Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV19g05f
(775 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089577-1|AAL90315.1| 328|Drosophila melanogaster RE10196p pro... 150 2e-36
AE014134-3201|AAF53873.2| 328|Drosophila melanogaster CG10747-P... 150 2e-36
AE014134-2143|AAN10799.1| 482|Drosophila melanogaster CG14945-P... 63 4e-10
AE014134-2142|AAF53153.1| 482|Drosophila melanogaster CG14945-P... 63 4e-10
AY071021-1|AAL48643.1| 453|Drosophila melanogaster RE10370p pro... 45 1e-04
AE014296-2618|AAF49549.2| 453|Drosophila melanogaster CG5895-PA... 45 1e-04
AY113552-1|AAM29557.1| 251|Drosophila melanogaster RH01011p pro... 31 1.8
M25545-4|AAA28621.1| 361|Drosophila melanogaster protein ( D.me... 29 5.4
M25545-3|AAA28624.1| 365|Drosophila melanogaster protein ( D.me... 29 5.4
M25545-2|AAA28623.1| 360|Drosophila melanogaster protein ( D.me... 29 5.4
M25545-1|AAA28622.1| 364|Drosophila melanogaster protein ( D.me... 29 5.4
M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protei... 29 5.4
AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p pro... 29 5.4
AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF... 29 5.4
AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD... 29 5.4
AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC... 29 5.4
AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB... 29 5.4
AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE... 29 5.4
AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA... 29 5.4
AE014134-1767|AAF52863.1| 237|Drosophila melanogaster CG13136-P... 29 7.1
>AY089577-1|AAL90315.1| 328|Drosophila melanogaster RE10196p
protein.
Length = 328
Score = 150 bits (363), Expect = 2e-36
Identities = 71/130 (54%), Positives = 92/130 (70%)
Frame = +1
Query: 379 ESWMSDLPIQLKDIPIIYLAIPGSHDSMTYGITKSSGLAPDAEPILHRLYPLFRGTILRW 558
+ WM DLP +L+D+ II LAIPGSH+SMTYGI S L+PDAE + R + F + RW
Sbjct: 4 DHWMRDLPSELRDLSIINLAIPGSHNSMTYGINSKSELSPDAEISIRRWHRFFPCFVRRW 63
Query: 559 TITQALDTKQQLLIGIRYLDLRIATKSGEDHFYFTHGVYAAEITEALKQVKEFVDEHPGE 738
+ TQ+ T QL +G+RY DLRIA K +D FY+ HG++A EI E L ++++FVD HP E
Sbjct: 64 SKTQSSGTLDQLELGVRYFDLRIAQK--DDKFYYCHGLFAMEIFEQLLEIRQFVDTHPEE 121
Query: 739 VVILDCQHFY 768
VVILD QHFY
Sbjct: 122 VVILDLQHFY 131
>AE014134-3201|AAF53873.2| 328|Drosophila melanogaster CG10747-PA
protein.
Length = 328
Score = 150 bits (363), Expect = 2e-36
Identities = 71/130 (54%), Positives = 92/130 (70%)
Frame = +1
Query: 379 ESWMSDLPIQLKDIPIIYLAIPGSHDSMTYGITKSSGLAPDAEPILHRLYPLFRGTILRW 558
+ WM DLP +L+D+ II LAIPGSH+SMTYGI S L+PDAE + R + F + RW
Sbjct: 4 DHWMRDLPSELRDLSIINLAIPGSHNSMTYGINSKSELSPDAEISIRRWHRFFPCFVRRW 63
Query: 559 TITQALDTKQQLLIGIRYLDLRIATKSGEDHFYFTHGVYAAEITEALKQVKEFVDEHPGE 738
+ TQ+ T QL +G+RY DLRIA K +D FY+ HG++A EI E L ++++FVD HP E
Sbjct: 64 SKTQSSGTLDQLELGVRYFDLRIAQK--DDKFYYCHGLFAMEIFEPLLEIRQFVDTHPEE 121
Query: 739 VVILDCQHFY 768
VVILD QHFY
Sbjct: 122 VVILDLQHFY 131
>AE014134-2143|AAN10799.1| 482|Drosophila melanogaster CG14945-PB,
isoform B protein.
Length = 482
Score = 63.3 bits (147), Expect = 4e-10
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = +1
Query: 385 WMSDLPIQLKDIPIIYLAIPGSHDSMTYGITKSSGLAPDAEPILHRLYPLFRGTILRWTI 564
WM+DL ++ ++ + L IPG+HDS +Y P+ +P+L + ++ +
Sbjct: 197 WMNDLKSKIGEMRLRDLFIPGTHDSGSY--------RPNFDPLLRE------SLVTKYAL 242
Query: 565 TQALDTKQQLLIGIRYLDLRIA-TKSGEDHFYFTHGVYAAE-ITEALKQVKEFVDEHPGE 738
TQ D + QL+ G+RYLD+R+ ++ D F+ HG+ + E + QV++FV E E
Sbjct: 243 TQDDDIRGQLMHGVRYLDIRVGYYRNSPDPFFIYHGITKQRPLQEVINQVRDFVYE-TNE 301
Query: 739 VVILDCQHF 765
++I + F
Sbjct: 302 IIIFGLKEF 310
>AE014134-2142|AAF53153.1| 482|Drosophila melanogaster CG14945-PA,
isoform A protein.
