Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV19g05r
         (893 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    24   2.2  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    24   2.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   5.0  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   6.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    22   6.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.6  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    22   6.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 119 LKISHFYRIYKRPLILSHYLKKH 187
           +K   FYRIYKR +   H  K H
Sbjct: 413 MKDPAFYRIYKRIIDYYHSYKMH 435


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 119 LKISHFYRIYKRPLILSHYLKKH 187
           +K   FYRIYKR +   H  K H
Sbjct: 413 MKDPAFYRIYKRIIDYYHSYKMH 435


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 274 FYNISTYLIYFMYKFVYPFLYDFIKTV 194
           + N+S  + Y+ Y   +PF + FIK V
Sbjct: 288 YTNLSMTMKYYDYGADFPFNFAFIKNV 314


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -2

Query: 274 FYNISTYLIYFMYKFVYPFLYDFIKTV 194
           + N+S  + Y+ Y   +PF + FIK V
Sbjct: 288 YTNLSMTMKYYDYGADFPFNFAFIKNV 314


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 813 AGSTTGSETRPTEKIRRETQ 754
           A  TTG+ T PT ++R+  Q
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQ 271


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 890 TLLGIVNSRTHPIVFANXSPSXSRA 816
           T LG +NS  +P+++A  S    RA
Sbjct: 376 TWLGWINSGMNPVIYACWSRDFRRA 400


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 419 IFYVIIMCLQMVYLLIKI 366
           I+Y+II+   + YLL+ +
Sbjct: 113 IYYIIILAWALFYLLVSL 130


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 419 IFYVIIMCLQMVYLLIKI 366
           I+Y+II+   + YLL+ +
Sbjct: 166 IYYIIILAWALFYLLVSL 183


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -2

Query: 277 YFYNISTYLIYFMYKFVYPFLYDFIKTVY 191
           Y+ N++   IY++Y   YP  Y   K  +
Sbjct: 44  YYQNLNLGEIYYIYNPRYPLPYSGSKCTW 72


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 223 DIQIYT*SILSMLICYKNINLFISDLVR 306
           D+Q YT  I+ +L  +KN N     +V+
Sbjct: 64  DLQCYTTCIMKLLRTFKNGNFDFDMIVK 91


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,423
Number of Sequences: 438
Number of extensions: 4273
Number of successful extensions: 18
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)