Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19g09f
         (792 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70874-1|AAB09592.1|  666|Drosophila melanogaster hepatocyte nuc...    33   0.34 
BT003533-1|AAO39537.1|  704|Drosophila melanogaster RE09535p pro...    33   0.34 
BT001800-1|AAN71555.1|  738|Drosophila melanogaster RH29074p pro...    33   0.34 
AE014134-1555|AAF52703.1|  666|Drosophila melanogaster CG9310-PC...    33   0.34 
AE014134-1554|AAN10680.1|  732|Drosophila melanogaster CG9310-PB...    33   0.34 
AE014134-1553|AAF52702.2|  704|Drosophila melanogaster CG9310-PA...    33   0.34 
BT001388-1|AAN71143.1|  457|Drosophila melanogaster GH04863p pro...    32   0.78 
AE014296-802|AAN11595.1|  457|Drosophila melanogaster CG14997-PB...    32   0.78 
AE014296-801|AAF47867.1|  457|Drosophila melanogaster CG14997-PA...    32   0.78 

>U70874-1|AAB09592.1|  666|Drosophila melanogaster hepatocyte
           nuclear factor 4 homologprotein.
          Length = 666

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 23/60 (38%), Positives = 32/60 (53%)
 Frame = -2

Query: 584 VNALVSIQHTISGASELTHYTSELTHRHSPLSFSPDFLSGSRFRSGGRFCEVLLLLEPVL 405
           + ALV       G +E  H    L  RH  L+   D++S  ++ S GRF E+LL+L PVL
Sbjct: 344 IKALVFFDPNAKGLNE-PHRIKSL--RHQILNNLEDYISDRQYESRGRFGEILLIL-PVL 399


>BT003533-1|AAO39537.1|  704|Drosophila melanogaster RE09535p
           protein.
          Length = 704

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 23/60 (38%), Positives = 32/60 (53%)
 Frame = -2

Query: 584 VNALVSIQHTISGASELTHYTSELTHRHSPLSFSPDFLSGSRFRSGGRFCEVLLLLEPVL 405
           + ALV       G +E  H    L  RH  L+   D++S  ++ S GRF E+LL+L PVL
Sbjct: 382 IKALVFFDPNAKGLNE-PHRIKSL--RHQILNNLEDYISDRQYESRGRFGEILLIL-PVL 437


>BT001800-1|AAN71555.1|  738|Drosophila melanogaster RH29074p
           protein.
          Length = 738

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 23/60 (38%), Positives = 32/60 (53%)
 Frame = -2

Query: 584 VNALVSIQHTISGASELTHYTSELTHRHSPLSFSPDFLSGSRFRSGGRFCEVLLLLEPVL 405
           + ALV       G +E  H    L  RH  L+   D++S  ++ S GRF E+LL+L PVL
Sbjct: 416 IKALVFFDPNAKGLNE-PHRIKSL--RHQILNNLEDYISDRQYESRGRFGEILLIL-PVL 471


>AE014134-1555|AAF52703.1|  666|Drosophila melanogaster CG9310-PC,
           isoform C protein.
          Length = 666

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 23/60 (38%), Positives = 32/60 (53%)
 Frame = -2

Query: 584 VNALVSIQHTISGASELTHYTSELTHRHSPLSFSPDFLSGSRFRSGGRFCEVLLLLEPVL 405
           + ALV       G +E  H    L  RH  L+   D++S  ++ S GRF E+LL+L PVL
Sbjct: 344 IKALVFFDPNAKGLNE-PHRIKSL--RHQILNNLEDYISDRQYESRGRFGEILLIL-PVL 399


>AE014134-1554|AAN10680.1|  732|Drosophila melanogaster CG9310-PB,
           isoform B protein.
          Length = 732

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 23/60 (38%), Positives = 32/60 (53%)
 Frame = -2

Query: 584 VNALVSIQHTISGASELTHYTSELTHRHSPLSFSPDFLSGSRFRSGGRFCEVLLLLEPVL 405
           + ALV       G +E  H    L  RH  L+   D++S  ++ S GRF E+LL+L PVL
Sbjct: 410 IKALVFFDPNAKGLNE-PHRIKSL--RHQILNNLEDYISDRQYESRGRFGEILLIL-PVL 465


>AE014134-1553|AAF52702.2|  704|Drosophila melanogaster CG9310-PA,
           isoform A protein.
          Length = 704

 Score = 33.5 bits (73), Expect = 0.34
 Identities = 23/60 (38%), Positives = 32/60 (53%)
 Frame = -2

Query: 584 VNALVSIQHTISGASELTHYTSELTHRHSPLSFSPDFLSGSRFRSGGRFCEVLLLLEPVL 405
           + ALV       G +E  H    L  RH  L+   D++S  ++ S GRF E+LL+L PVL
Sbjct: 382 IKALVFFDPNAKGLNE-PHRIKSL--RHQILNNLEDYISDRQYESRGRFGEILLIL-PVL 437


>BT001388-1|AAN71143.1|  457|Drosophila melanogaster GH04863p
           protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 0.78
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 512 THRHSPLSFSPDFLSGSRFRSGGRFCEVLLL 420
           TH H+P +FS  FLS SR     + C+VL++
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQVLVV 49


>AE014296-802|AAN11595.1|  457|Drosophila melanogaster CG14997-PB,
           isoform B protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 0.78
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 512 THRHSPLSFSPDFLSGSRFRSGGRFCEVLLL 420
           TH H+P +FS  FLS SR     + C+VL++
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQVLVV 49


>AE014296-801|AAF47867.1|  457|Drosophila melanogaster CG14997-PA,
           isoform A protein.
          Length = 457

 Score = 32.3 bits (70), Expect = 0.78
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -2

Query: 512 THRHSPLSFSPDFLSGSRFRSGGRFCEVLLL 420
           TH H+P +FS  FLS SR     + C+VL++
Sbjct: 19  THNHAPTAFSTRFLSTSRVNRERQECQVLVV 49


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,308,834
Number of Sequences: 53049
Number of extensions: 534497
Number of successful extensions: 1042
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1042
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)