200.1| 534|Drosophila melanogaster CG32454-P... 36 0.046
AY118979-1|AAM50839.1| 334|Drosophila melanogaster LP01850p pro... 32 0.99
AE014297-2488|AAF55527.1| 334|Drosophila melanogaster CG7142-PA... 32 0.99
AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p pro... 29 9.2
AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptio... 29 9.2
AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA ... 29 9.2
>AY069164-1|AAL39309.1| 545|Drosophila melanogaster GH19483p
protein.
Length = 545
Score = 143 bits (347), Expect = 2e-34
Identities = 76/173 (43%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Frame = +3
Query: 264 QGTFGQATCHTHPHLIQQGHLTCGITQKEYAERRETLISRLVSEAP------NVHKT--H 419
+G GQ T +HPHLIQ L G+ E ERR L+ + + A N H + H
Sbjct: 64 KGNLGQPTSVSHPHLIQPDELVPGVELTEIKERRSQLMQNIRAYARSFGGEFNGHSSSCH 123
Query: 420 IVVIPAARKQFMSDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKD 599
++V+ AA K++MS KIPYVFRQNSDF+YLTGCLEP A+L ++ + +S LF+ KD
Sbjct: 124 MLVLGAASKKYMSGKIPYVFRQNSDFYYLTGCLEPDAVL-LLTIDEAQNVQSELFMRPKD 182
Query: 600 SHAELWEGPRTGCTAATQLFAVDEARPVDSFSVYINKLAASSKPSVLWYHNEA 758
HAELW+GPRTG A LF V EA P+ + K A + KP + W+ ++
Sbjct: 183 PHAELWDGPRTGPELAVPLFGVTEAHPLSQLEAVLAKRAGALKPHI-WFDQKS 234
>AE014298-2972|AAF45368.1| 545|Drosophila melanogaster CG9581-PA
protein.
Length = 545
Score = 143 bits (347), Expect = 2e-34
Identities = 76/173 (43%), Positives = 103/173 (59%), Gaps = 8/173 (4%)
Frame = +3
Query: 264 QGTFGQATCHTHPHLIQQGHLTCGITQKEYAERRETLISRLVSEAP------NVHKT--H 419
+G GQ T +HPHLIQ L G+ E ERR L+ + + A N H + H
Sbjct: 64 KGNLGQPTSVSHPHLIQPDELVPGVELTEIKERRSQLMQNIRAYARSFGGEFNGHSSSCH 123
Query: 420 IVVIPAARKQFMSDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKD 599
++V+ AA K++MS KIPYVFRQNSDF+YLTGCLEP A+L ++ + +S LF+ KD
Sbjct: 124 MLVLGAASKKYMSGKIPYVFRQNSDFYYLTGCLEPDAVL-LLTIDEAQNVQSELFMRPKD 182
Query: 600 SHAELWEGPRTGCTAATQLFAVDEARPVDSFSVYINKLAASSKPSVLWYHNEA 758
HAELW+GPRTG A LF V EA P+ + K A + KP + W+ ++
Sbjct: 183 PHAELWDGPRTGPELAVPLFGVTEAHPLSQLEAVLAKRAGALKPHI-WFDQKS 234
>AY061085-1|AAL28633.1| 491|Drosophila melanogaster LD07362p
protein.
Length = 491
Score = 50.8 bits (116), Expect = 2e-06
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 420 IVVIPAARKQFM-SDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEK 596
+V++ + Q + + + YVFRQ S F YL G EP ++ + KSVLFV
Sbjct: 44 LVLLEGGKDQSLYNTDVDYVFRQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFVPRF 103
Query: 597 DSHAELWEGPRTGCTAATQLFAVDEARPVDSFSVYI 704
W G G ++ VDE VD SVY+
Sbjct: 104 PDEYGTWMGELLGLQEFKAMYEVDEVFYVDEMSVYL 139
>AE014297-1514|AAF54806.2| 491|Drosophila melanogaster CG5663-PA
protein.