Length = 482
Score = 63.3 bits (147), Expect = 4e-10
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Frame = +1
Query: 385 WMSDLPIQLKDIPIIYLAIPGSHDSMTYGITKSSGLAPDAEPILHRLYPLFRGTILRWTI 564
WM+DL ++ ++ + L IPG+HDS +Y P+ +P+L + ++ +
Sbjct: 197 WMNDLKSKIGEMRLRDLFIPGTHDSGSY--------RPNFDPLLRE------SLVTKYAL 242
Query: 565 TQALDTKQQLLIGIRYLDLRIA-TKSGEDHFYFTHGVYAAE-ITEALKQVKEFVDEHPGE 738
TQ D + QL+ G+RYLD+R+ ++ D F+ HG+ + E + QV++FV E E
Sbjct: 243 TQDDDIRGQLMHGVRYLDIRVGYYRNSPDPFFIYHGITKQRPLQEVINQVRDFVYE-TNE 301
Query: 739 VVILDCQHF 765
++I + F
Sbjct: 302 IIIFGLKEF 310
>AY071021-1|AAL48643.1| 453|Drosophila melanogaster RE10370p
protein.
Length = 453
Score = 44.8 bits (101), Expect = 1e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Frame = +1
Query: 556 WTITQALDTKQQLLIGIRYLDLRIA-----TKSGEDHFYFTH-GVYAAEITEALKQVKEF 717
+ + Q LD QL+ GIRYLDL I T++ D+F+ + + + L+ V++F
Sbjct: 185 YLVAQQLDVWSQLVFGIRYLDLSIGYKNMNTENDADNFWIANENMLITPLLTVLRDVRQF 244
Query: 718 VDEHPGEVVILDCQHF 765
V + GEVV+LD F
Sbjct: 245 V-KRSGEVVVLDFSSF 259
>AE014296-2618|AAF49549.2| 453|Drosophila melanogaster CG5895-PA
protein.
Length = 453
Score = 44.8 bits (101), Expect = 1e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Frame = +1
Query: 556 WTITQALDTKQQLLIGIRYLDLRIA-----TKSGEDHFYFTH-GVYAAEITEALKQVKEF 717
+ + Q LD QL+ GIRYLDL I T++ D+F+ + + + L+ V++F
Sbjct: 185 YLVAQQLDVWSQLVFGIRYLDLSIGYKNMNTENDADNFWIANENMLITPLLTVLRDVRQF 244
Query: 718 VDEHPGEVVILDCQHF 765
V + GEVV+LD F
Sbjct: 245 V-KRSGEVVVLDFSSF 259
>AY113552-1|AAM29557.1| 251|Drosophila melanogaster RH01011p
protein.
Length = 251
Score = 31.1 bits (67), Expect = 1.8
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 385 WMSDLPIQLKDIPIIYLAIPGSHDSMTY 468
WM+DL ++ ++ + L IPG+HDS +Y
Sbjct: 197 WMNDLKSKIGEMRLTDLFIPGTHDSGSY 224
>M25545-4|AAA28621.1| 361|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 361
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 26 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 74
>M25545-3|AAA28624.1| 365|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 365
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 30 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 78
>M25545-2|AAA28623.1| 360|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 360
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 25 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 73
>M25545-1|AAA28622.1| 364|Drosophila melanogaster protein (
D.melanogaster Hrb98DElocus encoding heterogeneous
nuclear ribonucleoproteinisoforms, exon 5. ).
Length = 364
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 29 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 77
>M15766-1|AAA70426.1| 365|Drosophila melanogaster unknown protein
protein.
Length = 365
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 30 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 78
>AY061448-1|AAL28996.1| 361|Drosophila melanogaster LD38464p
protein.
Length = 361
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 26 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 74
>AE014297-4248|AAN14144.1| 361|Drosophila melanogaster CG9983-PF,
isoform F protein.
Length = 361
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 26 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 74
>AE014297-4247|AAN14143.1| 361|Drosophila melanogaster CG9983-PD,
isoform D protein.
Length = 361
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 26 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 74
>AE014297-4246|AAN14142.1| 365|Drosophila melanogaster CG9983-PC,
isoform C protein.
Length = 365
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 30 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 78
>AE014297-4245|AAF56801.1| 365|Drosophila melanogaster CG9983-PB,
isoform B protein.
Length = 365
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 30 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 78
>AE014297-4244|AAN14141.1| 360|Drosophila melanogaster CG9983-PE,
isoform E protein.
Length = 360
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 25 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 73
>AE014297-4243|AAF56800.2| 364|Drosophila melanogaster CG9983-PA,
isoform A protein.
Length = 364
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -1
Query: 325 LKRSIIKGLATRARTRSKKHKVDAWNVVINLVCTKVHRLKALQGWAFIT 179
+++ I GL R + K + W ++++V K R K +G+ FIT
Sbjct: 29 MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFIT 77
>AE014134-1767|AAF52863.1| 237|Drosophila melanogaster CG13136-PA
protein.
Length = 237
Score = 29.1 bits (62), Expect = 7.1
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -3
Query: 296 YESQNEVKETQSRCLECR 243
YE QNEVK TQ L+CR
Sbjct: 208 YEVQNEVKTTQCNTLQCR 225
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,085,638
Number of Sequences: 53049
Number of extensions: 644315
Number of successful extensions: 1169
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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