Length = 491
Score = 50.8 bits (116), Expect = 2e-06
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 420 IVVIPAARKQFM-SDKIPYVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEK 596
+V++ + Q + + + YVFRQ S F YL G EP ++ + KSVLFV
Sbjct: 44 LVLLEGGKDQSLYNTDVDYVFRQESYFQYLFGVKEPGCYGILTIDVKTGAQKSVLFVPRF 103
Query: 597 DSHAELWEGPRTGCTAATQLFAVDEARPVDSFSVYI 704
W G G ++ VDE VD SVY+
Sbjct: 104 PDEYGTWMGELLGLQEFKAMYEVDEVFYVDEMSVYL 139
>BT001331-1|AAN71086.1| 559|Drosophila melanogaster AT18731p
protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.046
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 471 YVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKDS 602
Y FRQ DF YL CL P A LV+ + +T + + DS
Sbjct: 161 YPFRQRPDFLYLCDCLRPGAALVLTRSRKRNTGALLFLSQDVDS 204
>AE014296-3710|AAN12200.1| 534|Drosophila melanogaster CG32454-PA
protein.
Length = 534
Score = 36.3 bits (80), Expect = 0.046
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 471 YVFRQNSDFFYLTGCLEPSAILVMIKPAHSDTFKSVLFVHEKDS 602
Y FRQ DF YL CL P A LV+ + +T + + DS
Sbjct: 136 YPFRQRPDFLYLCDCLRPGAALVLTRSRKRNTGALLFLSQDVDS 179
>AY118979-1|AAM50839.1| 334|Drosophila melanogaster LP01850p
protein.
Length = 334
Score = 31.9 bits (69), Expect = 0.99
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 506 KIEKVRILSKHIRYFIRHELFAGSWDYYNMCFVHIR 399
K E I +HI Y++RHEL+ G + Y++ ++ +
Sbjct: 149 KGEASNIQMRHIDYYVRHELYLGGVNPYDIALIYTK 184
>AE014297-2488|AAF55527.1| 334|Drosophila melanogaster CG7142-PA
protein.
Length = 334
Score = 31.9 bits (69), Expect = 0.99
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = -3
Query: 506 KIEKVRILSKHIRYFIRHELFAGSWDYYNMCFVHIR 399
K E I +HI Y++RHEL+ G + Y++ ++ +
Sbjct: 149 KGEASNIQMRHIDYYVRHELYLGGVNPYDIALIYTK 184
>AY122256-1|AAM52768.1| 1153|Drosophila melanogaster SD07343p
protein.
Length = 1153
Score = 28.7 bits (61), Expect = 9.2
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 165 HKLLKSHIRNQLRCLSTIDHPPGAVERPTLSIPQGTFGQATCHTHPHLIQQGHL 326
H L H +QL S+I PP ++ IP A H HPHL HL
Sbjct: 205 HGLHPGHQHSQLSAASSI--PPSSI-----GIPPTLSTMAPSHMHPHLHPHAHL 251
>AF475087-1|AAL78679.1| 1985|Drosophila melanogaster transcriptional
corepressor Atro protein.
Length = 1985
Score = 28.7 bits (61), Expect = 9.2
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +3
Query: 165 HKLLKSHIRNQLRCLSTIDHPPGAVERPTLSIPQGTFGQATCHTHPHLIQQGHL 326
H L H +QL S+I PP ++ IP A H HPHL HL
Sbjct: 1037 HGLHPGHQHSQLSAASSI--PPSSI-----GIPPTLSTMAPSHMHPHLHPHAHL 1083
>AE014296-517|AAF47693.2| 753|Drosophila melanogaster CG9973-PA
protein.
Length = 753
Score = 28.7 bits (61), Expect = 9.2
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 213 TIDHPPGAVERPTLSIPQGTFG-QATCHTHPHLIQQGHLTCGITQKEYAERR 365
T++HPP + PT++I T H H H +C + Q + +R
Sbjct: 602 TLNHPPMTLPPPTITITPTTHNHNHQNHNHNHSNDNNSSSCSLFQSKKKRKR 653
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,948,952
Number of Sequences: 53049
Number of extensions: 747704
Number of successful extensions: 1941
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1937
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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